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N
N
(in
rosetta.protocols.forge.build.SegmentInsertConnectionScheme
)
names
(in
MCA
)
non_const_pose()
(in
SymmOnTheFlyInteractionGraph
)
N
(in
Enum
)
names
(in
MoverStatus
)
non_hbonding_atom()
(in
HBAtom
)
N
(in
rosetta.protocols.forge.build.SegmentInsertConnectionScheme._protocols_forge_build_SegmentInsertConnectionScheme_
)
names
(in
StatsType
)
non_helix_in_membrane_penalty()
(in
MembranePotential
)
N()
(in
BB_Pos
)
names
(in
X11Colors
)
non_ideal()
(in
FastGapMover
)
n()
(in
FAElecContextData
)
names
(in
AddStatus
)
non_interface
(in
Type
)
N()
(in
BB_Pos
)
names
(in
DDG_Bind_File_Index
)
non_interface
(in
InterfaceInfo
)
n2c
(in
Direction
)
names
(in
OptEMultifuncMPIMessages
)
non_main_chain_sugar_coords()
(in
FullAtomRNA_Fragments
)
n2c
(in
rosetta.protocols.rigid._protocols_rigid_
)
names
(in
OptEPositionDataType
)
non_main_chain_sugar_coords_defined()
(in
FullAtomRNA_Fragments
)
n2c
(in
rosetta.protocols.rigid
)
names
(in
DaemonSetMessage
)
non_peptide_heavy_atom_RMSD()
(in
rosetta.core.scoring._core_scoring_
)
N_ACETYLATION
(in
rosetta
)
names
(in
PtType
)
non_virtual_score()
(in
CoordinateConstraint
)
N_ACETYLATION
(in
rosetta.core.chemical
)
names
(in
RBSegmentType
)
nonadduct_variants_match()
(in
rosetta.core.chemical._core_chemical_
)
N_ACETYLATION
(in
rosetta.core.chemical._core_chemical_
)
names
(in
Direction
)
NonaromaticBond
(in
rosetta
)
N_ACETYLATION
(in
VariantType
)
names
(in
Partner
)
NonaromaticBond
(in
rosetta.core.chemical
)
n_active_score_types()
(in
EnergyGraph
)
names
(in
PoseSelectorFlags
)
NonaromaticBond
(in
BondAromaticity
)
n_anchor()
(in
Rose
)
names
(in
OutputLevel
)
NonaromaticBond
(in
rosetta.core.chemical._core_chemical_
)
n_ang_U1D2_samples()
(in
ExternalGeomSampler
)
names
(in
Operation
)
noncanonical_atom_count()
(in
rosetta.core.pose._core_pose_
)
n_ang_U2D1_samples()
(in
ExternalGeomSampler
)
names
(in
DisulfideCyclizationViability
)
noncanonical_chi_count()
(in
rosetta.core.pose._core_pose_
)
n_atom()
(in
AtomID_Map_T_bool_T
)
names
(in
Chirality
)
noncanonical_residue_count()
(in
rosetta.core.pose._core_pose_
)
n_atom()
(in
AtomID_Map_T_core_id_AtomID_T
)
names
(in
PhosphateTerminus
)
nonchitip_atom()
(in
UpstreamResTypeGeometry
)
n_atom()
(in
AtomID_Map_T_double_T
)
names
(in
AttachmentType
)
nonchitip_atoms()
(in
UpstreamResTypeGeometry
)
n_atom()
(in
AtomID_Map_T_numeric_xyzVector_T_double_T__T
)
names
(in
MoveType
)
nonconst_atom_numbers_for_mg_calculation()
(in
RNA_ScoringInfo
)
n_atom()
(in
NamedAtomID_Map_T_core_id_NamedAtomID_T
)
names
(in
StepWiseSamplerType
)
nonconst_atom_numbers_for_vdw_calculation()
(in
RNA_ScoringInfo
)
n_atom()
(in
Atom
)
names
(in
StepWiseScreenerType
)
nonconst_begin()
(in
ConstantLengthFragSet
)
n_atom()
(in
Atom_
)
names
(in
ExternalTransform
)
nonconst_begin()
(in
FragSet
)
N_atom_id()
(in
UpstreamResTypeGeometry
)
names
(in
boolean_operations
)
nonconst_begin()
(in
FragSetCollection
)
n_atoms()
(in
DecoySetEvaluation
)
names
(in
ClaimRight
)
nonconst_begin()
(in
OrderedFragSet
)
n_atoms()
(in
InteratomicVarianceMatrix
)
names
(in
WUM_MPI_TAGS
)
nonconst_cenlist_from_pose()
(in
EnvPairPotential
)
n_atoms_for_restype()
(in
TargetRotamerCoords
)
names
(in
simulate_mpi_message_type
)
nonconst_data_ptr()
(in
Residue
)
n_atomtypes()
(in
AtomTypeSet
)
names
(in
e
)
nonconst_downstream_algorithms()
(in
Matcher
)
n_atomtypes()
(in
MMAtomTypeSet
)
names
(in
e
)
nonconst_end()
(in
ConstantLengthFragSet
)
n_atomtypes()
(in
Etable
)
names_vector()
(in
DecomposeAndReweightEnergiesCalculator
)
nonconst_end()
(in
FragSet
)
n_bin_transition_data()
(in
BinTransitionCalculator
)
NAND
(in
rosetta.protocols.filters
)
nonconst_end()
(in
FragSetCollection
)
n_bins_i()
(in
BinTransitionData
)
NAND
(in
rosetta.protocols.filters._protocols_filters_
)
nonconst_end()
(in
OrderedFragSet
)
n_bins_iplus1()
(in
BinTransitionData
)
NAND
(in
boolean_operations
)
nonconst_full_model_info()
(in
rosetta.core.pose.full_model_info._core_pose_full_model_info_
)
n_bonded_neighbor_all_res()
(in
Residue
)
NAND
(in
rosetta.protocols.toolbox.task_operations
)
nonconst_interface_from_pose()
(in
InterchainPotential
)
n_branches()
(in
CarbohydrateInfo
)
NAND
(in
rosetta.protocols.toolbox.task_operations._protocols_toolbox_task_operations_
)
nonconst_is_magnesium()
(in
RNA_ScoringInfo
)
n_build_sets()
(in
ProteinUpstreamBuilder
)
NAND
(in
boolean_operations
)
nonconst_long_range_container()
(in
Energies
)
n_ca()
(in
ClosureProblem
)
nangles()
(in
BBTorsionAndAnglesSRFD
)
nonconst_Membrane_FAEmbed_from_pose()
(in
rosetta.core.scoring._core_scoring_
)
n_ca_c()
(in
ClosureProblem
)
nangles()
(in
MinimizerMap
)
nonconst_MembraneEmbed_from_pose()
(in
rosetta.core.scoring._core_scoring_
)
n_carbons()
(in
CarbohydrateInfo
)
nangles()
(in
SimpleDerivCheckResult
)
nonconst_MembraneTopology_from_pose()
(in
rosetta.core.scoring._core_scoring_
)
n_chain_directions
(in
ChainDirection
)
nangles()
(in
SymMinimizerMap
)
nonconst_other_struct_list()
(in
SilentStruct
)
n_chain_directions
(in
rosetta.protocols.loops.loop_closure.ccd._protocols_loops_loop_closure_ccd_
)
nargs()
(in
FunctionToken
)
nonconst_resA()
(in
EnzConstraintParameters
)
n_chain_directions
(in
rosetta.protocols.loops.loop_closure.ccd
)
NaryExpression
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
nonconst_resB()
(in
EnzConstraintParameters
)
n_children()
(in
Atom
)
NaryExpressionAP
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
nonconst_residue_task()
(in
PackerTask
)
n_children()
(in
Atom_
)
NaryExpressionCAP
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
nonconst_residue_task()
(in
PackerTask_
)
n_ci_2b_score_types
(in
ScoreType
)
NATAA
(in
rosetta.core.pack.task._core_pack_task_
)
nonconst_residue_type_set()
(in
ChemicalManager
)
n_ci_2b_score_types
(in
rosetta.core.scoring._core_scoring_
)
NATAAAP
(in
rosetta.core.pack.task._core_pack_task_
)
nonconst_residue_type_set_op()
(in
ChemicalManager
)
n_ci_2b_score_types
(in
rosetta.core.scoring
)
NATAACAP
(in
rosetta.core.pack.task._core_pack_task_
)
nonconst_rna_scoring_info_from_pose()
(in
rosetta.core.scoring.rna._core_scoring_rna_
)
n_ci_2b_score_types
(in
rosetta
)
natbias_hh
(in
ScoreType
)
nonconst_rna_task()
(in
ResidueLevelTask
)
n_closure_attempts_is_a_maximum()
(in
GeneralizedKIC
)
natbias_hh
(in
rosetta.core.scoring._core_scoring_
)
nonconst_rotamer()
(in
RotamerSetBase
)
n_collision_check_atoms()
(in
LigandConformer
)
natbias_hh
(in
rosetta.core.scoring
)
nonconst_rotamer()
(in
RotamerSet
)
n_columns()
(in
ABEGO_SS_Config
)
natbias_hh
(in
rosetta
)
nonconst_rotamer()
(in
RotamerSet_
)
n_connected_residues()
(in
CountPairDataGeneric
)
natbias_hs
(in
ScoreType
)
nonconst_rotamer()
(in
RotamerSubset
)
n_connection_pairs()
(in
MMBondAngleResidueTypeParam
)
natbias_hs
(in
rosetta.core.scoring._core_scoring_
)
nonconst_rotamer()
(in
SymmetricRotamerSet_
)
n_connpoints_for_entry()
(in
CPDataCorrespondence
)
natbias_hs
(in
rosetta.core.scoring
)
nonconst_rotamer()
(in
FlexbbRotamerSet
)
n_correctly_aligned_positions()
(in
rosetta.core.sequence._core_sequence_
)
natbias_hs
(in
rosetta
)
NonContinuousFrame
(in
rosetta.core.fragment._core_fragment_
)
n_daemon_set_messages
(in
DaemonSetMessage
)
natbias_ss
(in
ScoreType
)
NonContinuousFrameAP
(in
rosetta.core.fragment._core_fragment_
)
n_daemon_set_messages
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
natbias_ss
(in
rosetta.core.scoring._core_scoring_
)
NonContinuousFrameCAP
(in
rosetta.core.fragment._core_fragment_
)
n_daemon_set_messages
(in
rosetta.protocols.pack_daemon
)
natbias_ss
(in
rosetta.core.scoring
)
nondefault()
(in
ResidueType
)
n_decoys()
(in
DecoySetEvaluation
)
natbias_ss
(in
rosetta
)
None
(in
GasteigerAtomTypeData
)
n_decoys_max()
(in
DecoySetEvaluation
)
natbias_stwist
(in
ScoreType
)
None
(in
TypeDifference
)
n_dependencies()
(in
BuildInstruction
)
natbias_stwist
(in
rosetta.core.scoring._core_scoring_
)
NONE
(in
rosetta.protocols.antibody
)
n_dependencies()
(in
BuildManager
)
natbias_stwist
(in
rosetta.core.scoring
)
NONE
(in
AntibodyNumberingSchemeEnum
)
n_deriv_check_results()
(in
NumericalDerivCheckResult
)
natbias_stwist
(in
rosetta
)
NONE
(in
rosetta.protocols.antibody._protocols_antibody_
)
n_dis_U1D1_samples()
(in
ExternalGeomSampler
)
NatbiasHelicesSheetPotential
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
None
(in
PlaceProbeMover
)
n_disjoint_sets()
(in
DisjointSets
)
NatbiasHelicesSheetPotentialAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
None
(in
StructureOutputMode
)
n_dof()
(in
MDBase
)
NatbiasHelicesSheetPotentialCAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
rosetta.protocols.stepwise.modeler.rna.phosphate
)
n_elements()
(in
ElementSet
)
NatbiasHelixPairPotential
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
rosetta.protocols.stepwise.modeler.rna.phosphate._protocols_stepwise_modeler_rna_phosphate_
)
n_energy_method_types
(in
EnergyMethodType
)
NatbiasHelixPairPotentialAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
PhosphateTerminus
)
n_energy_method_types
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
NatbiasHelixPairPotentialCAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
rosetta.protocols.stepwise.screener
)
n_energy_method_types
(in
rosetta.core.scoring.methods
)
NatbiasSecondaryStructureEnergy
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
rosetta.protocols.stepwise.screener._protocols_stepwise_screener_
)
n_energy_methods
(in
EnergyMethods
)
NatbiasSecondaryStructureEnergyAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NONE
(in
StepWiseScreenerType
)
n_energy_methods
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
NatbiasSecondaryStructureEnergyCAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
none
(in
e
)
n_energy_methods
(in
rosetta.core.scoring.methods
)
NatbiasSecondaryStructureEnergyCreator
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
none
(in
TransactionMode
)
n_entries()
(in
CPDataCorrespondence
)
NatbiasSecondaryStructureEnergyCreatorAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
nonlocal
(in
rosetta.protocols.frag_picker
)
n_external_samplers()
(in
ClassicMatchAlgorithm
)
NatbiasSecondaryStructureEnergyCreatorCAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
nonlocal
(in
rosetta.protocols
)
n_external_transforms
(in
ExternalTransform
)
NatbiasStrandPairPotential
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
nonlocal_pairs()
(in
FragmentPicker
)
n_external_transforms
(in
rosetta.protocols.toolbox.match_enzdes_util._protocols_toolbox_match_enzdes_util_
)
NatbiasStrandPairPotentialAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
nonlocal_pairs_at_positions()
(in
FragmentPicker
)
n_external_transforms
(in
rosetta.protocols.toolbox.match_enzdes_util
)
NatbiasStrandPairPotentialCAP
(in
rosetta.protocols.fldsgn.potentials.sspot._protocols_fldsgn_potentials_sspot_
)
NonlocalContactsCalculator
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
n_fold_types
(in
SheetFoldType
)
native()
(in
MatchConstraintFileInfo
)
NonlocalContactsCalculatorAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
n_fold_types
(in
rosetta.protocols.fldsgn.topology._protocols_fldsgn_topology_
)
native_aa()
(in
PNatAAOptEPositionData
)
NonlocalContactsCalculatorCAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
n_fold_types
(in
rosetta.protocols.fldsgn.topology
)
native_alignment()
(in
StepWiseWorkingParameters
)
NonlocalFrags
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_fragment_eval()
(in
VallLibrarian
)
native_CA_gdtmm()
(in
rosetta.core.scoring._core_scoring_
)
NonlocalFrags_main()
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_fragment_gen()
(in
VallLibrarian
)
native_CA_rmsd()
(in
rosetta.core.scoring._core_scoring_
)
NonlocalFragsAP
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_geometric_constraints()
(in
Matcher
)
native_edensity_score_cutoff()
(in
StepWiseRNA_ModelerOptions
)
NonlocalFragsCAP
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_hbond_acceptors()
(in
ResidueType
)
native_loop_core_CA_rmsd()
(in
rosetta.protocols.loops._protocols_loops_
)
NonlocalPair
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_hbond_acceptors()
(in
Residue
)
native_pose()
(in
AlignEvaluator
)
NonlocalPairAP
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_hbond_donors()
(in
ResidueType
)
native_secstruct()
(in
NatbiasSecondaryStructureEnergy
)
NonlocalPairCAP
(in
rosetta.protocols.frag_picker.nonlocal._protocols_frag_picker_nonlocal_
)
n_hbond_donors()
(in
Residue
)
native_tag()
(in
BasicJob
)
nonmonotone()
(in
LineMinimizationAlgorithm
)
n_helices()
(in
BundleGridSampler
)
NativeEvaluatorCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
nonpivot_residues()
(in
ClosureProblem
)
n_helices()
(in
MakeBundle
)
NativeEvaluatorCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NonPlaidFingerprint
(in
rosetta.protocols.pockets._protocols_pockets_
)
n_helices()
(in
BundleParametersSet
)
NativeEvaluatorCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NonPlaidFingerprintAP
(in
rosetta.protocols.pockets._protocols_pockets_
)
n_kept_matches()
(in
BestMatchesCollection
)
NativeFallbackConfiguration
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
NonPlaidFingerprintCAP
(in
rosetta.protocols.pockets._protocols_pockets_
)
N_LINK_TYPES
(in
rosetta.core.scoring.carbohydrates
)
NativeFallbackConfigurationAP
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
NonResidueTypeConstraint
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
N_LINK_TYPES
(in
LinkageType
)
NativeFallbackConfigurationCAP
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
NonResidueTypeConstraintAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
N_LINK_TYPES
(in
rosetta.core.scoring.carbohydrates._core_scoring_carbohydrates_
)
NativeFallbackConfigurationCreator
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
NonResidueTypeConstraintCAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
n_long_range_types
(in
LongRangeEnergyType
)
NativeFallbackConfigurationCreatorAP
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
nonrotameric_chi_sample_wi_nrchi_bin
(in
ChiStrategy
)
n_long_range_types
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
NativeFallbackConfigurationCreatorCAP
(in
rosetta.basic.resource_manager.fallback_configuration._basic_resource_manager_fallback_configuration_
)
nonrotameric_chi_sample_wi_nrchi_bin
(in
rosetta.protocols.match.upstream._protocols_match_upstream_
)
n_long_range_types
(in
rosetta.core.scoring.methods
)
nativeness()
(in
PNatStructureOptEData
)
nonrotameric_chi_sample_wi_nrchi_bin
(in
rosetta.protocols.match.upstream
)
n_loops()
(in
LoopHashMap
)
nativeness_high()
(in
PNatStructureOptEData
)
nonrotameric_chi_sample_wi_nrchi_bin_to_lower_boundary
(in
ChiStrategy
)
n_mainchain_atoms()
(in
Residue
)
nativeness_low()
(in
PNatStructureOptEData
)
nonrotameric_chi_sample_wi_nrchi_bin_to_lower_boundary
(in
rosetta.protocols.match.upstream._protocols_match_upstream_
)
n_mainchain_torsions_i()
(in
BinTransitionData
)
natm()
(in
NormalMode
)
nonrotameric_chi_sample_wi_nrchi_bin_to_lower_boundary
(in
rosetta.protocols.match.upstream
)
n_mainchain_torsions_iplus1()
(in
BinTransitionData
)
natom()
(in
GoapRsdType
)
NonSequentialNeighborsFilter
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_pair_data
(in
min_pair_data
)
natom()
(in
SimplePDB
)
NonSequentialNeighborsFilterAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_pair_data
(in
rosetta.core.scoring._core_scoring_
)
natom()
(in
xyzStripeHash
)
NonSequentialNeighborsFilterCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_pair_data
(in
rosetta.core.scoring
)
natom()
(in
xyzStripeHashWithMeta_T_float_T
)
NonSequentialNeighborsFilterCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_pair_data
(in
rosetta
)
natom_aligned()
(in
rosetta.protocols.hybridization._protocols_hybridization_
)
NonSequentialNeighborsFilterCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_single_data
(in
min_single_data
)
natoms()
(in
ResidueType
)
NonSequentialNeighborsFilterCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
n_min_single_data
(in
rosetta.core.scoring._core_scoring_
)
natoms()
(in
Residue
)
nonzero_deltas()
(in
Jump
)
n_min_single_data
(in
rosetta.core.scoring
)
natoms()
(in
UltraLightResidue
)
nonzero_energies()
(in
ScoreMap
)
n_min_single_data
(in
rosetta
)
natoms()
(in
CartesianMinimizerMap
)
nonzero_hbond_weight()
(in
rosetta.core.scoring.hbonds._core_scoring_hbonds_
)
n_mutants()
(in
PointMutScanDriver
)
natoms()
(in
DOF_DataPoint
)
nonzero_weight_score_types()
(in
DecomposeAndReweightEnergiesCalculator
)
n_mutations()
(in
Mutant
)
natoms()
(in
DunbrackConstraint
)
nook_finder()
(in
VIP_Mover
)
n_nodes()
(in
DisjointSets
)
natoms()
(in
RotamerConstraint
)
NoOpStepWiseSampler
(in
rosetta.protocols.stepwise.sampler._protocols_stepwise_sampler_
)
n_non_polymeric_residue_connections()
(in
ResidueType
)
natoms()
(in
PDBInfo
)
NoOpStepWiseSamplerAP
(in
rosetta.protocols.stepwise.sampler._protocols_stepwise_sampler_
)
n_non_polymeric_residue_connections()
(in
Residue
)
natoms()
(in
AmbiguousConstraint
)
NoOpStepWiseSamplerCAP
(in
rosetta.protocols.stepwise.sampler._protocols_stepwise_sampler_
)
n_nonchitip_atoms_for_chi()
(in
UpstreamResTypeGeometry
)
natoms()
(in
AmbiguousNMRConstraint
)
nooutput()
(in
BaseJobDistributor
)
n_nonjump_children()
(in
Atom
)
natoms()
(in
AmbiguousNMRDistanceConstraint
)
NoOutputJobOutputter
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_nonjump_children()
(in
Atom_
)
natoms()
(in
AngleConstraint
)
NoOutputJobOutputterAP
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_npd_properties()
(in
DaemonSet
)
natoms()
(in
AtomPairConstraint
)
NoOutputJobOutputterCAP
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_nus()
(in
ResidueType
)
natoms()
(in
BackboneStubConstraint
)
NoOutputJobOutputterCreator
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_nus()
(in
Residue
)
natoms()
(in
BackboneStubLinearConstraint
)
NoOutputJobOutputterCreatorAP
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_optE_data_types
(in
OptEPositionDataType
)
natoms()
(in
BigBinConstraint
)
NoOutputJobOutputterCreatorCAP
(in
rosetta.protocols.jd2._protocols_jd2_
)
n_optE_data_types
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
natoms()
(in
ConstantConstraint
)
NOR
(in
rosetta.protocols.filters
)
n_optE_data_types
(in
rosetta.protocols.optimize_weights
)
natoms()
(in
Constraint
)
NOR
(in
rosetta.protocols.filters._protocols_filters_
)
n_orbitals()
(in
ResidueType
)
natoms()
(in
CoordinateConstraint
)
NOR
(in
boolean_operations
)
n_orbitals()
(in
Residue
)
natoms()
(in
DihedralConstraint
)
NOR
(in
rosetta.protocols.toolbox.task_operations
)
N_p_sp2
(in
rosetta.core.chemical.orbitals
)
natoms()
(in
DihedralPairConstraint
)
NOR
(in
rosetta.protocols.toolbox.task_operations._protocols_toolbox_task_operations_
)
N_p_sp2
(in
rosetta.core.chemical.orbitals._core_chemical_orbitals_
)
natoms()
(in
DistancePairConstraint
)
NOR
(in
boolean_operations
)
N_p_sp2
(in
orbital_type_enum
)
natoms()
(in
FabConstraint
)
NoRepackDisulfides
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_p_sp2
(in
OrbitalsStatistics
)
natoms()
(in
KofNConstraint
)
NoRepackDisulfidesAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_p_sp2
(in
orbital_type_name
)
natoms()
(in
LocalCoordinateConstraint
)
NoRepackDisulfidesCAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_parameters()
(in
ParametersSet
)
natoms()
(in
MultiConstraint
)
NoRepackDisulfidesCreator
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_parameters_sets()
(in
Conformation
)
natoms()
(in
NamedAngleConstraint
)
NoRepackDisulfidesCreatorAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_parameters_sets()
(in
SymmetricConformation
)
natoms()
(in
NamedAtomPairConstraint
)
NoRepackDisulfidesCreatorCAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_parameters_sets()
(in
ProtectedConformation
)
natoms()
(in
NonResidueTypeConstraint
)
NoResFilter
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_phi_bins()
(in
Ramachandran
)
natoms()
(in
ResidueTypeConstraint
)
NoResFilterAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
n_phi_bins()
(in
Ramachandran2B
)
natoms()
(in
ResidueTypeLinkingConstraint
)
NoResFilterCAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_pi_sp2
(in
rosetta.core.chemical.orbitals
)
natoms()
(in
SequenceProfileConstraint
)
NoResFilterCreator
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_pi_sp2
(in
rosetta.core.chemical.orbitals._core_chemical_orbitals_
)
natoms()
(in
SiteConstraint
)
NoResFilterCreatorAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_pi_sp2
(in
orbital_type_enum
)
natoms()
(in
SiteConstraintResidues
)
NoResFilterCreatorCAP
(in
rosetta.core.pack.task.operation._core_pack_task_operation_
)
N_pi_sp2
(in
OrbitalsStatistics
)
natoms()
(in
AmbiguousMultiConstraint
)
norm
(in
Quaternion_Real
)
N_pi_sp2
(in
orbital_type_name
)
natoms()
(in
BindingSiteConstraint
)
norm
(in
Quaternion_double
)
n_polymeric_residue_connections()
(in
ResidueType
)
natoms()
(in
COMCoordinateConstraint
)
norm
(in
Quaternion_float
)
n_polymeric_residue_connections()
(in
Residue
)
natoms()
(in
SequenceCoupling1BDConstraint
)
norm
(in
xyzTriple_Real
)
N_pos()
(in
ProteinBackboneBuildPoint
)
natoms()
(in
SequenceCouplingConstraint
)
norm
(in
xyzTriple_SSize
)
n_possible_hits_per_at3frame()
(in
DownstreamBuilder
)
natoms()
(in
UpstreamResTypeGeometry
)
norm
(in
xyzTriple_Size
)
n_possible_hits_per_at3frame()
(in
LigandConformerBuilder
)
natoms()
(in
PocketConstraint
)
norm
(in
xyzTriple_double
)
n_possible_hits_per_at3frame()
(in
RigidLigandBuilder
)
natoms_rmsd()
(in
StepWisePoseAligner
)
norm
(in
xyzTriple_float
)
n_possible_hits_per_upstream_conformation()
(in
ClassicMatchAlgorithm
)
natoms_superimpose_rmsd()
(in
StepWisePoseAligner
)
norm
(in
xyzVector_Real
)
n_possible_hits_per_upstream_conformation()
(in
DownstreamAlgorithm
)
NATRO
(in
rosetta.core.pack.task._core_pack_task_
)
norm
(in
xyzVector_SSize
)
n_possible_hits_per_upstream_conformation()
(in
SecondaryMatcherToDownstreamResidue
)
NATROAP
(in
rosetta.core.pack.task._core_pack_task_
)
norm
(in
xyzVector_Size
)
n_possible_hits_per_upstream_conformation()
(in
SecondaryMatcherToUpstreamResidue
)
NATROCAP
(in
rosetta.core.pack.task._core_pack_task_
)
norm
(in
xyzVector_double
)
n_possible_hits_per_upstream_conformation()
(in
WriteUpstreamCoordinateKinemage
)
nb_list()
(in
DnaInterfaceMinMover
)
norm
(in
xyzVector_float
)
n_ppo_torsion_bins
(in
rosetta.core.conformation._core_conformation_
)
nb_list()
(in
MinMover
)
norm()
(in
rosetta.numeric.kinematic_closure._numeric_kinematic_closure_
)
n_ppo_torsion_bins
(in
ppo_torsion_bin
)
nb_list()
(in
SymMinMover
)
norm_error
(in
Quaternion_Real
)
n_ppo_torsion_bins
(in
rosetta.core.conformation
)
nb_weight()
(in
HolesParams
)
norm_error
(in
Quaternion_double
)
n_ppo_torsion_bins
(in
rosetta
)
nbackbone_conformations()
(in
FlexbbRotamerSets
)
norm_error
(in
Quaternion_float
)
n_probe_radii
(in
ProbeRadius
)
nballs()
(in
PoseBalls
)
norm_factor()
(in
CentroidRotamerSampleData
)
n_probe_radii
(in
rosetta.protocols.match._protocols_match_
)
nballs()
(in
PoseBallsLite
)
norm_neg()
(in
BoltzmannFilter
)
n_probe_radii
(in
rosetta.protocols.match
)
nbb()
(in
BBTorsionSRFD
)
norm_squared
(in
Quaternion_Real
)
n_prof_tags
(in
ProfTag
)
nbb()
(in
SingleResidueDunbrackLibrary
)
norm_squared
(in
Quaternion_double
)
n_prof_tags
(in
rosetta.basic._basic_
)
nbb()
(in
TorsionFragment
)
norm_squared
(in
Quaternion_float
)
n_prof_tags
(in
rosetta.basic
)
nbbconfs_for_flexseg()
(in
FlexbbRotamerSets
)
norm_squared
(in
xyzTriple_Real
)
N_PROPERTIES
(in
rosetta
)
nbbconfs_for_moltenres()
(in
FlexbbRotamerSets
)
norm_squared
(in
xyzTriple_SSize
)
N_PROPERTIES
(in
rosetta.core.chemical
)
nbbconfs_for_res()
(in
FlexbbRotamerSets
)
norm_squared
(in
xyzTriple_Size
)
N_PROPERTIES
(in
rosetta.core.chemical._core_chemical_
)
nbcount()
(in
xyzStripeHash
)
norm_squared
(in
xyzTriple_double
)
N_PROPERTIES
(in
ResidueProperty
)
nbcount()
(in
xyzStripeHashWithMeta_T_float_T
)
norm_squared
(in
xyzTriple_float
)
n_proton_chi()
(in
ResidueType
)
nbcount_raw()
(in
xyzStripeHash
)
norm_squared
(in
xyzVector_Real
)
n_psi_bins()
(in
Ramachandran
)
nbhist()
(in
PoseBalls
)
norm_squared
(in
xyzVector_SSize
)
n_psi_bins()
(in
Ramachandran2B
)
nblist()
(in
Energies
)
norm_squared
(in
xyzVector_Size
)
n_pssms()
(in
NMerPSSMEnergy
)
nblist_auto_update()
(in
MinimizerOptions
)
norm_squared
(in
xyzVector_double
)
n_real_dofs()
(in
WrapperOptEMultifunc
)
nblist_dis2_cutoff_HH()
(in
Etable
)
norm_squared
(in
xyzVector_float
)
n_rebuild_tries()
(in
LoopRelaxMover
)
nblist_dis2_cutoff_HH()
(in
MMLJLibrary
)
norm_squared()
(in
EMapVector
)
n_req_res_in_seq()
(in
SecondaryStructureHasResidueFilter
)
nblist_dis2_cutoff_XH()
(in
Etable
)
norm_squared_error
(in
Quaternion_Real
)
n_rerelaxed()
(in
Scheduler
)
nblist_dis2_cutoff_XH()
(in
MMLJLibrary
)
norm_squared_error
(in
Quaternion_double
)
n_residue()
(in
Parameters
)
nblist_dis2_cutoff_XX()
(in
Etable
)
norm_squared_error
(in
Quaternion_float
)
n_residue()
(in
AtomID_Map_T_bool_T
)
nblist_dis2_cutoff_XX()
(in
MMLJLibrary
)
normal
(in
MEM
)
n_residue()
(in
AtomID_Map_T_core_id_AtomID_T
)
nblist_type()
(in
AnalyticEtableEnergy
)
normal
(in
rosetta.core.conformation.membrane._core_conformation_membrane_
)
n_residue()
(in
AtomID_Map_T_double_T
)
nblist_type()
(in
BaseEtableEnergy_T_core_scoring_etable_AnalyticEtableEnergy_T
)
normal
(in
rosetta.core.conformation.membrane
)
n_residue()
(in
AtomID_Map_T_numeric_xyzVector_T_double_T__T
)
nblist_type()
(in
BaseEtableEnergy_T_core_scoring_etable_TableLookupEtableEnergy_T
)
normal()
(in
MembraneEmbed
)
n_residue()
(in
NamedAtomID_Map_T_core_id_NamedAtomID_T
)
nblist_type()
(in
TableLookupEtableEnergy
)
normal()
(in
EmbeddingDef
)
n_residue()
(in
Pose
)
nbonds()
(in
ResidueType
)
normal_to_ellipsoid()
(in
EllipsoidalRandomizationMover
)
n_residue()
(in
BundleParameters
)
nbonds()
(in
PseudoBond
)
Normalize()
(in
Quaternion
)
n_residue_connections()
(in
ResidueType
)
nbonds_from_bb_atom()
(in
BuildSet
)
normalize()
(in
MolFileIOMolecule
)
n_residue_connections()
(in
Residue
)
nbr_atom()
(in
ResidueType
)
normalize()
(in
Quaternion_Real
)
n_residue_connections()
(in
MMBondAngleResidueTypeParam
)
nbr_atom()
(in
Residue
)
normalize()
(in
Quaternion_double
)
n_residue_connections_for_atom()
(in
ResidueType
)
nbr_atom_rmsd()
(in
rosetta.core.scoring._core_scoring_
)
normalize()
(in
Quaternion_float
)
n_residues()
(in
VallLibrary
)
nbr_atom_xyz()
(in
Residue
)
normalize()
(in
xyzTriple_Real
)
n_residues_for_entity()
(in
EntityCorrespondence
)
nbr_radius()
(in
ResidueType
)
normalize()
(in
xyzTriple_SSize
)
n_restypes()
(in
TargetRotamerCoords
)
nbr_radius()
(in
Residue
)
normalize()
(in
xyzTriple_Size
)
n_restypes_to_build()
(in
ProteinUpstreamBuilder
)
nbr_vertex()
(in
ResidueType
)
normalize()
(in
xyzTriple_double
)
n_restypes_to_build()
(in
UpstreamBuilder
)
nbrs()
(in
ResidueType
)
normalize()
(in
xyzTriple_float
)
n_rotamer_bins()
(in
SingleResidueDunbrackLibrary
)
nbrs()
(in
Residue
)
normalize()
(in
xyzVector_Real
)
n_rotamer_bins()
(in
SingleResiduePeptoidLibrary
)
nbrs()
(in
HBondSet
)
normalize()
(in
xyzVector_SSize
)
n_rotamer_bins_for_aa()
(in
SingleResidueDunbrackLibrary
)
nbrs1()
(in
ResPairMotif
)
normalize()
(in
xyzVector_Size
)
n_rotamer_bins_for_aa()
(in
SingleResiduePeptoidLibrary
)
nbrs2()
(in
ResPairMotif
)
normalize()
(in
xyzVector_double
)
n_rotamer_bins_for_aa_02()
(in
SingleResidueDunbrackLibrary
)
NC
(in
rosetta.core.pack.task._core_pack_task_
)
normalize()
(in
xyzVector_float
)
n_rotamer_bins_for_aa_02()
(in
SingleResiduePeptoidLibrary
)
NCAARotLibPath
(in
rosetta.core.chemical._core_chemical_
)
normalize_any()
(in
xyzTriple_Real
)
n_rotameric_bins_for_aa()
(in
SingleResidueDunbrackLibrary
)
NCAARotLibPathAP
(in
rosetta.core.chemical._core_chemical_
)
normalize_any()
(in
xyzTriple_SSize
)
n_rotameric_bins_for_aa()
(in
SingleResiduePeptoidLibrary
)
NCAARotLibPathCAP
(in
rosetta.core.chemical._core_chemical_
)
normalize_any()
(in
xyzTriple_Size
)
n_rotamers_for_restype()
(in
TargetRotamerCoords
)
NCaCaC_Dihedral_Func
(in
rosetta.core.scoring.disulfides._core_scoring_disulfides_
)
normalize_any()
(in
xyzTriple_double
)
n_rots_total()
(in
TargetRotamerCoords
)
NCaCaC_Dihedral_FuncAP
(in
rosetta.core.scoring.disulfides._core_scoring_disulfides_
)
normalize_any()
(in
xyzTriple_float
)
n_rows()
(in
ABEGO_SS_Config
)
NCaCaC_Dihedral_FuncCAP
(in
rosetta.core.scoring.disulfides._core_scoring_disulfides_
)
normalize_any()
(in
xyzVector_Real
)
n_sample()
(in
StepWiseProteinModelerOptions
)
NCAP
(in
rosetta.core.pack.task._core_pack_task_
)
normalize_any()
(in
xyzVector_SSize
)
n_sample()
(in
StepWiseMonteCarloOptions
)
ncap_prob_from_svm()
(in
HelixNCapperMover
)
normalize_any()
(in
xyzVector_Size
)
n_sample_rotamers()
(in
ContinuousRotamerSets
)
ncbb
(in
rosetta.core.pose
)
normalize_any()
(in
xyzVector_double
)
n_samples_per_chi()
(in
FullChiSampleSet
)
ncbb
(in
rosetta.protocols
)
normalize_any()
(in
xyzVector_float
)
n_samples_per_side_of_nrchi_bin()
(in
SampleStrategyData
)
ncbb_design_main_loop()
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_if_needed()
(in
Quaternion_Real
)
n_samples_wi_sd_range()
(in
SampleStrategyData
)
NcbbDockDesignProtocol
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_if_needed()
(in
Quaternion_double
)
n_score_types
(in
ScoreType
)
NcbbDockDesignProtocolAP
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_if_needed()
(in
Quaternion_float
)
n_score_types
(in
rosetta.core.scoring._core_scoring_
)
NcbbDockDesignProtocolCAP
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_or_zero()
(in
xyzTriple_Real
)
n_score_types
(in
rosetta.core.scoring
)
NcbbDockDesignProtocolCreator
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_or_zero()
(in
xyzTriple_SSize
)
n_score_types
(in
rosetta
)
NcbbDockDesignProtocolCreatorAP
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_or_zero()
(in
xyzTriple_Size
)
n_scores()
(in
VallLibrarian
)
NcbbDockDesignProtocolCreatorCAP
(in
rosetta.protocols.ncbb._protocols_ncbb_
)
normalize_or_zero()
(in
xyzTriple_double
)
n_secondary_structure_types
(in
SecondaryStructureType
)
NCCAP
(in
rosetta.core.pack.task._core_pack_task_
)
normalize_or_zero()
(in
xyzTriple_float
)
n_secondary_structure_types
(in
rosetta.protocols.loops.loop_closure.ccd._protocols_loops_loop_closure_ccd_
)
nchi()
(in
ResidueType
)
normalize_or_zero()
(in
xyzVector_Real
)
n_secondary_structure_types
(in
rosetta.protocols.loops.loop_closure.ccd
)
nchi()
(in
Residue
)
normalize_or_zero()
(in
xyzVector_SSize
)
n_seqs()
(in
CompositeSequence
)
nchi()
(in
DunbrackRotamerSampleData
)
normalize_or_zero()
(in
xyzVector_Size
)
n_shortranged_2b_score_types
(in
ScoreType
)
nchi()
(in
SingleResidueDunbrackLibrary
)
normalize_or_zero()
(in
xyzVector_double
)
n_shortranged_2b_score_types
(in
rosetta.core.scoring._core_scoring_
)
nchi()
(in
SingleResiduePeptoidLibrary
)
normalize_or_zero()
(in
xyzVector_float
)
n_shortranged_2b_score_types
(in
rosetta.core.scoring
)
nchi()
(in
UpstreamResTypeGeometry
)
normalized()
(in
xyzTriple_Real
)
n_shortranged_2b_score_types
(in
rosetta
)
ncluster()
(in
KClusterElement
)
normalized()
(in
xyzTriple_SSize
)
n_ss_types
(in
SSType
)
NcontactsCalculator
(in
rosetta.protocols.fldsgn._protocols_fldsgn_
)
normalized()
(in
xyzTriple_Size
)
n_ss_types
(in
rosetta.protocols.comparative_modeling.features._protocols_comparative_modeling_features_
)
NcontactsCalculatorAP
(in
rosetta.protocols.fldsgn._protocols_fldsgn_
)
normalized()
(in
xyzTriple_double
)
n_ss_types
(in
rosetta.protocols.comparative_modeling.features
)
NcontactsCalculatorCAP
(in
rosetta.protocols.fldsgn._protocols_fldsgn_
)
normalized()
(in
xyzTriple_float
)
n_svms()
(in
NMerSVMEnergy
)
NcontactsFilter
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized()
(in
xyzVector_Real
)
n_temp_levels()
(in
FixedTemperatureController
)
NcontactsFilterAP
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized()
(in
xyzVector_SSize
)
n_temp_levels()
(in
ParallelTempering
)
NcontactsFilterCAP
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized()
(in
xyzVector_Size
)
n_temp_levels()
(in
SimulatedTempering
)
NcontactsFilterCreator
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized()
(in
xyzVector_double
)
n_temp_levels()
(in
TemperatureController
)
NcontactsFilterCreatorAP
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized()
(in
xyzVector_float
)
n_temp_levels()
(in
TemperingBase
)
NcontactsFilterCreatorCAP
(in
rosetta.protocols.fldsgn.filters._protocols_fldsgn_filters_
)
normalized_any()
(in
xyzTriple_Real
)
n_to_gen()
(in
Scheduler
)
nContinuousSegments()
(in
RBSegment
)
normalized_any()
(in
xyzTriple_SSize
)
n_to_output_per_group()
(in
MatcherTask
)
nCPCrossoverBehaviors
(in
CPCrossoverBehavior
)
normalized_any()
(in
xyzTriple_Size
)
n_to_rerelax()
(in
Scheduler
)
nCPCrossoverBehaviors
(in
rosetta.core.scoring.etable.count_pair._core_scoring_etable_count_pair_
)
normalized_any()
(in
xyzTriple_double
)
n_top_natives_to_score()
(in
PNatStructureOptEData
)
nCPCrossoverBehaviors
(in
rosetta.core.scoring.etable.count_pair
)
normalized_any()
(in
xyzTriple_float
)
n_tor_U1D3_samples()
(in
ExternalGeomSampler
)
nCPResidueConnectionTypes
(in
CPResidueConnectionType
)
normalized_any()
(in
xyzVector_Real
)
n_tor_U2D2_samples()
(in
ExternalGeomSampler
)
nCPResidueConnectionTypes
(in
rosetta.core.scoring.etable.count_pair._core_scoring_etable_count_pair_
)
normalized_any()
(in
xyzVector_SSize
)
n_tor_U3D1_samples()
(in
ExternalGeomSampler
)
nCPResidueConnectionTypes
(in
rosetta.core.scoring.etable.count_pair
)
normalized_any()
(in
xyzVector_Size
)
n_torsion_bins
(in
TorsionBin
)
NCS_RESIDUE_MAPPING
(in
Enum
)
normalized_any()
(in
xyzVector_double
)
n_torsion_bins
(in
rosetta.protocols.comparative_modeling.features._protocols_comparative_modeling_features_
)
NCS_RESIDUE_MAPPING
(in
CacheableDataType
)
normalized_any()
(in
xyzVector_float
)
n_torsion_bins
(in
rosetta.protocols.comparative_modeling.features
)
NCSResMapping
(in
rosetta.protocols.simple_moves.symmetry._protocols_simple_moves_symmetry_
)
normalized_distance_in_degrees()
(in
CDRCluster
)
n_torsion_sets()
(in
SetTorsion
)
NCSResMappingAP
(in
rosetta.protocols.simple_moves.symmetry._protocols_simple_moves_symmetry_
)
normalized_or_zero()
(in
xyzTriple_Real
)
n_torsions()
(in
BackboneGridSamplerHelper
)
NCSResMappingCAP
(in
rosetta.protocols.simple_moves.symmetry._protocols_simple_moves_symmetry_
)
normalized_or_zero()
(in
xyzTriple_SSize
)
n_torsions_total()
(in
BackboneGridSamplerHelper
)
ncst()
(in
Rattle
)
normalized_or_zero()
(in
xyzTriple_Size
)
n_types()
(in
GasteigerAtomTypeSet
)
ncsts()
(in
EnzdesCstCache
)
normalized_or_zero()
(in
xyzTriple_double
)
N_VARIANTS
(in
rosetta
)
ncycle()
(in
DesignTask
)
normalized_or_zero()
(in
xyzTriple_float
)
N_VARIANTS
(in
rosetta.core.chemical
)
ndaemons()
(in
DaemonSet
)
normalized_or_zero()
(in
xyzVector_Real
)
N_VARIANTS
(in
rosetta.core.chemical._core_chemical_
)
ndft()
(in
rosetta.core.scoring.fiber_diffraction._core_scoring_fiber_diffraction_
)
normalized_or_zero()
(in
xyzVector_SSize
)
N_VARIANTS
(in
VariantType
)
ndft_1d()
(in
rosetta.core.scoring.fiber_diffraction._core_scoring_fiber_diffraction_
)
normalized_or_zero()
(in
xyzVector_Size
)
n_virtual_atoms()
(in
ResidueType
)
ndihe()
(in
ResidueType
)
normalized_or_zero()
(in
xyzVector_double
)
n_virtual_atoms()
(in
Residue
)
ndim()
(in
HyperRectangle
)
normalized_or_zero()
(in
xyzVector_float
)
NA
(in
rosetta.protocols.antibody.clusters
)
ndim()
(in
KDTree
)
NORMALIZED_SUM
(in
rosetta.protocols.simple_filters
)
NA
(in
CDRClusterEnum
)
ndims()
(in
kiss_fftnd_state
)
NORMALIZED_SUM
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NA
(in
rosetta.protocols.antibody.clusters._protocols_antibody_clusters_
)
ndims()
(in
LexicographicalIterator
)
NORMALIZED_SUM
(in
Operation
)
na_ade
(in
AA
)
ndofs()
(in
CartesianMinimizerMap
)
NormalizedEvaluatedArchive
(in
rosetta.protocols.jd2.archive._protocols_jd2_archive_
)
na_ade
(in
rosetta.core.chemical._core_chemical_
)
nDoFs()
(in
BundleGridSamplerHelper
)
NormalizedEvaluatedArchiveAP
(in
rosetta.protocols.jd2.archive._protocols_jd2_archive_
)
na_ade
(in
rosetta.core.chemical
)
NE2_CONNECT
(in
rosetta
)
NormalizedEvaluatedArchiveCAP
(in
rosetta.protocols.jd2.archive._protocols_jd2_archive_
)
na_ade
(in
rosetta
)
NE2_CONNECT
(in
rosetta.core.chemical
)
normalizing_area()
(in
rosetta.core.scoring._core_scoring_
)
na_cyt
(in
AA
)
NE2_CONNECT
(in
rosetta.core.chemical._core_chemical_
)
normalmode
(in
rosetta.protocols
)
na_cyt
(in
rosetta.core.chemical._core_chemical_
)
NE2_CONNECT
(in
VariantType
)
NormalMode
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_cyt
(in
rosetta.core.chemical
)
near_interface
(in
Type
)
NormalModeAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_cyt
(in
rosetta
)
near_interface
(in
InterfaceInfo
)
NormalModeCAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_gua
(in
AA
)
nearby_atom_cut()
(in
InterGroupInterfaceByVectorSelector
)
NormalModeMinimizer
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_gua
(in
rosetta.core.chemical._core_chemical_
)
nearby_atom_cut()
(in
DomainInterfaceFilter
)
NormalModeMinimizerAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_gua
(in
rosetta.core.chemical
)
nearby_atom_cutoff()
(in
RestrictInterGroupVectorOperation
)
NormalModeMinimizerCAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_gua
(in
rosetta
)
nearby_atom_cutoff()
(in
RestrictToInterfaceVectorOperation
)
NormalModeMinimizerCreator
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rad
(in
AA
)
nearest_atom_for_constraint()
(in
rosetta.protocols.protein_interface_design.movers._protocols_protein_interface_design_movers_
)
NormalModeMinimizerCreatorAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rad
(in
rosetta.core.chemical._core_chemical_
)
nearest_neighbor()
(in
rosetta.numeric.kdtree._numeric_kdtree_
)
NormalModeMinimizerCreatorCAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rad
(in
rosetta.core.chemical
)
nearest_neighbors()
(in
rosetta.numeric.kdtree._numeric_kdtree_
)
NormalModeMultifunc
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rad
(in
rosetta
)
nearest_ssize()
(in
rosetta.numeric._numeric_
)
NormalModeMultifuncAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rcy
(in
AA
)
NEED_TO_KNOW
(in
ClaimRight
)
NormalModeMultifuncCAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rcy
(in
rosetta.core.chemical._core_chemical_
)
NEED_TO_KNOW
(in
DofClaim
)
NormalModeRelaxMover
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rcy
(in
rosetta.core.chemical
)
negate()
(in
xyzTriple_Real
)
NormalModeRelaxMoverAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rcy
(in
rosetta
)
negate()
(in
xyzTriple_SSize
)
NormalModeRelaxMoverCAP
(in
rosetta.protocols.normalmode._protocols_normalmode_
)
na_rgu
(in
AA
)
negate()
(in
xyzTriple_Size
)
NORTH
(in
rosetta.core.chemical.rna
)
na_rgu
(in
rosetta.core.chemical._core_chemical_
)
negate()
(in
xyzTriple_double
)
NORTH
(in
rosetta.core.chemical.rna._core_chemical_rna_
)
na_rgu
(in
rosetta.core.chemical
)
negate()
(in
xyzTriple_float
)
NORTH
(in
PuckerState
)
na_rgu
(in
rosetta
)
negate()
(in
xyzVector_Real
)
North
(in
rosetta.protocols.antibody
)
na_thy
(in
AA
)
negate()
(in
xyzVector_SSize
)
North
(in
CDRDefinitionEnum
)
na_thy
(in
rosetta.core.chemical._core_chemical_
)
negate()
(in
xyzVector_Size
)
North
(in
rosetta.protocols.antibody._protocols_antibody_
)
na_thy
(in
rosetta.core.chemical
)
negate()
(in
xyzVector_double
)
NOT
(in
rosetta.protocols.filters
)
na_thy
(in
rosetta
)
negate()
(in
xyzVector_float
)
NOT
(in
rosetta.protocols.filters._protocols_filters_
)
na_ura
(in
AA
)
negate()
(in
Operator
)
NOT
(in
boolean_operations
)
na_ura
(in
rosetta.core.chemical._core_chemical_
)
negate()
(in
Sigmoid
)
NOT
(in
rosetta.protocols.toolbox.task_operations
)
na_ura
(in
rosetta.core.chemical
)
negated()
(in
xyzTriple_Real
)
NOT
(in
rosetta.protocols.toolbox.task_operations._protocols_toolbox_task_operations_
)
na_ura
(in
rosetta
)
negated()
(in
xyzTriple_SSize
)
NOT
(in
boolean_operations
)
naccess
(in
SasaRadii
)
negated()
(in
xyzTriple_Size
)
not_already_connected()
(in
rosetta.protocols.dna._protocols_dna_
)
naccess
(in
rosetta.core.scoring.sasa._core_scoring_sasa_
)
negated()
(in
xyzTriple_double
)
not_empty()
(in
ChainedSolutionList
)
naccess
(in
rosetta.core.scoring.sasa
)
negated()
(in
xyzTriple_float
)
not_end()
(in
JumpStepWiseSampler
)
NAIVE
(in
rosetta
)
negated()
(in
xyzVector_Real
)
not_end()
(in
MC_Comb
)
NAIVE
(in
rosetta.core.conformation
)
negated()
(in
xyzVector_SSize
)
not_end()
(in
MC_OneTorsion
)
NAIVE
(in
rosetta.core.conformation._core_conformation_
)
negated()
(in
xyzVector_Size
)
not_end()
(in
NoOpStepWiseSampler
)
NAIVE
(in
Strategy
)
negated()
(in
xyzVector_double
)
not_end()
(in
StepWiseSamplerAny
)
nali()
(in
VallResidue
)
negated()
(in
xyzVector_float
)
not_end()
(in
StepWiseSamplerBase
)
name()
(in
Column
)
negative_better()
(in
SequenceProfile
)
not_end()
(in
StepWiseSamplerComb
)
name()
(in
ResourceOptions
)
negln_rotprob()
(in
RotamerLibraryScratchSpace
)
not_end()
(in
StepWiseSamplerOneTorsion
)
name()
(in
Atom
)
neigh_count
(in
ScoreType
)
not_end()
(in
StepWiseSamplerOneValue
)
name()
(in
AtomType
)
neigh_count
(in
rosetta.core.scoring._core_scoring_
)
not_end()
(in
StepWiseSamplerOneValueComb
)
name()
(in
AtomTypeSet
)
neigh_count
(in
rosetta.core.scoring
)
not_end()
(in
StepWiseSamplerSized
)
name()
(in
MMAtomType
)
neigh_count
(in
rosetta
)
not_end()
(in
StepWiseSamplerSizedAny
)
name()
(in
Orbital
)
neigh_vect
(in
ScoreType
)
not_end()
(in
StepWiseSamplerSizedComb
)
name()
(in
Patch
)
neigh_vect
(in
rosetta.core.scoring._core_scoring_
)
not_end()
(in
CopyDofStepWiseSampler
)
name()
(in
ResidueType
)
neigh_vect
(in
rosetta.core.scoring
)
not_end()
(in
ResidueAlternativeStepWiseSampler
)
name()
(in
ResidueTypeSet
)
neigh_vect
(in
rosetta
)
not_end()
(in
ResidueAlternativeStepWiseSamplerComb
)
name()
(in
OrbitalType
)
neigh_vect_raw
(in
ScoreType
)
not_end()
(in
ResidueListStepWiseSampler
)
name()
(in
MolFileIOAtom
)
neigh_vect_raw
(in
rosetta.core.scoring._core_scoring_
)
not_end()
(in
InputStreamStepWiseSampler
)
name()
(in
MolFileIOMolecule
)
neigh_vect_raw
(in
rosetta.core.scoring
)
not_end()
(in
ProteinBetaAntiParallelStepWiseSampler
)
name()
(in
Residue
)
neigh_vect_raw
(in
rosetta
)
not_end()
(in
ProteinFragmentStepWiseSampler
)
name()
(in
EnvCore
)
neighbor
(in
rosetta.protocols
)
not_end()
(in
ProteinMainChainStepWiseSampler
)
name()
(in
RDAT
)
neighbor_count()
(in
PNatAAOptEPositionData
)
not_end()
(in
RigidBodyStepWiseSampler
)
name()
(in
SilentEnergy
)
neighbor_count()
(in
rosetta.protocols.sic_dock._protocols_sic_dock_
)
not_end()
(in
RigidBodyStepWiseSamplerWithResidueAlternatives
)
name()
(in
ALLAA
)
neighbor_counts()
(in
ContactCounts
)
not_end()
(in
RigidBodyStepWiseSamplerWithResidueList
)
name()
(in
ALLAAwc
)
neighbor_counts_exist()
(in
ContactCounts
)
not_end()
(in
RNA_ChiStepWiseSampler
)
name()
(in
ALLAAxc
)
neighbor_cutoff()
(in
ContextGraph
)
not_end()
(in
RNA_KIC_Sampler
)
name()
(in
APOLA
)
neighbor_cutoff()
(in
TenANeighborGraph
)
not_end()
(in
RNA_KinematicCloser
)
name()
(in
APOLAR
)
neighbor_cutoff()
(in
TwelveANeighborGraph
)
not_end()
(in
RNA_MC_MultiSuite
)
name()
(in
AUTO
)
neighbor_cutoff()
(in
ddGMover
)
not_end()
(in
RNA_MC_Sugar
)
name()
(in
EMPTY
)
neighbor_cutoff()
(in
NonSequentialNeighborsFilter
)
not_end()
(in
RNA_MC_Suite
)
name()
(in
EX
)
neighbor_detection_dis()
(in
AntibodyDesignModeler
)
not_end()
(in
RNA_NucleosideStepWiseSampler
)
name()
(in
EX_CUTOFF
)
neighbor_detection_dis()
(in
AntibodySeqDesignTFCreator
)
not_end()
(in
RNA_SugarStepWiseSampler
)
name()
(in
FIX_HIS_TAUTOMER
)
neighbor_dis()
(in
AnchoredGraftMover
)
not_end()
(in
RNA_SuiteStepWiseSampler
)
name()
(in
NATAA
)
neighbor_distance()
(in
StemFinder
)
not_equal_length()
(in
xyzTriple_Real
)
name()
(in
NATRO
)
neighbor_hits()
(in
HitNeighborFinder
)
not_equal_length()
(in
xyzTriple_SSize
)
name()
(in
NC
)
neighbor_id()
(in
DenseNeighborConstIterator
)
not_equal_length()
(in
xyzTriple_Size
)
name()
(in
NOTAA
)
neighbor_id()
(in
DenseNeighborIterator
)
not_equal_length()
(in
xyzTriple_double
)
name()
(in
NO_ADDUCTS
)
neighbor_id()
(in
OneToAllNeighborConstIterator
)
not_equal_length()
(in
xyzTriple_float
)
name()
(in
PIKAA
)
neighbor_id()
(in
OneToAllNeighborIterator
)
not_equal_length()
(in
xyzVector_Real
)
name()
(in
PIKNA
)
neighbor_id()
(in
PeptideBondedNeighborConstIterator
)
not_equal_length()
(in
xyzVector_SSize
)
name()
(in
PIKRNA
)
neighbor_id()
(in
PeptideBondedNeighborIterator
)
not_equal_length()
(in
xyzVector_Size
)
name()
(in
POLAR
)
neighbor_id()
(in
ResidueNeighborConstIterator
)
not_equal_length()
(in
xyzVector_double
)
name()
(in
RESET
)
neighbor_id()
(in
ResidueNeighborIterator
)
not_equal_length()
(in
xyzVector_float
)
name()
(in
SCAN
)
neighbor_id()
(in
CstResNeighbConstIterator
)
not_in_pose()
(in
EnzCstTemplateResCache
)
name()
(in
TARGET
)
neighbor_id()
(in
CstResNeighbIterator
)
not_normalized()
(in
Quaternion_Real
)
name()
(in
USE_INPUT_SC
)
neighbor_id()
(in
CentroidDisulfideNeighborConstIterator
)
not_normalized()
(in
Quaternion_double
)
name()
(in
PDBInfo
)
neighbor_id()
(in
CentroidDisulfideNeighborIterator
)
not_normalized()
(in
Quaternion_float
)
name()
(in
ScoreFunction
)
neighbor_id()
(in
DisulfResNeighbConstIterator
)
not_universal_main()
(in
rosetta.protocols.jobdist._protocols_jobdist_
)
name()
(in
GoapRsdType
)
neighbor_id()
(in
DisulfResNeighbIterator
)
not_valid()
(in
Span
)
name()
(in
FormFactor
)
neighbor_id()
(in
DisulfideMatchingNeighborConstIterator
)
NOTAA
(in
rosetta.core.pack.task._core_pack_task_
)
name()
(in
ABEGO
)
neighbor_id()
(in
DisulfideMatchingNeighborIterator
)
NOTAAAP
(in
rosetta.core.pack.task._core_pack_task_
)
name()
(in
Polynomial_1d
)
neighbor_iterator_begin()
(in
DenseEnergyContainer
)
NOTAACAP
(in
rosetta.core.pack.task._core_pack_task_
)
name()
(in
FunctionToken
)
neighbor_iterator_begin()
(in
LREnergyContainer
)
NotConjugableBond
(in
rosetta
)
name()
(in
VariableExpression
)
neighbor_iterator_begin()
(in
OneToAllEnergyContainer
)
NotConjugableBond
(in
rosetta.core.chemical
)
name()
(in
VariableToken
)
neighbor_iterator_begin()
(in
PeptideBondedEnergyContainer
)
NotConjugableBond
(in
BondConjugability
)
name()
(in
Template
)
neighbor_iterator_begin()
(in
CstEnergyContainer
)
NotConjugableBond
(in
rosetta.core.chemical._core_chemical_
)
name()
(in
PeptideDeriverFilter
)
neighbor_iterator_begin()
(in
CentroidDisulfideEnergyContainer
)
note_coordinate_change_registered()
(in
AtomTree
)
name()
(in
Pool_Evaluator
)
neighbor_iterator_begin()
(in
DisulfideMatchingEnergyContainer
)
note_designed_residues()
(in
PDBOutput
)
name()
(in
Align_RmsdEvaluator
)
neighbor_iterator_begin()
(in
FullatomDisulfideEnergyContainer
)
note_has_pseudobonds()
(in
CPDataCorrespondence
)
name()
(in
Align_RotamerEvaluator
)
neighbor_iterator_end()
(in
DenseEnergyContainer
)
note_hit_geometry()
(in
OccupiedSpaceHash
)
name()
(in
CombinedConstraintEvaluator
)
neighbor_iterator_end()
(in
LREnergyContainer
)
note_long_range_interactions_exist()
(in
OnTheFlyEdge
)
name()
(in
ConstraintEvaluator
)
neighbor_iterator_end()
(in
OneToAllEnergyContainer
)
note_long_range_interactions_exist()
(in
SymmOnTheFlyEdge
)
name()
(in
ExposedHydrophobicsFilter
)
neighbor_iterator_end()
(in
PeptideBondedEnergyContainer
)
note_long_range_interactions_exist()
(in
OTFFlexbbEdge
)
name()
(in
DockingHighResFilter
)
neighbor_iterator_end()
(in
CstEnergyContainer
)
note_long_range_interactions_exist_for_edge()
(in
OnTheFlyInteractionGraph
)
name()
(in
DockingLowResFilter
)
neighbor_iterator_end()
(in
CentroidDisulfideEnergyContainer
)
note_long_range_interactions_exist_for_edge()
(in
SymmOnTheFlyInteractionGraph
)
name()
(in
CoMTrackerCM
)
neighbor_iterator_end()
(in
DisulfideMatchingEnergyContainer
)
note_long_range_interactions_exist_for_edge()
(in
OTFFlexbbInteractionGraph
)
name()
(in
ScriptCM
)
neighbor_iterator_end()
(in
FullatomDisulfideEnergyContainer
)
note_match_accepted()
(in
LimitHitsPerRotamerFilter
)
name()
(in
AlignEvaluator
)
neighbor_mass()
(in
TenANeighborNode
)
note_match_accepted()
(in
StateAccumulatingMatchFilter
)
name()
(in
MetaPoseEvaluator
)
neighbor_min()
(in
CDRGraftDesignOptions
)
note_output_match()
(in
MatchOutputTracker
)
name()
(in
PoseEvaluator
)
neighbor_min_add()
(in
CDRGraftDesignOptions
)
note_rpe_calculated()
(in
OnTheFlyInteractionGraph
)
name()
(in
SingleValuePoseEvaluator_T_double_T
)
neighbor_min_clear()
(in
CDRGraftDesignOptions
)
note_rpe_calculated()
(in
SymmOnTheFlyInteractionGraph
)
name()
(in
SingleValuePoseEvaluator_T_long_int_T
)
neighbor_separation()
(in
StemFinder
)
note_short_range_interactions_exist()
(in
OnTheFlyEdge
)
name()
(in
SingleValuePoseEvaluator_T_long_unsigned_int_T
)
neighbor_strands()
(in
StrandPairingSet
)
note_short_range_interactions_exist()
(in
SymmOnTheFlyEdge
)
name()
(in
TimeEvaluator
)
neighbor_weight()
(in
NVscore
)
note_short_range_interactions_exist_for_edge()
(in
OnTheFlyInteractionGraph
)
name()
(in
FullAtomRNA_Fragments
)
NeighborDependentTabooSamplingKinematicPerturber
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
note_short_range_interactions_exist_for_edge()
(in
SymmOnTheFlyInteractionGraph
)
name()
(in
ReportToDB
)
NeighborDependentTabooSamplingKinematicPerturberAP
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
note_state_substitution_accepted()
(in
FlexbbEdge
)
name()
(in
TrajectoryReportToDB
)
NeighborDependentTabooSamplingKinematicPerturberCAP
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
note_submatrix_accessed()
(in
DoubleLazyInteractionGraph
)
name()
(in
CalculatorFilter
)
NeighborDependentTorsionSamplingKinematicPerturber
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
note_submatrix_added()
(in
DoubleLazyInteractionGraph
)
name()
(in
CombinedFilter
)
NeighborDependentTorsionSamplingKinematicPerturberAP
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
note_vertex_reached()
(in
InteractionGraphBase
)
name()
(in
CompoundFilter
)
NeighborDependentTorsionSamplingKinematicPerturberCAP
(in
rosetta.protocols.loops.loop_closure.kinematic_closure._protocols_loops_loop_closure_kinematic_closure_
)
NotExpression
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
name()
(in
ContingentFilter
)
neighborhood_buns_polar_calc_name()
(in
BDR
)
NotExpressionAP
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
name()
(in
FalseFilter
)
neighborhood_calc()
(in
AnchorMoversData
)
NotExpressionCAP
(in
rosetta.numeric.expression_parser._numeric_expression_parser_
)
name()
(in
Filter
)
neighborhood_calc_name()
(in
BDR
)
notify_energy_change()
(in
EnergyDependentCalculator
)
name()
(in
IfThenFilter
)
NeighborhoodByDistanceCalculator
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
notify_energy_change()
(in
PoseMetricCalculator
)
name()
(in
MoveBeforeFilter
)
NeighborhoodByDistanceCalculatorAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
notify_structure_change()
(in
PoseMetricCalculator
)
name()
(in
ReplicateFilter
)
NeighborhoodByDistanceCalculatorCAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
notify_structure_change()
(in
StructureDependentCalculator
)
name()
(in
StochasticFilter
)
NeighborhoodResidueSelector
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelector
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
TimeFilter
)
NeighborhoodResidueSelectorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelectorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
TrueFilter
)
NeighborhoodResidueSelectorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelectorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
CoreDunbrackFilter
)
NeighborhoodResidueSelectorCreator
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelectorCreator
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
FragQualFilter
)
NeighborhoodResidueSelectorCreatorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelectorCreatorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
HSSTripletFilter
)
NeighborhoodResidueSelectorCreatorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
NotResidueSelectorCreatorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
name()
(in
HelixKinkFilter
)
NeighborList
(in
rosetta.core.scoring._core_scoring_
)
nparams()
(in
Scheduler
)
name()
(in
HelixPairingFilter
)
NeighborListAP
(in
rosetta.core.scoring._core_scoring_
)
npd_properties()
(in
MultistateFitnessFunction
)
name()
(in
InterlockingAromaFilter
)
NeighborListCAP
(in
rosetta.core.scoring._core_scoring_
)
npd_variable_indices_for_state_begin()
(in
DynamicAggregateFunction
)
name()
(in
NcontactsFilter
)
neighbors()
(in
ResidueBurialFilter
)
npd_variable_indices_for_state_end()
(in
DynamicAggregateFunction
)
name()
(in
ParallelBetaPairingPreferenceFilter
)
NeighborsByDistanceCalculator
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
NPDPropCalculator
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
SecondaryStructureCountFilter
)
NeighborsByDistanceCalculatorAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
NPDPropCalculatorAP
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
SecondaryStructureFilter
)
NeighborsByDistanceCalculatorCAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
NPDPropCalculatorCAP
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
SecondaryStructureHasResidueFilter
)
NeighborTypeFilter
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NPDPropCalculatorCreator
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
SheetTopologyFilter
)
NeighborTypeFilterAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NPDPropCalculatorCreatorAP
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
BetaAlphaBetaMotif
)
NeighborTypeFilterCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NPDPropCalculatorCreatorCAP
(in
rosetta.protocols.pack_daemon._protocols_pack_daemon_
)
name()
(in
HelixPairing
)
NeighborTypeFilterCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
npick_per_iter()
(in
Scheduler
)
name()
(in
HelixPairingSet
)
NeighborTypeFilterCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
npos()
(in
SequenceCoupling
)
name()
(in
StrandPairing
)
NeighborTypeFilterCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
nposes()
(in
GatherPosesMover
)
name()
(in
StrandPairingSet
)
NelderMeadSimplex
(in
rosetta.core.optimization._core_optimization_
)
npr()
(in
PackingScore
)
name()
(in
FilterStructs
)
NelderMeadSimplexAP
(in
rosetta.core.optimization._core_optimization_
)
npr()
(in
PackingScoreResData
)
name()
(in
EntityElement
)
NelderMeadSimplexCAP
(in
rosetta.core.optimization._core_optimization_
)
nr_fragments()
(in
LoopClosure
)
name()
(in
FragmentLookupFilter
)
Nend_orient()
(in
SS_Base
)
nr_frags()
(in
Frame
)
name()
(in
FastaInputter
)
Nend_pos()
(in
SS_Base
)
nr_frames()
(in
FragSet
)
name()
(in
Inputter
)
NestedEnergyTermDDGMutationOptEData
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nr_models()
(in
PairingStatistics
)
name()
(in
PDBInputter
)
NestedEnergyTermDDGMutationOptEDataAP
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nr_moves()
(in
MoverContainer
)
name()
(in
SilentFileInputter
)
NestedEnergyTermDDGMutationOptEDataCAP
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nr_open_slaves()
(in
SingleFileBuffer
)
name()
(in
AbstractArchiveBase
)
NestedEnergyTermPNatAAOptEPositionData
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nr_res_affected()
(in
Frame
)
name()
(in
AtomCountFilter
)
NestedEnergyTermPNatAAOptEPositionDataAP
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nr_residues()
(in
Loops
)
name()
(in
ChainExistsFilter
)
NestedEnergyTermPNatAAOptEPositionDataCAP
(in
rosetta.protocols.optimize_weights._protocols_optimize_weights_
)
nrad()
(in
PackingScore
)
name()
(in
CompleteConnectionsFilter
)
NetChargeFilter
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
nrad()
(in
PackingScoreResData
)
name()
(in
HBondAcceptorFilter
)
NetChargeFilterAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NRAMATABLES
(in
rosetta
)
name()
(in
HBondDonorFilter
)
NetChargeFilterCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NRAMATABLES
(in
rosetta.core.scoring
)
name()
(in
HeavyAtomFilter
)
NetChargeFilterCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NRAMATABLES
(in
rosetta.core.scoring._core_scoring_
)
name()
(in
MolarMassFilter
)
NetChargeFilterCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NRAMATABLES
(in
Rama2BOffsetTables
)
name()
(in
MolecularMassFilter
)
NetChargeFilterCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
NRbisafe()
(in
rosetta.core.scoring.fiber_diffraction._core_scoring_fiber_diffraction_
)
name()
(in
RamaCheck1B
)
netTargetPocketVolume()
(in
PocketGrid
)
nrchi_lower_boundary()
(in
DunbrackRotamerSampleData
)
name()
(in
RamaCheck2B
)
Neutral
(in
rosetta.protocols.antibody
)
nrchi_prob_minimum_for_extra_samples()
(in
SampleStrategyData
)
name()
(in
RamaCheckBase
)
Neutral
(in
H3BaseTypeEnum
)
nrchi_probability()
(in
DunbrackRotamerSampleData
)
name()
(in
UpstreamResTypeGeometry
)
Neutral
(in
rosetta.protocols.antibody._protocols_antibody_
)
nrchi_sample()
(in
DunbrackRotamerSampleData
)
name()
(in
ClashCheckFilter
)
neutral_restypes()
(in
IonizableResidue
)
nrchi_upper_boundary()
(in
DunbrackRotamerSampleData
)
name()
(in
GetRBDOFValues
)
NEUTRON_DIFFRACTION
(in
ExperimentalTechnique
)
nres()
(in
FoldTreeSketch
)
name()
(in
InterfacePackingFilter
)
NEUTRON_DIFFRACTION
(in
HeaderInformation
)
nres()
(in
PDBSilentStruct
)
name()
(in
OligomericAverageDegreeFilter
)
new_calculator()
(in
NPDPropCalculatorCreator
)
nres()
(in
RawFileData
)
name()
(in
SymUnsatHbondFilter
)
new_chain()
(in
AddChainMover
)
nres()
(in
RawStruct
)
name()
(in
Mover
)
new_chain_order()
(in
PDB_DReaderOptions
)
nres()
(in
BinarySilentStruct
)
name()
(in
PDBDumpMover
)
new_chemical_bond()
(in
FoldTree
)
nres()
(in
RNA_SilentStruct
)
name()
(in
FormatStringOutputter
)
new_data_instance()
(in
WriteableCacheableDataFactory
)
nres()
(in
RigidBodySilentStruct
)
name()
(in
Outputter
)
new_decoy()
(in
FoldandDockClaimer
)
nres()
(in
ScoreFileSilentStruct
)
name()
(in
PDBOutputter
)
new_decoy()
(in
MembraneTopologyClaimer
)
nres()
(in
ScoreJumpFileSilentStruct
)
name()
(in
ResFileOutputter
)
new_decoy()
(in
TopologyClaimer
)
nres()
(in
SilentFileData
)
name()
(in
SilentFileOutputter
)
new_entity()
(in
EntityElementCreator
)
nres()
(in
SilentStruct
)
name()
(in
VectorExpression
)
new_entity()
(in
GeneticAlgorithm
)
nres()
(in
FoldTree
)
name()
(in
AtomicContactCountFilter
)
new_entity()
(in
GeneticAlgorithmBase
)
nres()
(in
PDBInfo
)
name()
(in
AverageDegreeFilter
)
new_func()
(in
FuncFactory
)
nres()
(in
BackboneGridSampler
)
name()
(in
BindingStrainFilter
)
new_icoor()
(in
Orbital
)
nres()
(in
AllowInsert
)
name()
(in
BoltzmannFilter
)
NEW_JOB_ID_TAG
(in
rosetta.protocols.jd2
)
nres_protein()
(in
rosetta.core.pose._core_pose_
)
name()
(in
ClashWithTargetFilter
)
NEW_JOB_ID_TAG
(in
rosetta.protocols.jd2._protocols_jd2_
)
nres_topo()
(in
SpanningTopology
)
name()
(in
DesignableResiduesFilter
)
NEW_JOB_ID_TAG
(in
mpi_tags
)
nrotamer_offset_for_moltenres()
(in
FixbbRotamerSets
)
name()
(in
DisulfideFilter
)
new_jump()
(in
FoldTree
)
nrotamer_offset_for_moltenres()
(in
RotamerSets
)
name()
(in
FNatFilter
)
new_kinematics()
(in
DoubleLayerKinematicAbinitio
)
nrotamer_offset_for_moltenres()
(in
RotamerSetsBase
)
name()
(in
FilterScanFilter
)
new_kinematics()
(in
KinematicTaskControl
)
nrotamer_offset_for_moltenres()
(in
RotamerSubsets
)
name()
(in
HbondsToAtomFilter
)
new_kinematics()
(in
LoopJumpFoldCst
)
nrotamer_offset_for_moltenres()
(in
FlexbbRotamerSets
)
name()
(in
HbondsToResidueFilter
)
new_move_selector()
(in
StepWiseMonteCarloOptions
)
nrotamers()
(in
FixbbRotamerSets
)
name()
(in
IRmsdFilter
)
new_orbital_icoor_data()
(in
ResidueType
)
nrotamers()
(in
RotamerSets
)
name()
(in
InterfaceHolesFilter
)
new_phi()
(in
BackboneMover
)
nrotamers()
(in
RotamerSetsBase
)
name()
(in
LRmsdFilter
)
new_positions()
(in
Bridge
)
nrotamers()
(in
RotamerSubsets
)
name()
(in
RelativeSegmentFilter
)
new_positions()
(in
BuildInstruction
)
nrotamers()
(in
FlexbbRotamerSets
)
name()
(in
RmsdFilter
)
new_positions()
(in
BuildManager
)
nrotamers_for_moltenres()
(in
FixbbRotamerSets
)
name()
(in
RmsdSimpleFilter
)
new_positions()
(in
ConnectRight
)
nrotamers_for_moltenres()
(in
RotamerSets
)
name()
(in
SSamountFilter
)
new_positions()
(in
GrowLeft
)
nrotamers_for_moltenres()
(in
RotamerSetsBase
)
name()
(in
SequenceRecoveryFilter
)
new_positions()
(in
GrowRight
)
nrotamers_for_moltenres()
(in
RotamerSubsets
)
name()
(in
SpecificResiduesNearInterfaceFilter
)
new_positions()
(in
SegmentRebuild
)
nrotamers_for_moltenres()
(in
FlexbbRotamerSets
)
name()
(in
StubScoreFilter
)
new_positions()
(in
SegmentSwap
)
nrotamers_for_moltenres_in_bbconf()
(in
FlexbbRotamerSets
)
name()
(in
StubScoreLoopsFilter
)
new_psi()
(in
BackboneMover
)
nrotamers_for_res()
(in
FlexbbRotamerSets
)
name()
(in
Torsion
)
new_residue_selector()
(in
ResidueSelectorFactory
)
nrotamers_for_resid_in_bbconf()
(in
FlexbbRotamerSets
)
name()
(in
UniformRigidBodyCM
)
new_secondary_structure_override()
(in
VarLengthBuild
)
nrots()
(in
UniformRotationSampler
)
name()
(in
PosePropertyReporter
)
new_sequence_override()
(in
VarLengthBuild
)
nrows()
(in
LAMBEGO_IO
)
name()
(in
PoseSelector
)
new_sym_min()
(in
SymMinimizerMap
)
nrows()
(in
TorsionBinIO
)
name()
(in
AbinitioBaseFilter
)
new_tasks()
(in
MatDesPointMutationCalculator
)
nsigmoids()
(in
SmoothScoreTermCoeffs
)
name()
(in
AlaScan
)
new_terminal_pos()
(in
CircularPermutation
)
nsol()
(in
CoarseRNA_LoopCloser
)
name()
(in
AngleToVector
)
new_vector1_init()
(in
rosetta
)
nspans()
(in
SpanningTopology
)
name()
(in
AtomicContactFilter
)
newClusteringTreeNode()
(in
ClusteringTreeNode
)
nspans()
(in
Embedding
)
name()
(in
AtomicDistanceFilter
)
newConstraint()
(in
ConstraintFactory
)
nsr_gaussians()
(in
CenHBPotential
)
name()
(in
AveragePathLengthFilter
)
newDataLoader()
(in
DataLoaderFactory
)
nstep()
(in
WaterAnchorInfo
)
name()
(in
BatchEvaluator
)
newFilter()
(in
FilterFactory
)
nstep()
(in
MDBase
)
name()
(in
BatchNrEvaluator
)
newFilter()
(in
DockDesignFilterFactory
)
nstep_per_update()
(in
Thermostat
)
name()
(in
BuriedUnsatHbondFilter
)
newMover()
(in
MoverFactory
)
nsteps()
(in
SimpleDerivCheckResult
)
name()
(in
COFilter
)
newPosePropertyReporter()
(in
PosePropertyReporterFactory
)
nstruct()
(in
ArchiveBase
)
name()
(in
CamShiftEvaluator
)
newPoseSelector()
(in
PoseSelectorFactory
)
nstruct()
(in
Batch
)
name()
(in
ChiWellRmsdEvaluator
)
newResFilter()
(in
ResFilterFactory
)
nstruct()
(in
BasicJob
)
name()
(in
ConservedPosMutationFilter
)
newRLTO()
(in
ResLvlTaskOperationFactory
)
nstruct_centroid()
(in
StepWiseProteinModelerOptions
)
name()
(in
ConstraintScoreCutoffFilter
)
newTaskOperation()
(in
TaskOperationFactory
)
nstruct_index()
(in
Job
)
name()
(in
ContactMapEvaluator
)
newTaskOperations()
(in
TaskOperationFactory
)
nstruct_max()
(in
InnerJob
)
name()
(in
DdGScan
)
next()
(in
AutomorphismIterator
)
nstruct_max()
(in
Job
)
name()
(in
DdgFilter
)
next()
(in
EdgeListElement
)
nstruct_mode()
(in
BackboneGridSampler
)
name()
(in
DeltaFilter
)
next()
(in
Cell
)
nstruct_mode()
(in
BundleGridSampler
)
name()
(in
DisulfideEntropyFilter
)
next()
(in
GridSearchIterator
)
nstruct_repeats()
(in
BackboneGridSampler
)
name()
(in
DomainInterfaceFilter
)
next()
(in
GridSearchIterator_Ts1
)
nstruct_repeats()
(in
BundleGridSampler
)
name()
(in
EnergyPerResidueFilter
)
next()
(in
GridSearchIterator_Ts2
)
nsub_bblock()
(in
ClashCheckFilter
)
name()
(in
ExpiryFilter
)
next()
(in
GridSearchIterator_Ts3
)
NTERM_CONNECT
(in
rosetta
)
name()
(in
ExternalEvaluator
)
next()
(in
GridSearchIterator_Ts4
)
NTERM_CONNECT
(in
rosetta.core.chemical
)
name()
(in
FileExistFilter
)
next()
(in
WorkUnitQueue
)
NTERM_CONNECT
(in
rosetta.core.chemical._core_chemical_
)
name()
(in
FileRemoveFilter
)
next()
(in
WorkUnitQueue_Swapped
)
NTERM_CONNECT
(in
VariantType
)
name()
(in
GeometryFilter
)
next_angle()
(in
BackrubMover
)
nth_dna_base()
(in
DNAParameters
)
name()
(in
HolesFilter
)
next_center()
(in
GridSearchIterator
)
ntor()
(in
NormalMode
)
name()
(in
InterRepeatContactFilter
)
next_center()
(in
GridSearchIterator
)
ntorsions()
(in
CartesianMinimizerMap
)
name()
(in
InterfaceBindingEnergyDensityFilter
)
next_center()
(in
GridSearchIteratorCA
)
ntrials()
(in
CanonicalSamplingMover
)
name()
(in
InterfaceSasaFilter
)
next_center()
(in
GridSearchIterator_Ts1
)
ntrials()
(in
MetropolisHastingsMover
)
name()
(in
IntraRepeatContactFilter
)
next_center()
(in
GridSearchIterator_Ts2
)
ntrials()
(in
SidechainMCMover
)
name()
(in
JScoreEvaluator
)
next_center()
(in
GridSearchIterator_Ts3
)
ntries()
(in
StepWiseProteinCCD_Closer
)
name()
(in
JumpEvaluator
)
next_center()
(in
GridSearchIterator_Ts4
)
NU
(in
rosetta
)
name()
(in
JumpNrEvaluator
)
next_child()
(in
Atom
)
NU
(in
rosetta.core.id
)
name()
(in
LeastNativeLike9merFilter
)
next_child()
(in
Atom_
)
NU
(in
rosetta.core.id._core_id_
)
name()
(in
LoopRmsdEvaluator
)
next_circle()
(in
trace
)
NU
(in
TorsionType
)
name()
(in
MotifScoreFilter
)
next_exchange_schedule()
(in
HamiltonianExchange
)
nu()
(in
Residue
)
name()
(in
MultipleSigmoids
)
next_job()
(in
BaseJobDistributor
)
nu0_components()
(in
DNATorsionPotential
)
name()
(in
MutationsFilter
)
next_level()
(in
HierarchicalLevel
)
NU1
(in
rosetta.core.chemical.rna
)
name()
(in
NMerPSSMEnergyFilter
)
next_random_job()
(in
ShuffleFileSystemJobDistributor
)
NU1
(in
rosetta.core.chemical.rna._core_chemical_rna_
)
name()
(in
NMerSVMEnergyFilter
)
next_resnum()
(in
SidechainMover
)
NU1
(in
RNA_Torsion
)
name()
(in
NeighborTypeFilter
)
next_segment_id()
(in
BackrubMover
)
nu1_components()
(in
DNATorsionPotential
)
name()
(in
NetChargeFilter
)
next_struct()
(in
SilentFilePoseInputStream
)
nu1_north()
(in
RNA_FittedTorsionInfo
)
name()
(in
NonSequentialNeighborsFilter
)
next_torsion_string()
(in
BaseTabooPerturber
)
nu1_south()
(in
RNA_FittedTorsionInfo
)
name()
(in
Operator
)
nfft()
(in
kiss_dct_state
)
NU2
(in
rosetta.core.chemical.rna
)
name()
(in
PDDFScoreFilter
)
nfft()
(in
kiss_fft_state
)
NU2
(in
rosetta.core.chemical.rna._core_chemical_rna_
)
name()
(in
PackStatFilter
)
nfft()
(in
kiss_fftr_state
)
NU2
(in
RNA_Torsion
)
name()
(in
PackerNeighborGraphFilter
)
nfft()
(in
kiss_fftsplit_state
)
nu2_components()
(in
DNATorsionPotential
)
name()
(in
PalesEvaluator
)
nflexible_segments()
(in
FlexbbRotamerSets
)
nu2_north()
(in
RNA_FittedTorsionInfo
)
name()
(in
PoseComment
)
ngaussians()
(in
SmoothScoreTermCoeffs
)
nu2_south()
(in
RNA_FittedTorsionInfo
)
name()
(in
PoseInfoFilter
)
ngroups()
(in
NCSResMapping
)
nu3_components()
(in
DNATorsionPotential
)
name()
(in
PredictedBurialEvaluator
)
nhashlookups()
(in
MotifHashRigidScore
)
nu4_components()
(in
DNATorsionPotential
)
name()
(in
RDC_Evaluator
)
nhbonds()
(in
HBondSet
)
nu_atoms()
(in
ResidueType
)
name()
(in
RGFilter
)
nheavyatoms()
(in
ResidueType
)
nu_atoms()
(in
Residue
)
name()
(in
RangeFilter
)
nheavyatoms()
(in
Residue
)
null_bfs_prune_visitor
(in
rosetta.utility.graph._utility_graph_
)
name()
(in
RelativePoseFilter
)
nirotamers()
(in
IRCollection
)
null_bfs_prune_visitorAP
(in
rosetta.utility.graph._utility_graph_
)
name()
(in
RepeatParameterFilter
)
NIT
(in
rosetta.protocols.match
)
null_bfs_prune_visitorCAP
(in
rosetta.utility.graph._utility_graph_
)
name()
(in
ReportFilter
)
NIT
(in
rosetta.protocols.match._protocols_match_
)
NullMover
(in
rosetta.protocols.moves._protocols_moves_
)
name()
(in
ResidueBurialFilter
)
NIT
(in
ProbeRadius
)
NullMoverAP
(in
rosetta.protocols.moves._protocols_moves_
)
name()
(in
ResidueCountFilter
)
njumps()
(in
RigidBodySilentStruct
)
NullMoverCAP
(in
rosetta.protocols.moves._protocols_moves_
)
name()
(in
ResidueDistanceFilter
)
nlevels()
(in
HierarchicalLevel
)
NullResourceLocator
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
ResidueIEFilter
)
nlevels_per_dim()
(in
FixedTemperatureController
)
NullResourceLocatorAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
ResidueSetChainEnergyFilter
)
nlevels_per_dim()
(in
HamiltonianExchange
)
NullResourceLocatorCAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
ResiduesInInterfaceFilter
)
nlevels_per_dim()
(in
ParallelTempering
)
NullResourceLocatorCreator
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
RmsdEvaluator
)
nlevels_per_dim()
(in
SimulatedTempering
)
NullResourceLocatorCreatorAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
RotamerBoltzmannWeight
)
nlevels_per_dim()
(in
TemperatureController
)
NullResourceLocatorCreatorCAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
SAXSScoreFilter
)
nlevels_per_dim()
(in
TemperingBase
)
NullStream
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
SSMotifFinder
)
nloop()
(in
PackRotamersMover
)
NullStreamAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
SavePoseConstraintToFileFilter
)
nlr_gaussians()
(in
CenHBPotential
)
NullStreamCAP
(in
rosetta.basic.resource_manager.locator._basic_resource_manager_locator_
)
name()
(in
SaveResfileToDiskFilter
)
nls
(in
rosetta.numeric
)
num_aa_types
(in
AA
)
name()
(in
ScoreCutoffFilter
)
NM()
(in
NormalModeRelaxMover
)
num_aa_types
(in
rosetta.core.chemical._core_chemical_
)
name()
(in
ScoreEvaluator
)
nmer_length()
(in
NMerPSSMEnergy
)
num_aa_types
(in
rosetta.core.chemical
)
name()
(in
ScoreTypeFilter
)
nmer_length()
(in
NMerRefEnergy
)
num_aa_types
(in
rosetta
)
name()
(in
SelectGdtEvaluator
)
nmer_length()
(in
NMerSVMEnergy
)
num_aa_types()
(in
FlexbbNode
)
name()
(in
SelectMaxsubEvaluator
)
nmer_pssm
(in
ScoreType
)
num_accepted()
(in
MoverStatistics
)
name()
(in
SelectRDC_Evaluator
)
nmer_pssm
(in
rosetta.core.scoring._core_scoring_
)
num_accepts()
(in
TrialMover
)
name()
(in
SelectRmsdEvaluator
)
nmer_pssm
(in
rosetta.core.scoring
)
num_atoms()
(in
rosetta.core.pose._core_pose_
)
name()
(in
ShapeComplementarityFilter
)
nmer_pssm
(in
rosetta
)
num_atoms()
(in
ClosureProblem
)
name()
(in
SheetFilter
)
nmer_pssm_scorecut()
(in
NMerPSSMEnergy
)
num_base_rotamers_total()
(in
ContinuousRotamerSet
)
name()
(in
SidechainRmsdFilter
)
nmer_ref
(in
ScoreType
)
num_bb_clones()
(in
SymmetryInfo
)
name()
(in
Sigmoid
)
nmer_ref
(in
rosetta.core.scoring._core_scoring_
)
num_bbconfs()
(in
FlexbbNode
)
name()
(in
StemFinder
)
nmer_ref
(in
rosetta.core.scoring
)
num_bins()
(in
XformScore
)
name()
(in
StructuralSimilarityEvaluator
)
nmer_ref
(in
rosetta
)
num_bins()
(in
MultiDimensionalHistogram
)
name()
(in
SymmetricMotifFilter
)
nmer_svm
(in
ScoreType
)
num_bins()
(in
DOFHistogramRecorder
)
name()
(in
SymmetricRmsdEvaluator
)
nmer_svm
(in
rosetta.core.scoring._core_scoring_
)
num_bondangles()
(in
ResidueType
)
name()
(in
TaskAwareSASAFilter
)
nmer_svm
(in
rosetta.core.scoring
)
num_bondangles()
(in
MMBondAngleResidueTypeParam
)
name()
(in
TaskAwareScoreTypeFilter
)
nmer_svm
(in
rosetta
)
num_cacheable_data_types
(in
Enum
)
name()
(in
TerminusDistanceFilter
)
nmer_svm_scorecut()
(in
NMerSVMEnergy
)
num_cacheable_data_types
(in
CacheableDataType
)
name()
(in
TotalSasaFilter
)
NMerPSSMEnergy
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_cacheable_data_types
(in
Enum
)
name()
(in
TruncatedScoreEvaluator
)
NMerPSSMEnergyAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_cacheable_data_types
(in
CacheableObserverType
)
name()
(in
O2M_MutateMover
)
NMerPSSMEnergyCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_canonical_aas
(in
AA
)
name()
(in
ChemicalShiftEvaluator
)
NMerPSSMEnergyCreator
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_canonical_aas
(in
rosetta.core.chemical._core_chemical_
)
name()
(in
AlignRMSD_Screener
)
NMerPSSMEnergyCreatorAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_canonical_aas
(in
rosetta.core.chemical
)
name()
(in
AnchorSugarScreener
)
NMerPSSMEnergyCreatorCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_canonical_aas
(in
rosetta
)
name()
(in
BaseBinMapUpdater
)
NMerPSSMEnergyFilter
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cdr_loops
(in
CDRNameEnum
)
name()
(in
BaseCentroidScreener
)
NMerPSSMEnergyFilterAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cdr_loops
(in
rosetta.protocols.antibody._protocols_antibody_
)
name()
(in
BulgeApplier
)
NMerPSSMEnergyFilterCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cdr_loops
(in
rosetta.protocols.antibody
)
name()
(in
CentroidDistanceScreener
)
NMerPSSMEnergyFilterCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_chains()
(in
Conformation
)
name()
(in
FastForwardToNextResidueAlternative
)
NMerPSSMEnergyFilterCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_chains()
(in
VallData
)
name()
(in
FastForwardToNextRigidBody
)
NMerPSSMEnergyFilterCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_chi_angles()
(in
rosetta.core.pose._core_pose_
)
name()
(in
IntegrationTestBreaker
)
NMerRefEnergy
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_chi_clones()
(in
SymmetryInfo
)
name()
(in
O2PrimeScreener
)
NMerRefEnergyAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_chi_samples_total()
(in
FullChiSampleSet
)
name()
(in
PackScreener
)
NMerRefEnergyCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_chunk_sets()
(in
RNA_ChunkLibrary
)
name()
(in
PartitionContactScreener
)
NMerRefEnergyCreator
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_chunks()
(in
ChunkSet
)
name()
(in
PhosphateScreener
)
NMerRefEnergyCreatorAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_chunks()
(in
RNA_ChunkLibrary
)
name()
(in
PoseSelectionScreener
)
NMerRefEnergyCreatorCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_coef1()
(in
BranchAngleOptimizer
)
name()
(in
ProteinCCD_ClosureScreener
)
NMerSVMEnergy
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_coef2()
(in
BranchAngleOptimizer
)
name()
(in
RNA_ChainClosableGeometryResidueBasedScreener
)
NMerSVMEnergyAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_components()
(in
DecomposeAndReweightEnergiesCalculator
)
name()
(in
RNA_ChainClosableGeometryScreener
)
NMerSVMEnergyCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_contact_types
(in
ContactType
)
name()
(in
RNA_ChainClosableGeometryStubBasedScreener
)
NMerSVMEnergyCreator
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_contact_types
(in
rosetta.protocols.frag_picker._protocols_frag_picker_
)
name()
(in
RNA_ChainClosureScreener
)
NMerSVMEnergyCreatorAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_contact_types
(in
rosetta.protocols.frag_picker
)
name()
(in
ResidueContactScreener
)
NMerSVMEnergyCreatorCAP
(in
rosetta.core.scoring.methods._core_scoring_methods_
)
num_context_graph_types
(in
ContextGraphType
)
name()
(in
SampleApplier
)
NMerSVMEnergyFilter
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_context_graph_types
(in
rosetta.core.scoring._core_scoring_
)
name()
(in
Scorer
)
NMerSVMEnergyFilterAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_context_graph_types
(in
rosetta.core.scoring
)
name()
(in
StepWiseResiduePairScreener
)
NMerSVMEnergyFilterCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_context_graph_types
(in
rosetta
)
name()
(in
StepWiseScreener
)
NMerSVMEnergyFilterCreator
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cstType
(in
cstType
)
name()
(in
StubApplier
)
NMerSVMEnergyFilterCreatorAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cstType
(in
rosetta.protocols.jumping._protocols_jumping_
)
name()
(in
StubDistanceScreener
)
NMerSVMEnergyFilterCreatorCAP
(in
rosetta.protocols.simple_filters._protocols_simple_filters_
)
num_cstType
(in
rosetta.protocols.jumping
)
name()
(in
SugarInstantiator
)
nmissing()
(in
LoopGraph
)
num_cutpoint()
(in
FoldTree
)
name()
(in
TagDefinition
)
nmode()
(in
NormalMode
)
num_cuts()
(in
FoldTreeSketch
)
name()
(in
VDW_BinScreener
)
nmodes()
(in
NormalModeMultifunc
)
num_deriv()
(in
DOF_DataPoint
)
name()
(in
WorkUnit_ElScripts
)
nmolten_res()
(in
FlexbbRotamerSets
)
num_deriv()
(in
DerivCheckDataPoint
)
name()
(in
FileName
)
nmoltenres()
(in
ContinuousRotamerSets
)
num_designable()
(in
GenericMonteCarloMover
)
name()
(in
PathName
)
nmoltenres()
(in
FixbbRotamerSets
)
num_dimensions()
(in
MultiDimensionalHistogram
)
name1()
(in
ResidueType
)
nmoltenres()
(in
RotamerSets
)
num_dofType
(in
dofType
)
name1()
(in
Residue
)
nmoltenres()
(in
RotamerSetsBase
)
num_dofType
(in
rosetta.protocols.jumping._protocols_jumping_
)
name2suite()
(in
RNA_SuiteName
)
nmoltenres()
(in
RotamerSubsets
)
num_dofType
(in
rosetta.protocols.jumping
)
name3()
(in
ResidueType
)
nmoltenres()
(in
FlexbbRotamerSets
)
num_domains()
(in
MultipleDomainMover
)
name3()
(in
Residue
)
nmotifs()
(in
MotifLibrary
)
num_edges()
(in
UpperEdgeGraph_T_core_conformation_PointGraphVertexData_core_conformation_PointGraphEdgeData_T
)
name3()
(in
RotamerDots
)
nmoves()
(in
BackboneMover
)
num_edges()
(in
Graph
)
name3()
(in
IonizableResidue
)
NMR
(in
ExperimentalTechnique
)
num_edges()
(in
Node
)
name3_from_oneletter()
(in
rosetta.protocols.motifs._protocols_motifs_
)
NMR
(in
HeaderInformation
)
num_elements()
(in
recent_history_queue
)
name3_map()
(in
ResidueTypeSet
)
NO_ADDUCTS
(in
rosetta.core.pack.task._core_pack_task_
)
num_entities()
(in
EntityCorrespondence
)
name_from_aa()
(in
rosetta.core.chemical._core_chemical_
)
NO_ADDUCTSAP
(in
rosetta.core.pack.task._core_pack_task_
)
num_enz_cst_template_res()
(in
MatchConstraintFileInfo
)
name_from_acc_chem_type()
(in
HBondTypeManager
)
NO_ADDUCTSCAP
(in
rosetta.core.pack.task._core_pack_task_
)
num_features_proq2()
(in
ProQPotential
)
name_from_database_mode()
(in
rosetta.utility.sql_database._utility_sql_database_
)
NO_ATTACHMENT
(in
rosetta.protocols.stepwise.monte_carlo.mover
)
num_features_proqm()
(in
ProQPotential
)
name_from_deriv_type()
(in
HBondTypeManager
)
NO_ATTACHMENT
(in
AttachmentType
)
num_fragpick()
(in
BluePrintBDR
)
name_from_don_chem_type()
(in
HBondTypeManager
)
NO_ATTACHMENT
(in
rosetta.protocols.stepwise.monte_carlo.mover._protocols_stepwise_monte_carlo_mover_
)
num_fragpick()
(in
VarLengthBuild
)
name_from_foldtype()
(in
SheetFoldTypeManager
)
NO_CHI
(in
rosetta.core.chemical.rna
)
num_geom_cst()
(in
PDBWriter
)
name_from_geo_dim_type()
(in
HBondTypeManager
)
NO_CHI
(in
ChiState
)
num_hbond_acceptors()
(in
rosetta.core.pose._core_pose_
)
name_from_hybridization_type()
(in
HBondTypeManager
)
NO_CHI
(in
rosetta.core.chemical.rna._core_chemical_rna_
)
num_hbond_donors()
(in
rosetta.core.pose._core_pose_
)
name_from_score_type()
(in
ScoreTypeManager
)
NO_DERIVATIVES_FOR_ATOM
(in
rosetta.core.scoring.disulfides
)
num_heavy_atoms()
(in
rosetta.core.pose._core_pose_
)
name_from_score_type()
(in
rosetta.core.scoring._core_scoring_
)
NO_DERIVATIVES_FOR_ATOM
(in
DisulfideDerivativeAtom
)
num_hits()
(in
MotifHits
)
name_from_seq_sep_type()
(in
HBondTypeManager
)
NO_DERIVATIVES_FOR_ATOM
(in
rosetta.core.scoring.disulfides._core_scoring_disulfides_
)
num_hits1()
(in
MotifHits
)
name_from_transaction_mode()
(in
rosetta.utility.sql_database._utility_sql_database_
)
NO_DESIGN
(in
LayerOperationType
)
num_hits2()
(in
MotifHits
)
name_from_weight_type()
(in
HBondTypeManager
)
NO_DESIGN
(in
LayerDesignOperation
)
num_independent_residues()
(in
SymmetryInfo
)
name_map()
(in
ResidueTypeSet
)
no_design()
(in
FlxbbDesign
)
num_interactions()
(in
ResInteractions
)
name_of_hbond_calc()
(in
BuriedUnsatisfiedPolarsCalculator
)
no_dis_dep_die()
(in
Coulomb
)
num_interfaces()
(in
SymmetryInfo
)
name_of_hbond_calc()
(in
SemiExplicitWaterUnsatisfiedPolarsCalculator
)
no_effect
(in
rosetta.protocols.generalized_kinematic_closure.perturber._protocols_generalized_kinematic_closure_perturber_
)
num_iterations()
(in
ddGMover
)
name_of_sasa_calc()
(in
BuriedUnsatisfiedPolarsCalculator
)
no_effect
(in
perturber_effect
)
num_iterations()
(in
LoopHashDiversifier
)
name_to_listener_tag()
(in
rosetta.basic.message_listening._basic_message_listening_
)
no_effect
(in
rosetta.protocols.generalized_kinematic_closure.perturber
)
num_jump()
(in
FoldTree
)
name_wo_rgstr()
(in
StrandPairingSet
)
NO_EXTRA_CHI_SAMPLES
(in
rosetta
)
num_jump()
(in
Pose
)
named_atom_id_to_atom_id()
(in
rosetta.core.conformation._core_conformation_
)
NO_EXTRA_CHI_SAMPLES
(in
rosetta.core.pack.task
)
num_jump()
(in
InterfaceInfo
)
named_atom_id_to_atom_id()
(in
rosetta.core.pose._core_pose_
)
NO_EXTRA_CHI_SAMPLES
(in
ExtraRotSample
)
num_jump_clones()
(in
SymmetryInfo
)
named_stub_id_to_stub_id()
(in
rosetta.core.pose._core_pose_
)
NO_EXTRA_CHI_SAMPLES
(in
rosetta.core.pack.task._core_pack_task_
)
num_jumps()
(in
FoldTreeSketch
)
NamedAngleConstraint
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_filter
(in
filter_type
)
num_loop()
(in
Loops
)
NamedAngleConstraintAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_filter
(in
rosetta.protocols.generalized_kinematic_closure.filter._protocols_generalized_kinematic_closure_filter_
)
num_loops()
(in
LoopGraph
)
NamedAngleConstraintCAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_filter
(in
rosetta.protocols.generalized_kinematic_closure.filter
)
num_loops()
(in
AnchorMoversData
)
NamedAngleConstraintCreator
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_min
(in
MinTypeEnum
)
num_loops()
(in
EnzdesLoopsFile
)
NamedAngleConstraintCreatorAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_min
(in
rosetta.protocols.antibody.design._protocols_antibody_design_
)
num_mcfi_lists()
(in
EnzConstraintIO
)
NamedAngleConstraintCreatorCAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
no_min
(in
rosetta.protocols.antibody.design
)
num_mcfis()
(in
MatchConstraintFileInfoList
)
NamedAtomID
(in
rosetta.core.id._core_id_
)
NO_MOVE
(in
rosetta.protocols.stepwise.monte_carlo.mover
)
num_motifs()
(in
MotifHash
)
NamedAtomID_Map_NamedAtomID
(in
rosetta.core.id._core_id_
)
NO_MOVE
(in
MoveType
)
num_moving_chunks()
(in
RNA_ChunkLibrary
)
NamedAtomID_Map_NamedAtomIDAP
(in
rosetta.core.id._core_id_
)
NO_MOVE
(in
rosetta.protocols.stepwise.monte_carlo.mover._protocols_stepwise_monte_carlo_mover_
)
num_neighbors_counting_self()
(in
Node
)
NamedAtomID_Map_NamedAtomIDCAP
(in
rosetta.core.id._core_id_
)
NO_OP
(in
rosetta.protocols.stepwise.sampler
)
num_neighbors_counting_self_static()
(in
Node
)
NamedAtomID_Map_T_core_id_NamedAtomID_T
(in
rosetta.core.id._core_id_
)
NO_OP
(in
rosetta.protocols.stepwise.sampler._protocols_stepwise_sampler_
)
num_nodes()
(in
Graph
)
NamedAtomID_Map_T_core_id_NamedAtomID_TAP
(in
rosetta.core.id._core_id_
)
NO_OP
(in
StepWiseSamplerType
)
num_npd_properties()
(in
DynamicAggregateFunction
)
NamedAtomID_Map_T_core_id_NamedAtomID_TCAP
(in
rosetta.core.id._core_id_
)
no_optH()
(in
ImportPoseOptions
)
num_npd_properties_for_state()
(in
DynamicAggregateFunction
)
NamedAtomIDAP
(in
rosetta.core.id._core_id_
)
NO_OVERLAP
(in
rosetta.core.scoring.motif
)
num_orbital_types
(in
rosetta.core.chemical.orbitals._core_chemical_orbitals_
)
NamedAtomIDCAP
(in
rosetta.core.id._core_id_
)
NO_OVERLAP
(in
MotifMatchOverlapReq
)
num_orbital_types
(in
orbital_type_enum
)
NamedAtomPairConstraint
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
NO_OVERLAP
(in
rosetta.core.scoring.motif._core_scoring_motif_
)
num_orbital_types
(in
rosetta.core.chemical.orbitals
)
NamedAtomPairConstraintAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
NO_PUCKER
(in
rosetta.core.chemical.rna
)
num_origins()
(in
FingerprintBase
)
NamedAtomPairConstraintCAP
(in
rosetta.core.scoring.constraints._core_scoring_constraints_
)
NO_PUCKER
(in
rosetta.core.chemical.rna._core_chemical_rna_
)
num_pairings()
(in
Dssp
)
NamedAtomPairConstraintCreator
(in
rosetta.protocols.constraints_additional._protocols_constraints_additional_
)
NO_PUCKER
(in
PuckerState
)
num_pose_minimize()
(in
StepWiseProteinMinimizer
)
NamedAtomPairConstraintCreatorAP
(in
rosetta.protocols.constraints_additional._protocols_constraints_additional_
)
NO_REACTIVITY
(in
rosetta.core.scoring.rna.data
)
num_pose_minimize()
(in
StepWiseBasicOptions
)
NamedAtomPairConstraintCreatorCAP
(in
rosetta.protocols.constraints_additional._protocols_constraints_additional_
)
NO_REACTIVITY
(in
rosetta.core.scoring.rna.data._core_scoring_rna_data_
)
num_positions()
(in
OptEData
)
NamedStubID
(in
rosetta.core.id._core_id_
)
NO_REACTIVITY
(in
RNA_ReactivityType
)
num_possible_bins()
(in
XformScore
)
NamedStubIDAP
(in
rosetta.core.id._core_id_
)
no_relax()
(in
FlxbbDesign
)
num_pts()
(in
APCluster
)
NamedStubIDCAP
(in
rosetta.core.id._core_id_
)
NO_ROTAMER_TYPE
(in
rosetta.protocols.stepwise.sampler
)
num_random_samples()
(in
StepWiseSampleAndScreen
)
names
(in
ProfTag
)
NO_ROTAMER_TYPE
(in
rosetta.protocols.stepwise.sampler._protocols_stepwise_sampler_
)
num_random_samples()
(in
StepWiseProteinCCD_MultiPoseCloser
)
names
(in
TracerPriority
)
NO_ROTAMER_TYPE
(in
StepWiseSamplerType
)
num_random_samples()
(in
StepWiseBasicOptions
)
names
(in
listener_tags
)
no_samples
(in
ChiStrategy
)
num_residues()
(in
FullatomDisulfideEnergyContainer
)
names
(in
AA
)
no_samples
(in
rosetta.protocols.match.upstream._protocols_match_upstream_
)
num_residues()
(in
ClosureProblem
)
names
(in
BondAromaticity
)
no_samples
(in
rosetta.protocols.match.upstream
)
num_residues()
(in
EntityCorrespondence
)
names
(in
BondConjugability
)
no_selector
(in
rosetta.protocols.generalized_kinematic_closure.selector._protocols_generalized_kinematic_closure_selector_
)
num_rings()
(in
RNA_CS_residue_parameters
)
names
(in
BondIsometry
)
no_selector
(in
selector_type
)
NUM_RM_TYPES
(in
rosetta.core.scoring.motif
)
names
(in
BondName
)
no_selector
(in
rosetta.protocols.generalized_kinematic_closure.selector
)
NUM_RM_TYPES
(in
rosetta.core.scoring.motif._core_scoring_motif_
)
names
(in
BondOrder
)
no_stats
(in
rosetta
)
NUM_RM_TYPES
(in
RM_Type
)
names
(in
BondRingness
)
no_stats
(in
StatsType
)
num_rotamers()
(in
RotamerSetBase
)
names
(in
CPParameter
)
no_stats
(in
rosetta.protocols.moves._protocols_moves_
)
num_rotamers()
(in
RotamerSet
)
names
(in
AngularMomentumQuantumNumber
)
no_stats
(in
rosetta.protocols.moves
)
num_rotamers()
(in
RotamerSet_
)
names
(in
PrincipalQuantumNumber
)
NO_STRANDS
(in
rosetta.protocols.fldsgn.topology
)
num_rotamers()
(in
RotamerSubset
)
names
(in
Properties
)
NO_STRANDS
(in
rosetta.protocols.fldsgn.topology._protocols_fldsgn_topology_
)
num_rotamers()
(in
SymmetricRotamerSet_
)
names
(in
Hybridization
)
NO_STRANDS
(in
SheetFoldType
)
num_rotamers()
(in
FlexbbRotamerSet
)
names
(in
Type
)
NO_SYMMETRIZATION_REQUEST
(in
rosetta
)
num_rotamers()
(in
OptEData
)
names
(in
ResidueProperty
)
NO_SYMMETRIZATION_REQUEST
(in
rosetta.core.pack.task
)
NUM_RPM_TYPES
(in
rosetta.core.scoring.motif
)
names
(in
VariantType
)
NO_SYMMETRIZATION_REQUEST
(in
rosetta.core.pack.task._core_pack_task_
)
NUM_RPM_TYPES
(in
rosetta.core.scoring.motif._core_scoring_motif_
)
names
(in
AtomicOrbitalTypes
)
NO_SYMMETRIZATION_REQUEST
(in
PackerTaskSymmetryStatus
)
NUM_RPM_TYPES
(in
RPM_Type
)
names
(in
HybridOrbitalType
)
NO_TYPE
(in
rosetta.core.pose.full_model_info
)
num_samples()
(in
QuaternionGrid
)
names
(in
PiContributionType
)
NO_TYPE
(in
FullModelParameterType
)
num_sampling_rotamers_total()
(in
ContinuousRotamerSet
)
names
(in
Properties
)
NO_TYPE
(in
rosetta.core.pose.full_model_info._core_pose_full_model_info_
)
num_screeners()
(in
StepWiseSampleAndScreen
)
names
(in
TypeDifference
)
nobjs()
(in
MultiObjective
)
num_segments()
(in
BackrubMover
)
names
(in
orbital_type_enum
)
NoBondIsometry
(in
rosetta
)
num_selectors()
(in
AndResidueSelector
)
names
(in
BaseEdge
)
NoBondIsometry
(in
rosetta.core.chemical
)
num_selectors()
(in
OrResidueSelector
)
names
(in
ChiState
)
NoBondIsometry
(in
BondIsometry
)
num_seqpos_lists()
(in
AllowedSeqposForGeomCst
)
names
(in
PuckerState
)
NoBondIsometry
(in
rosetta.core.chemical._core_chemical_
)
num_sets()
(in
VirtualSugarJustInTimeInstantiator
)
names
(in
RNA_Torsion
)
Node
(in
rosetta.core.graph._core_graph_
)
num_sets()
(in
DecomposeAndReweightEnergiesCalculator
)
names
(in
Strategy
)
Node
(in
rosetta.protocols.toolbox._protocols_toolbox_
)
num_sheets()
(in
SheetSet
)
names
(in
ppo_torsion_bin
)
node()
(in
DisjointSets
)
num_slidablejumps()
(in
SymmetryInfo
)
names
(in
MEM
)
NodeAP
(in
rosetta.core.graph._core_graph_
)
num_states()
(in
DynamicAggregateFunction
)
names
(in
Tag
)
NodeAP
(in
rosetta.protocols.toolbox._protocols_toolbox_
)
num_states_for_aa_for_bb()
(in
FlexbbNode
)
names
(in
Tag
)
NodeBase
(in
rosetta.core.pack.interaction_graph._core_pack_interaction_graph_
)
num_states_for_bb()
(in
FlexbbNode
)
names
(in
Tag
)
NodeBaseAP
(in
rosetta.core.pack.interaction_graph._core_pack_interaction_graph_
)
num_states_per_backbone_for_moltenres()
(in
FlexbbRotamerSets
)
names
(in
SlideCriteriaType
)
NodeBaseCAP
(in
rosetta.core.pack.interaction_graph._core_pack_interaction_graph_
)
num_states_total()
(in
LexicographicalIterator
)
names
(in
SlideType
)
NodeCAP
(in
rosetta.core.graph._core_graph_
)
num_steps()
(in
GeomSampleInfo
)
names
(in
dof_type
)
NodeCAP
(in
rosetta.protocols.toolbox._protocols_toolbox_
)
num_strands()
(in
Sheet
)
names
(in
DOF_Type
)
nodes()
(in
ResidueNetwork
)
num_strands()
(in
StrandPairingSet
)
names
(in
TorsionType
)
nodes_from_same_flexseg()
(in
FlexbbInteractionGraph
)
num_strings()
(in
BaseTabooPerturber
)
names
(in
CompoundToken
)
nodes_in_set()
(in
DisjointSets
)
num_successes()
(in
StepWiseSampleAndScreen
)
names
(in
ExperimentalTechnique
)
noesy_assign
(in
rosetta.protocols
)
num_target_states()
(in
InvrotTree
)
names
(in
SharedSilentDataType
)
NOESY_ASSIGN_CALIBRATE
(in
rosetta.basic
)
num_to_be_packed()
(in
PackerTask
)
names
(in
ResiduePairEvalType
)
NOESY_ASSIGN_CALIBRATE
(in
rosetta.basic._basic_
)
num_to_be_packed()
(in
PackerTask_
)
names
(in
BumpSelectorDecision
)
NOESY_ASSIGN_CALIBRATE
(in
ProfTag
)
num_total_residues()
(in
SymmetryInfo
)
names
(in
ExtraRotSample
)
NOESY_ASSIGN_CHEMSHIFT
(in
rosetta.basic
)
num_total_residues_with_pseudo()
(in
SymmetryInfo
)
names
(in
PackerTaskSymmetryStatus
)
NOESY_ASSIGN_CHEMSHIFT
(in
rosetta.basic._basic_
)
num_total_residues_without_pseudo()
(in
SymmetryInfo
)
names
(in
PoseCoordPickMode
)
NOESY_ASSIGN_CHEMSHIFT
(in
ProfTag
)
num_trials()
(in
RationalMonteCarlo
)
names
(in
Enum
)
NOESY_ASSIGN_CP_GEN_CST
(in
rosetta.basic
)
num_tries()
(in
StepWiseSampleAndScreen
)
names
(in
Enum
)
NOESY_ASSIGN_CP_GEN_CST
(in
rosetta.basic._basic_
)
num_triggers()
(in
GenericMonteCarloMover
)
names
(in
FullModelParameterType
)
NOESY_ASSIGN_CP_GEN_CST
(in
ProfTag
)
num_try_div()
(in
LoopHashDiversifier
)
names
(in
ContextGraphType
)
NOESY_ASSIGN_DECOY_COMP
(in
rosetta.basic
)
num_undefined_coef1()
(in
BranchAngleOptimizer
)
names
(in
DC_TYPE
)
NOESY_ASSIGN_DECOY_COMP
(in
rosetta.basic._basic_
)
num_undefined_coef2()
(in
BranchAngleOptimizer
)
names
(in
ProteinTorsion
)
NOESY_ASSIGN_DECOY_COMP
(in
ProfTag
)
num_vertices()
(in
UpperEdgeGraph_T_core_conformation_PointGraphVertexData_core_conformation_PointGraphEdgeData_T
)
names
(in
RDC_TYPE
)
NOESY_ASSIGN_DIAGONAL
(in
rosetta.basic
)
num_virtuals()
(in
SymmetryInfo
)
names
(in
Rama2BOffsetTables
)
NOESY_ASSIGN_DIAGONAL
(in
rosetta.basic._basic_
)
num_water()
(in
SimplePDB
)
names
(in
ScoreType
)
NOESY_ASSIGN_DIAGONAL
(in
ProfTag
)
Number()
(in
Permute
)
names
(in
min_pair_data
)
NOESY_ASSIGN_DIST_APPLY
(in
rosetta.basic
)
Number()
(in
QuatSet
)
names
(in
min_single_data
)
NOESY_ASSIGN_DIST_APPLY
(in
rosetta.basic._basic_
)
number()
(in
PDBInfo
)
names
(in
BTSB_SUBBIN_TYPE
)
NOESY_ASSIGN_DIST_APPLY
(in
ProfTag
)
number_bonded_heavyatoms()
(in
ResidueType
)
names
(in
BT_PROPERTIES
)
NOESY_ASSIGN_DIST_CST_CAST
(in
rosetta.basic
)
number_bonded_hydrogens()
(in
ResidueType
)
names
(in
LinkageType
)
NOESY_ASSIGN_DIST_CST_CAST
(in
rosetta.basic._basic_
)
number_of_basepairs()
(in
DNAParameters
)
names
(in
DisulfideDerivativeAtom
)
NOESY_ASSIGN_DIST_CST_CAST
(in
ProfTag
)
number_of_bases()
(in
DNAParameters
)
names
(in
CPCrossoverBehavior
)
NOESY_ASSIGN_DIST_CST_EVAL
(in
rosetta.basic
)
number_of_basesteps()
(in
DNAParameters
)
names
(in
CPResidueConnectionType
)
NOESY_ASSIGN_DIST_CST_EVAL
(in
rosetta.basic._basic_
)
number_of_configuration_keywords
(in
rosetta
)
names
(in
OccFitParam
)
NOESY_ASSIGN_DIST_CST_EVAL
(in
ProfTag
)
number_of_configuration_keywords
(in
LoopConfiguration
)
names
(in
HBAccChemType
)
NOESY_ASSIGN_DIST_INIT
(in
rosetta.basic
)
number_of_configuration_keywords
(in
rosetta.protocols.loops._protocols_loops_
)
names
(in
HBDerivType
)
NOESY_ASSIGN_DIST_INIT
(in
rosetta.basic._basic_
)
number_of_configuration_keywords
(in
rosetta.protocols.loops
)
names
(in
HBDonChemType
)
NOESY_ASSIGN_DIST_INIT
(in
ProfTag
)
number_of_loop_refine_inner_cycle_names
(in
LoopRefineInnerCycleName
)
names
(in
HBEvalType
)
NOESY_ASSIGN_DIST_MAKE_POSE
(in
rosetta.basic
)
number_of_loop_refine_inner_cycle_names
(in
rosetta.protocols.loops.loop_mover.refine._protocols_loops_loop_mover_refine_
)
names
(in
HBGeoDimType
)
NOESY_ASSIGN_DIST_MAKE_POSE
(in
rosetta.basic._basic_
)
number_of_loop_refine_inner_cycle_names
(in
rosetta.protocols.loops.loop_mover.refine
)
names
(in
HBSeqSep
)
NOESY_ASSIGN_DIST_MAKE_POSE
(in
ProfTag
)
number_of_moves()
(in
SmallMinCCDTrial
)
names
(in
HBondWeightType
)
NOESY_ASSIGN_DIST_PREP_SCORE
(in
rosetta.basic
)
number_of_patchdock_entries()
(in
PatchdockReader
)
names
(in
EnergyMethodType
)
NOESY_ASSIGN_DIST_PREP_SCORE
(in
rosetta.basic._basic_
)
number_of_ramachandran_hashes
(in
RamachandranHash
)
names
(in
EnergyMethods
)
NOESY_ASSIGN_DIST_PREP_SCORE
(in
ProfTag
)
number_of_ramachandran_hashes
(in
rosetta.protocols.features._protocols_features_
)
names
(in
LongRangeEnergyType
)
NOESY_ASSIGN_DIST_SET_COMPABILITY_SCORE
(in
rosetta.basic
)
number_of_ramachandran_hashes
(in
rosetta.protocols.features
)
names
(in
MotifMatchOverlapReq
)
NOESY_ASSIGN_DIST_SET_COMPABILITY_SCORE
(in
rosetta.basic._basic_
)
number_of_residue_identifiers
(in
rosetta
)
names
(in
RM_Type
)
NOESY_ASSIGN_DIST_SET_COMPABILITY_SCORE
(in
ProfTag
)
number_of_residue_identifiers
(in
ResidueIdentifier
)
names
(in
RPM_Type
)
NOESY_ASSIGN_DISTANCE
(in
rosetta.basic
)
number_of_residue_identifiers
(in
rosetta.protocols.loops._protocols_loops_
)
names
(in
h_type
)
NOESY_ASSIGN_DISTANCE
(in
rosetta.basic._basic_
)
number_of_residue_identifiers
(in
rosetta.protocols.loops
)
names
(in
orbital_type_name
)
NOESY_ASSIGN_DISTANCE
(in
ProfTag
)
number_to_propagate()
(in
GeneticAlgorithmBase
)
names
(in
EventType
)
NOESY_ASSIGN_ELIMINATE
(in
rosetta.basic
)
NumberBondingPOrbitals
(in
GasteigerAtomTypeData
)
names
(in
atomitem
)
NOESY_ASSIGN_ELIMINATE
(in
rosetta.basic._basic_
)
NumberBondingPOrbitals
(in
TypeDifference
)
names
(in
RNA_ReactivityType
)
NOESY_ASSIGN_ELIMINATE
(in
ProfTag
)
NumberBondingSOrbitals
(in
GasteigerAtomTypeData
)
names
(in
SasaMethodEnum
)
NOESY_ASSIGN_GEN_CST
(in
rosetta.basic
)
NumberBondingSOrbitals
(in
TypeDifference
)
names
(in
SasaRadii
)
NOESY_ASSIGN_GEN_CST
(in
rosetta.basic._basic_
)
NumberHBondsCalculator
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
names
(in
__ATTEN_ENUM__
)
NOESY_ASSIGN_GEN_CST
(in
ProfTag
)
NumberHBondsCalculatorAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
names
(in
AlignMove
)
NOESY_ASSIGN_INITIAL
(in
rosetta.basic
)
NumberHBondsCalculatorCAP
(in
rosetta.protocols.toolbox.pose_metric_calculators._protocols_toolbox_pose_metric_calculators_
)
names
(in
RocStatus
)
NOESY_ASSIGN_INITIAL
(in
rosetta.basic._basic_
)
NumberHybridOrbitalType
(in
HybridOrbitalType
)
names
(in
TokenType
)
NOESY_ASSIGN_INITIAL
(in
ProfTag
)
NumberHybridOrbitalType
(in
GasteigerAtomTypeData
)
names
(in
BorderFlag
)
NOESY_ASSIGN_MAP2CB
(in
rosetta.basic
)
numbering_scheme()
(in
PDBLandmark
)
names
(in
StageID
)
NOESY_ASSIGN_MAP2CB
(in
rosetta.basic._basic_
)
numbering_scheme_enum_to_string()
(in
AntibodyEnumManager
)
names
(in
IterationStage
)
NOESY_ASSIGN_MAP2CB
(in
ProfTag
)
numbering_scheme_is_present()
(in
AntibodyEnumManager
)
names
(in
StageID
)
NOESY_ASSIGN_MAP2CB_NEW
(in
rosetta.basic
)
numbering_scheme_string_to_enum()
(in
AntibodyEnumManager
)
names
(in
StageID
)
NOESY_ASSIGN_MAP2CB_NEW
(in
rosetta.basic._basic_
)
NumberLonePairOrbitals
(in
GasteigerAtomTypeData
)
names
(in
StageID
)
NOESY_ASSIGN_MAP2CB_NEW
(in
ProfTag
)
NumberLonePairOrbitals
(in
TypeDifference
)
names
(in
InterfaceRegion
)
NOESY_ASSIGN_NETWORK
(in
rosetta.basic
)
NumberOfAtomicOrbitalTypes
(in
AtomicOrbitalTypes
)
names
(in
PeptideDeriverEntryType
)
NOESY_ASSIGN_NETWORK
(in
rosetta.basic._basic_
)
NumberOfAtomicOrbitalTypes
(in
GasteigerAtomTypeData
)
names
(in
PeptideDeriverReportFormat
)
NOESY_ASSIGN_NETWORK
(in
ProfTag
)
numberOfAtoms()
(in
SmallMol
)
names
(in
AntibodyNumberingSchemeEnum
)
NOESY_ASSIGN_NETWORK_COMPUTE_NK
(in
rosetta.basic
)
NumberOfProperties
(in
Element
)
names
(in
AntibodyRegionEnum
)
NOESY_ASSIGN_NETWORK_COMPUTE_NK
(in
rosetta.basic._basic_
)
NumberOfProperties
(in
Properties
)
names
(in
CDRDefinitionEnum
)
NOESY_ASSIGN_NETWORK_COMPUTE_NK
(in
ProfTag
)
NumberOfProperties
(in
GasteigerAtomTypeData
)
names
(in
CDRLandmarkEnum
)
NOESY_ASSIGN_NETWORK_FILL_COV_GAMMA
(in
rosetta.basic
)
NumberOfProperties
(in
Properties
)
names
(in
CDRNameEnum
)
NOESY_ASSIGN_NETWORK_FILL_COV_GAMMA
(in
rosetta.basic._basic_
)
NumberTypeDifferences
(in
GasteigerAtomTypeData
)
names
(in
H3BaseTypeEnum
)
NOESY_ASSIGN_NETWORK_FILL_COV_GAMMA
(in
ProfTag
)
NumberTypeDifferences
(in
TypeDifference
)
names
(in
LightChainTypeEnum
)
NOESY_ASSIGN_NETWORK_FIND_RAW_ASSIGN
(in
rosetta.basic
)
numchanges()
(in
rosetta.numeric.kinematic_closure._numeric_kinematic_closure_
)
names
(in
PackingAngleEnum
)
NOESY_ASSIGN_NETWORK_FIND_RAW_ASSIGN
(in
rosetta.basic._basic_
)
NumDerivCheckData
(in
rosetta.core.optimization._core_optimization_
)
names
(in
CDRClusterEnum
)
NOESY_ASSIGN_NETWORK_FIND_RAW_ASSIGN
(in
ProfTag
)
NumDerivCheckDataAP
(in
rosetta.core.optimization._core_optimization_
)
names
(in
AntibodyDesignProtocolEnum
)
NOESY_ASSIGN_NETWORK_INVALIDATE_SEQ_NOE
(in
rosetta.basic
)
NumDerivCheckDataCAP
(in
rosetta.core.optimization._core_optimization_
)
names
(in
MinTypeEnum
)
NOESY_ASSIGN_NETWORK_INVALIDATE_SEQ_NOE
(in
rosetta.basic._basic_
)
numeric
(in
rosetta
)
names
(in
SeqDesignStrategyEnum
)
NOESY_ASSIGN_NETWORK_INVALIDATE_SEQ_NOE
(in
ProfTag
)
numeric_properties()
(in
ResidueProperties
)
names
(in
InterpolationType
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT
(in
rosetta.basic
)
numerical_derivative_check()
(in
rosetta.core.optimization._core_optimization_
)
names
(in
SSType
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT
(in
rosetta.basic._basic_
)
numerical_derivative_check()
(in
rosetta.core.optimization.symmetry._core_optimization_symmetry_
)
names
(in
TorsionBin
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT
(in
ProfTag
)
NumericalDerivCheckResult
(in
rosetta.core.optimization._core_optimization_
)
names
(in
StubMode
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT_EVAL
(in
rosetta.basic
)
NumericalDerivCheckResultAP
(in
rosetta.core.optimization._core_optimization_
)
names
(in
PrioSubtype
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT_EVAL
(in
rosetta.basic._basic_
)
NumericalDerivCheckResultCAP
(in
rosetta.core.optimization._core_optimization_
)
names
(in
ControlStrength
)
NOESY_ASSIGN_NETWORK_PEAK_COUNT_EVAL
(in
ProfTag
)
NumericTraits_T_double_T
(in
rosetta.numeric._numeric_
)
names
(in
CstAction
)
NOESY_ASSIGN_NETWORK_RETRIEVE_ASSIGN
(in
rosetta.basic
)
NumericTraits_T_double_TAP
(in
rosetta.numeric._numeric_
)
names
(in
_RNA_MatchType_
)
NOESY_ASSIGN_NETWORK_RETRIEVE_ASSIGN
(in
rosetta.basic._basic_
)
NumericTraits_T_double_TCAP
(in
rosetta.numeric._numeric_
)
names
(in
HBDefType
)
NOESY_ASSIGN_NETWORK_RETRIEVE_ASSIGN
(in
ProfTag
)
NumericTraits_T_float_T
(in
rosetta.numeric._numeric_
)
names
(in
RamachandranHash
)
NOESY_ASSIGN_NETWORK_TOTAL
(in
rosetta.basic
)
NumericTraits_T_float_TAP
(in
rosetta.numeric._numeric_
)
names
(in
boolean_operations
)
NOESY_ASSIGN_NETWORK_TOTAL
(in
rosetta.basic._basic_
)
NumericTraits_T_float_TCAP
(in
rosetta.numeric._numeric_
)
names
(in
SheetFoldType
)
NOESY_ASSIGN_NETWORK_TOTAL
(in
ProfTag
)
NumericTraits_T_long_double_T
(in
rosetta.numeric._numeric_
)
names
(in
Subsitution
)
NOESY_ASSIGN_NMR_STRING
(in
rosetta.basic
)
NumericTraits_T_long_double_TAP
(in
rosetta.numeric._numeric_
)
names
(in
LayerOperationType
)
NOESY_ASSIGN_NMR_STRING
(in
rosetta.basic._basic_
)
NumericTraits_T_long_double_TCAP
(in
rosetta.numeric._numeric_
)
names
(in
LayerSpecificationType
)
NOESY_ASSIGN_NMR_STRING
(in
ProfTag
)
numGaussians()
(in
USOGFunc
)
names
(in
Enum
)
NOESY_ASSIGN_PA_GEN_CST
(in
rosetta.basic
)
NumNeighborsMPM
(in
rosetta.protocols.match._protocols_match_
)
names
(in
ContactType
)
NOESY_ASSIGN_PA_GEN_CST
(in
rosetta.basic._basic_
)
NumNeighborsMPMAP
(in
rosetta.protocols.match._protocols_match_
)
names
(in
filter_type
)
NOESY_ASSIGN_PA_GEN_CST
(in
ProfTag
)
NumNeighborsMPMCAP
(in
rosetta.protocols.match._protocols_match_
)
names
(in
perturber_effect
)
NOESY_ASSIGN_READ_INPUT
(in
rosetta.basic
)
NumNeighborsSelector
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
selector_type
)
NOESY_ASSIGN_READ_INPUT
(in
rosetta.basic._basic_
)
NumNeighborsSelectorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
DoFType
)
NOESY_ASSIGN_READ_INPUT
(in
ProfTag
)
NumNeighborsSelectorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
PertType
)
NOESY_ASSIGN_REQUIRES_CB_MAPPING
(in
rosetta.basic
)
NumNeighborsSelectorCreator
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
StubStatus
)
NOESY_ASSIGN_REQUIRES_CB_MAPPING
(in
rosetta.basic._basic_
)
NumNeighborsSelectorCreatorAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
ExecutionMode
)
NOESY_ASSIGN_REQUIRES_CB_MAPPING
(in
ProfTag
)
NumNeighborsSelectorCreatorCAP
(in
rosetta.core.pack.task.residue_selector._core_pack_task_residue_selector_
)
names
(in
StructureOutputMode
)
NOESY_ASSIGN_SYMMETRY
(in
rosetta.basic
)
numroots()
(in
rosetta.numeric.kinematic_closure._numeric_kinematic_closure_
)
names
(in
AlignOption
)
NOESY_ASSIGN_SYMMETRY
(in
rosetta.basic._basic_
)
nus()
(in
Residue
)
names
(in
LookupMode
)
NOESY_ASSIGN_SYMMETRY
(in
ProfTag
)
nusing()
(in
GoapRsdType
)
names
(in
mpi_tags
)
NOESY_ASSIGN_TOTAL
(in
rosetta.basic
)
nv
(in
rosetta.core.scoring
)
names
(in
cstType
)
NOESY_ASSIGN_TOTAL
(in
rosetta.basic._basic_
)
nvar()
(in
NormalModeMultifunc
)
names
(in
dofType
)
NOESY_ASSIGN_TOTAL
(in
ProfTag
)
NVlookup
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
KRSQueryType
)
NOESY_ASSIGN_UPDATE_PEAK_VOL
(in
rosetta.basic
)
NVlookupAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
Distribution
)
NOESY_ASSIGN_UPDATE_PEAK_VOL
(in
rosetta.basic._basic_
)
NVlookupCAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
Type
)
NOESY_ASSIGN_UPDATE_PEAK_VOL
(in
ProfTag
)
NVscore
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
FunctionSign
)
NOESY_ASSIGN_WRITE_ASSIGNMENTS
(in
rosetta.basic
)
NVscoreAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
FoldTreeRequest
)
NOESY_ASSIGN_WRITE_ASSIGNMENTS
(in
rosetta.basic._basic_
)
NVscoreCAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
LoopConfiguration
)
NOESY_ASSIGN_WRITE_ASSIGNMENTS
(in
ProfTag
)
NVscoreCreator
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
ResidueIdentifier
)
NOESY_ASSIGN_WRITE_CST
(in
rosetta.basic
)
NVscoreCreatorAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
ChainDirection
)
NOESY_ASSIGN_WRITE_CST
(in
rosetta.basic._basic_
)
NVscoreCreatorCAP
(in
rosetta.core.scoring.nv._core_scoring_nv_
)
names
(in
SecondaryStructureType
)
NOESY_ASSIGN_WRITE_CST
(in
ProfTag
)
NWAligner
(in
rosetta.core.sequence._core_sequence_
)
names
(in
LoopResult
)
NOESY_PHASEII_S2_RESAMPLING
(in
IterationStage
)
NWAlignerAP
(in
rosetta.core.sequence._core_sequence_
)
names
(in
LoopRefineInnerCycleName
)
NOESY_PHASEII_S2_RESAMPLING
(in
IterativeBase
)
NWAlignerCAP
(in
rosetta.core.sequence._core_sequence_
)
names
(in
MakeRotLibPolymerType
)
NOESY_PHASEII_TOPO
(in
IterationStage
)
NWDP_TM()
(in
TMalign
)
names
(in
ProbeRadius
)
NOESY_PHASEII_TOPO
(in
IterativeBase
)
names
(in
ChiStrategy
)
non_const_pose()
(in
OnTheFlyInteractionGraph
)
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