Home | Trees | Indices | Help |
---|
|
|
|||
AtomID ////////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////////// Atom identifier class. |
|||
AtomIDAP | |||
AtomIDCAP | |||
AtomID_Map_AtomID core/id/AtomID_Map.hh:507 |
|||
AtomID_Map_AtomIDAP | |||
AtomID_Map_AtomIDCAP | |||
AtomID_Map_Real core/id/AtomID_Map.hh:506 |
|||
AtomID_Map_RealAP | |||
AtomID_Map_RealCAP | |||
AtomID_Map_T_bool_T Map from Atom identifiers to contained values class |
|||
AtomID_Map_T_bool_TAP | |||
AtomID_Map_T_bool_TCAP | |||
AtomID_Map_T_core_id_AtomID_T Map from Atom identifiers to contained values class |
|||
AtomID_Map_T_core_id_AtomID_TAP | |||
AtomID_Map_T_core_id_AtomID_TCAP | |||
AtomID_Map_T_double_T Map from Atom identifiers to contained values class |
|||
AtomID_Map_T_double_TAP | |||
AtomID_Map_T_double_TCAP | |||
AtomID_Map_T_numeric_xyzVector_T_double_T__T Map from Atom identifiers to contained values class |
|||
AtomID_Map_T_numeric_xyzVector_T_double_T__TAP | |||
AtomID_Map_T_numeric_xyzVector_T_double_T__TCAP | |||
AtomID_Map_bool core/id/AtomID_Map.hh:505 |
|||
AtomID_Map_boolAP | |||
AtomID_Map_boolCAP | |||
BondID ////////////////////////////////////////////////////////////////////////////... |
|||
BondIDAP | |||
BondIDCAP | |||
CacheableAtomID_MapVector AtomID_Map< xyzVector< Real > > |
|||
CacheableAtomID_MapVectorAP | |||
CacheableAtomID_MapVectorCAP | |||
DOF_ID Kinematics DOF identifier class |
|||
DOF_IDAP | |||
DOF_IDCAP | |||
DOF_ID_Range Kinematics DOF identifier (with range) class |
|||
DOF_ID_RangeAP | |||
DOF_ID_RangeCAP | |||
DOF_Type DOF (degrees of freedom) type |
|||
EXCN_AtomNotFound core/id/Exceptions.hh:31 |
|||
EXCN_AtomNotFoundAP | |||
EXCN_AtomNotFoundCAP | |||
JumpID /brief Torsion identifier class... |
|||
JumpIDAP | |||
JumpIDCAP | |||
NamedAtomID //////////////////////////////////////////////////////////////////////////... |
|||
NamedAtomIDAP | |||
NamedAtomIDCAP | |||
NamedAtomID_Map_NamedAtomID core/id/NamedAtomID_Map.hh:475 |
|||
NamedAtomID_Map_NamedAtomIDAP | |||
NamedAtomID_Map_NamedAtomIDCAP | |||
NamedAtomID_Map_T_core_id_NamedAtomID_T Map from Atom identifiers to contained values class |
|||
NamedAtomID_Map_T_core_id_NamedAtomID_TAP | |||
NamedAtomID_Map_T_core_id_NamedAtomID_TCAP | |||
NamedStubID ////////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////////////// |
|||
NamedStubIDAP | |||
NamedStubIDCAP | |||
SequenceMapping core/id/SequenceMapping.hh:37 |
|||
SequenceMappingAP | |||
SequenceMappingCAP | |||
StubID //////////////////////////////////////////////////////////////////////////// |
|||
StubIDAP | |||
StubIDCAP | |||
TorsionID Torsion identifier class Consider a few examples to get a better picture for how torsions are uniquely identified: @code #include <core/id/types.hh> using core::id::BB; TorsionID(253, BB, 1) // Phi backbone torsion of residue 253. |
|||
TorsionIDAP | |||
TorsionIDCAP | |||
TorsionID_Range Kinematics DOF identifier (with range) class |
|||
TorsionID_RangeAP | |||
TorsionID_RangeCAP | |||
TorsionType Torsion type -- used in the TorsionID class |
|||
__CPP_CacheableAtomID_MapVector__ |
|
|||
|
|||
|
|||
|
|||
|
|||
|
|
DOF_type_is_rb( (DOF_Type)t) -> bool : ////////////////////////////////////////////////////////////////////////// C++ signature : bool DOF_type_is_rb(core::id::DOF_Type) |
combine_sequence_mappings( (SequenceMapping)smap, (SequenceMapping)smap_to_add) -> None : combine the input sequence mappings into one utility function added by flo, feb 2011 C++ signature : void combine_sequence_mappings(core::id::SequenceMapping {lvalue},core::id::SequenceMapping) combine_sequence_mappings( (object)smaps) -> SequenceMapping : make one sequence mapping out of all input ones utility function added by flo, feb 2011 C++ signature : boost::shared_ptr<core::id::SequenceMapping> combine_sequence_mappings(utility::vector1<core::id::SequenceMapping, std::allocator<core::id::SequenceMapping> >) |
get_rb_number( (DOF_Type)t) -> int : ////////////////////////////////////////////////////////////////////////// C++ signature : unsigned long get_rb_number(core::id::DOF_Type) |
get_rb_type( (int)k) -> DOF_Type : ////////////////////////////////////////////////////////////////////////// C++ signature : core::id::DOF_Type get_rb_type(unsigned long) |
to_string( (TorsionType)type) -> str : core/id/types.hh:87 C++ signature : std::string to_string(core::id::TorsionType) to_string( (DOF_Type)type) -> str : core/id/types.hh:49 C++ signature : std::string to_string(core::id::DOF_Type) |
Home | Trees | Indices | Help |
---|
Generated by Epydoc 3.0.1 on Sat Jun 6 00:10:48 2015 | http://epydoc.sourceforge.net |