| Home | Trees | Indices | Help |
|---|
|
|
|
|||
|
AtomID ////////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////////// Atom identifier class. |
|||
| AtomIDAP | |||
| AtomIDCAP | |||
|
AtomID_Map_AtomID core/id/AtomID_Map.hh:507 |
|||
| AtomID_Map_AtomIDAP | |||
| AtomID_Map_AtomIDCAP | |||
|
AtomID_Map_Real core/id/AtomID_Map.hh:506 |
|||
| AtomID_Map_RealAP | |||
| AtomID_Map_RealCAP | |||
|
AtomID_Map_T_bool_T Map from Atom identifiers to contained values class |
|||
| AtomID_Map_T_bool_TAP | |||
| AtomID_Map_T_bool_TCAP | |||
|
AtomID_Map_T_core_id_AtomID_T Map from Atom identifiers to contained values class |
|||
| AtomID_Map_T_core_id_AtomID_TAP | |||
| AtomID_Map_T_core_id_AtomID_TCAP | |||
|
AtomID_Map_T_double_T Map from Atom identifiers to contained values class |
|||
| AtomID_Map_T_double_TAP | |||
| AtomID_Map_T_double_TCAP | |||
|
AtomID_Map_T_numeric_xyzVector_T_double_T__T Map from Atom identifiers to contained values class |
|||
| AtomID_Map_T_numeric_xyzVector_T_double_T__TAP | |||
| AtomID_Map_T_numeric_xyzVector_T_double_T__TCAP | |||
|
AtomID_Map_bool core/id/AtomID_Map.hh:505 |
|||
| AtomID_Map_boolAP | |||
| AtomID_Map_boolCAP | |||
|
BondID ////////////////////////////////////////////////////////////////////////////... |
|||
| BondIDAP | |||
| BondIDCAP | |||
|
CacheableAtomID_MapVector AtomID_Map< xyzVector< Real > > |
|||
| CacheableAtomID_MapVectorAP | |||
| CacheableAtomID_MapVectorCAP | |||
|
DOF_ID Kinematics DOF identifier class |
|||
| DOF_IDAP | |||
| DOF_IDCAP | |||
|
DOF_ID_Range Kinematics DOF identifier (with range) class |
|||
| DOF_ID_RangeAP | |||
| DOF_ID_RangeCAP | |||
|
DOF_Type DOF (degrees of freedom) type |
|||
|
EXCN_AtomNotFound core/id/Exceptions.hh:31 |
|||
| EXCN_AtomNotFoundAP | |||
| EXCN_AtomNotFoundCAP | |||
|
JumpID /brief Torsion identifier class... |
|||
| JumpIDAP | |||
| JumpIDCAP | |||
|
NamedAtomID //////////////////////////////////////////////////////////////////////////... |
|||
| NamedAtomIDAP | |||
| NamedAtomIDCAP | |||
|
NamedAtomID_Map_NamedAtomID core/id/NamedAtomID_Map.hh:475 |
|||
| NamedAtomID_Map_NamedAtomIDAP | |||
| NamedAtomID_Map_NamedAtomIDCAP | |||
|
NamedAtomID_Map_T_core_id_NamedAtomID_T Map from Atom identifiers to contained values class |
|||
| NamedAtomID_Map_T_core_id_NamedAtomID_TAP | |||
| NamedAtomID_Map_T_core_id_NamedAtomID_TCAP | |||
|
NamedStubID ////////////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////////////////////// |
|||
| NamedStubIDAP | |||
| NamedStubIDCAP | |||
|
SequenceMapping core/id/SequenceMapping.hh:37 |
|||
| SequenceMappingAP | |||
| SequenceMappingCAP | |||
|
StubID //////////////////////////////////////////////////////////////////////////// |
|||
| StubIDAP | |||
| StubIDCAP | |||
|
TorsionID Torsion identifier class Consider a few examples to get a better picture for how torsions are uniquely identified: @code #include <core/id/types.hh> using core::id::BB; TorsionID(253, BB, 1) // Phi backbone torsion of residue 253. |
|||
| TorsionIDAP | |||
| TorsionIDCAP | |||
|
TorsionID_Range Kinematics DOF identifier (with range) class |
|||
| TorsionID_RangeAP | |||
| TorsionID_RangeCAP | |||
|
TorsionType Torsion type -- used in the TorsionID class |
|||
| __CPP_CacheableAtomID_MapVector__ | |||
|
|||
|
|||
|
|||
|
|||
|
|||
|
|||
|
|||
DOF_type_is_rb( (DOF_Type)t) -> bool :
//////////////////////////////////////////////////////////////////////////
C++ signature :
bool DOF_type_is_rb(core::id::DOF_Type)
|
combine_sequence_mappings( (SequenceMapping)smap, (SequenceMapping)smap_to_add) -> None :
combine the input sequence mappings into one
utility function added by flo, feb 2011
C++ signature :
void combine_sequence_mappings(core::id::SequenceMapping {lvalue},core::id::SequenceMapping)
combine_sequence_mappings( (object)smaps) -> SequenceMapping :
make one sequence mapping out of all input ones
utility function added by flo, feb 2011
C++ signature :
boost::shared_ptr<core::id::SequenceMapping> combine_sequence_mappings(utility::vector1<core::id::SequenceMapping, std::allocator<core::id::SequenceMapping> >)
|
get_rb_number( (DOF_Type)t) -> int :
//////////////////////////////////////////////////////////////////////////
C++ signature :
unsigned long get_rb_number(core::id::DOF_Type)
|
get_rb_type( (int)k) -> DOF_Type :
//////////////////////////////////////////////////////////////////////////
C++ signature :
core::id::DOF_Type get_rb_type(unsigned long)
|
to_string( (TorsionType)type) -> str :
core/id/types.hh:87
C++ signature :
std::string to_string(core::id::TorsionType)
to_string( (DOF_Type)type) -> str :
core/id/types.hh:49
C++ signature :
std::string to_string(core::id::DOF_Type)
|
| Home | Trees | Indices | Help |
|---|
| Generated by Epydoc 3.0.1 on Sat Jun 6 00:10:48 2015 | http://epydoc.sourceforge.net |