rosetta.protocols.jd2.archive._protocols_jd2_archive

Module _protocols_jd2_archive_

Classes

AbstractArchiveBase
Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input This job distributor is meant for running jobs where the machine you are using has a large number of processors, the number of jobs is much greater than the number of processors, or the runtimes of the individual jobs could vary greatly.

AbstractArchiveBaseAP

AbstractArchiveBaseCAP

ArchiveBase
protocols/jd2/archive/ArchiveBase.hh:127

ArchiveBaseAP

ArchiveBaseCAP

ArchiveManager
ArchiveManager is responsible for communication with JobDistributor and organization of Batches and returning decoys @detail he owns an Archive (AbstractArchiveBase) that will be handed the decoys and is asked to generate_batch() if the QUEUE_EMPTY .

ArchiveManagerAP

ArchiveManagerCAP

BaseArchiveManager
ArchiveManager is responsible for communication with JobDistributor and organization of Batches and returning decoys @detail he owns an Archive (AbstractArchiveBase) that will be handed the decoys and is asked to generate_batch() if the QUEUE_EMPTY .

BaseArchiveManagerAP

BaseArchiveManagerCAP

Batch
a Batch represents a directory "batch_000xxx" that contains flags, broker-setup input-files and output-files @detail the Batch-class helps to get the correct file- and directory names, and has some knowledge about its status: finished, unfinished ...

BatchAP

BatchCAP

EXCN_Archive
protocols/jd2/archive/ArchiveManager.hh:46

EXCN_ArchiveAP

EXCN_ArchiveCAP

EvaluatedArchive
Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input This job distributor is meant for running jobs where the machine you are using has a large number of processors, the number of jobs is much greater than the number of processors, or the runtimes of the individual jobs could vary greatly.

EvaluatedArchiveAP

EvaluatedArchiveCAP

MPIArchiveJobDistributor
Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input JobDistributor for the iterative ArchiveManager/Archive Framework This job distributor is meant for running iterative jobs with the ArchiveManager/Archive Framework.

MPIArchiveJobDistributorAP

MPIArchiveJobDistributorCAP

NormalizedEvaluatedArchive
Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input This job distributor is meant for running jobs where the machine you are using has a large number of processors, the number of jobs is much greater than the number of processors, or the runtimes of the individual jobs could vary greatly.

NormalizedEvaluatedArchiveAP

NormalizedEvaluatedArchiveCAP

VarianceStatisticsArchive
protocols/jd2/archive/VarianceStatisticsArchive.hh:43

VarianceStatisticsArchiveAP

VarianceStatisticsArchiveCAP

__CPP_AbstractArchiveBase__

__CPP_ArchiveBase__

__CPP_EvaluatedArchive__

__CPP_NormalizedEvaluatedArchive__

__CPP_VarianceStatisticsArchive__

Functions

[hide private]

report_batch_inconsistency(...)
report_batch_inconsistency( (Batch)new_batch, (str)tag) -> None : protocols/jd2/archive/ArchiveManager.hh:51

Variables

[hide private]

__package__ = None

Function Details

[hide private]

report_batch_inconsistency(...)


report_batch_inconsistency( (Batch)new_batch, (str)tag) -> None :
    protocols/jd2/archive/ArchiveManager.hh:51

    C++ signature :
        void report_batch_inconsistency(protocols::jd2::archive::Batch {lvalue},std::string)