SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_core_chemical_ChemicalManager_TAP

SingletonBase_T_core_chemical_ChemicalManager_TCAP

StepWiseResiduePairScreener
protocols/stepwise/screener/StepWiseResiduePairScreener.hh:26

StepWiseResiduePairScreenerAP

StepWiseResiduePairScreenerCAP

StepWiseScreener
protocols/stepwise/screener/StepWiseScreener.hh:38

StepWiseScreenerAP

StepWiseScreenerCAP

StepWiseScreenerType
protocols/stepwise/screener/StepWiseScreenerType.hh:23

StubApplier
protocols/stepwise/screener/StubApplier.hh:29

StubApplierAP

StubApplierCAP

StubDistanceScreener
protocols/stepwise/screener/StubDistanceScreener.hh:27

StubDistanceScreenerAP

StubDistanceScreenerCAP

SugarInstantiator
protocols/stepwise/screener/SugarInstantiator.hh:26

SugarInstantiatorAP

SugarInstantiatorCAP

TagDefinition
protocols/stepwise/screener/TagDefinition.hh:30

TagDefinitionAP

TagDefinitionCAP

VDW_BinScreener
protocols/stepwise/screener/VDW_BinScreener.hh:32

VDW_BinScreenerAP

VDW_BinScreenerCAP

__CPP_AlignRMSD_Screener__

__CPP_AnchorSugarScreener__

__CPP_BaseBinMapUpdater__

__CPP_BaseCentroidScreener__

__CPP_BulgeApplier__

__CPP_CentroidDistanceScreener__

__CPP_FastForwardToNextResidueAlternative__

__CPP_FastForwardToNextRigidBody__

__CPP_IntegrationTestBreaker__

__CPP_O2PrimeScreener__

__CPP_PackScreener__

__CPP_PartitionContactScreener__

__CPP_PhosphateScreener__

__CPP_PoseSelectionScreener__

__CPP_ProteinCCD_ClosureScreener__

__CPP_RNA_ChainClosableGeometryResidueBasedScreener__

__CPP_RNA_ChainClosableGeometryScreener__

__CPP_RNA_ChainClosableGeometryStubBasedScreener__

__CPP_RNA_ChainClosureScreener__

__CPP_ResidueContactScreener__

__CPP_SampleApplier__

__CPP_Scorer__

__CPP_StepWiseResiduePairScreener__

__CPP_StepWiseScreener__

__CPP_StubApplier__

__CPP_StubDistanceScreener__

__CPP_SugarInstantiator__

__CPP_TagDefinition__

__CPP_VDW_BinScreener__

Functions

[hide private]

fast_forward_to_next_residue_pair(...)
fast_forward_to_next_residue_pair( (object)sampler, (int)res1, (int)res2) -> None : protocols/stepwise/screener/util.hh:31

Variables

[hide private]

ALIGN_RMSD = rosetta.protocols.stepwise.screener._protocols_st...

ANCHOR_SUGAR = rosetta.protocols.stepwise.screener._protocols_...

ATR_REP = rosetta.protocols.stepwise.screener._protocols_stepw...

BASE_BIN_MAP = rosetta.protocols.stepwise.screener._protocols_...

BASE_CENTROID = rosetta.protocols.stepwise.screener._protocols...

BULGE_APPLIER = rosetta.protocols.stepwise.screener._protocols...

CENTROID_DISTANCE = rosetta.protocols.stepwise.screener._proto...

FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE = rosetta.protocols.s...

FAST_FORWARD_TO_NEXT_RIGID_BODY = rosetta.protocols.stepwise.s...

INTEGRATION_TEST = rosetta.protocols.stepwise.screener._protoc...

NONE = rosetta.protocols.stepwise.screener._protocols_stepwise...

O2PRIME_PACK = rosetta.protocols.stepwise.screener._protocols_...

PACK = rosetta.protocols.stepwise.screener._protocols_stepwise...

PARTITION_CONTACT = rosetta.protocols.stepwise.screener._proto...

PHOSPHATE_PACK = rosetta.protocols.stepwise.screener._protocol...

POSE_SELECTION = rosetta.protocols.stepwise.screener._protocol...

PROTEIN_ATR_REP = rosetta.protocols.stepwise.screener._protoco...

PROTEIN_CCD_CLOSURE = rosetta.protocols.stepwise.screener._pro...

RESIDUE_APPLIER = rosetta.protocols.stepwise.screener._protoco...

RESIDUE_CONTACT = rosetta.protocols.stepwise.screener._protoco...

RNA_CHAIN_CLOSABLE_GEOMETRY = rosetta.protocols.stepwise.scree...

RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED = rosetta.protocols....

RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED = rosetta.protocols.ste...

RNA_CHAIN_CLOSURE = rosetta.protocols.stepwise.screener._proto...

SAMPLE_APPLIER = rosetta.protocols.stepwise.screener._protocol...

SAMPLE_APPLIER_WITH_RESIDUE_LIST = rosetta.protocols.stepwise....

SCORER = rosetta.protocols.stepwise.screener._protocols_stepwi...

SIMPLE_POSE_SELECTION = rosetta.protocols.stepwise.screener._p...

SIMPLE_RMSD = rosetta.protocols.stepwise.screener._protocols_s...

STUB_APPLIER = rosetta.protocols.stepwise.screener._protocols_...

STUB_DISTANCE = rosetta.protocols.stepwise.screener._protocols...

SUGAR_INSTANTIATOR = rosetta.protocols.stepwise.screener._prot...

TAG_DEFINITION = rosetta.protocols.stepwise.screener._protocol...

VDW_ATR_REP = rosetta.protocols.stepwise.screener._protocols_s...

VDW_BIN = rosetta.protocols.stepwise.screener._protocols_stepw...

__package__ = None

Function Details

[hide private]

fast_forward_to_next_residue_pair(...)


fast_forward_to_next_residue_pair( (object)sampler, (int)res1, (int)res2) -> None :
    protocols/stepwise/screener/util.hh:31

    C++ signature :
        void fast_forward_to_next_residue_pair(boost::shared_ptr<protocols::stepwise::sampler::StepWiseSamplerBase>,unsigned long,unsigned long)

Variables Details

[hide private]

ALIGN_RMSD

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.ALIGN_RMSD

ANCHOR_SUGAR

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.ANCHOR_SUGAR

ATR_REP

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.ATR_REP

BASE_BIN_MAP

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.BASE_BIN_MAP

BASE_CENTROID

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.BASE_CENTROID

BULGE_APPLIER

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.BULGE_APPLIER

CENTROID_DISTANCE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.CENTROID_DISTANCE

FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE

FAST_FORWARD_TO_NEXT_RIGID_BODY

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.FAST_FORWARD_TO_NEXT_RIGID_BODY

INTEGRATION_TEST

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.INTEGRATION_TEST

NONE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.NONE

O2PRIME_PACK

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.O2PRIME_PACK

PACK

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.PACK

PARTITION_CONTACT

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.PARTITION_CONTACT

PHOSPHATE_PACK

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.PHOSPHATE_PACK

POSE_SELECTION

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.POSE_SELECTION

PROTEIN_ATR_REP

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.PROTEIN_ATR_REP

PROTEIN_CCD_CLOSURE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.PROTEIN_CCD_CLOSURE

RESIDUE_APPLIER

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RESIDUE_APPLIER

RESIDUE_CONTACT

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RESIDUE_CONTACT

RNA_CHAIN_CLOSABLE_GEOMETRY

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY

RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED

RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED

RNA_CHAIN_CLOSURE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.RNA_CHAIN_CLOSURE

SAMPLE_APPLIER

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SAMPLE_APPLIER

SAMPLE_APPLIER_WITH_RESIDUE_LIST

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SAMPLE_APPLIER_WITH_RESIDUE_LIST

SCORER

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SCORER

SIMPLE_POSE_SELECTION

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SIMPLE_POSE_SELECTION

SIMPLE_RMSD

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SIMPLE_RMSD

STUB_APPLIER

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.STUB_APPLIER

STUB_DISTANCE

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.STUB_DISTANCE

SUGAR_INSTANTIATOR

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.SUGAR_INSTANTIATOR

TAG_DEFINITION

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.TAG_DEFINITION

VDW_ATR_REP

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.VDW_ATR_REP

VDW_BIN

Value:

rosetta.protocols.stepwise.screener._protocols_stepwise_screener_.Step
WiseScreenerType.VDW_BIN