Package rosetta :: Package protocols :: Package optimize_weights

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Package optimize_weights

source code

Submodules

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rosetta.protocols.optimize_weights._protocols_optimize_weights_

Variables

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ADDED_STRUCTURE_AS_INTENDED = rosetta.protocols.optimize_weigh...

ADDED_STRUCTURE_OPPOSITE_AS_INTENDED = rosetta.protocols.optim...

DID_NOT_ADD_STRUCTURE = rosetta.protocols.optimize_weights._pr...

END_OF_MINIMIZATION = rosetta.protocols.optimize_weights._prot...

EVAL_DFUNC = rosetta.protocols.optimize_weights._protocols_opt...

EVAL_FUNC = rosetta.protocols.optimize_weights._protocols_opti...

__package__ = 'rosetta.protocols.optimize_weights'

constrained_optimization_weight_func = rosetta.protocols.optim...

dG_binding_correlation = rosetta.protocols.optimize_weights._p...

ddG_bind_correlation = rosetta.protocols.optimize_weights._pro...

ddG_mutation_correlation = rosetta.protocols.optimize_weights....

ddG_mutation_correlation_with_unfolded_energy = rosetta.protoc...

n_optE_data_types = rosetta.protocols.optimize_weights._protoc...

prob_native_amino_acid = rosetta.protocols.optimize_weights._p...

prob_native_amino_acid_with_unfolded_energy = rosetta.protocol...

prob_native_ligand_pose = rosetta.protocols.optimize_weights._...

prob_native_rotamer = rosetta.protocols.optimize_weights._prot...

prob_native_structure = rosetta.protocols.optimize_weights._pr...

pssm_data = rosetta.protocols.optimize_weights._protocols_opti...

Variables Details

[hide private]

ADDED_STRUCTURE_AS_INTENDED

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.AddSta
tus.ADDED_STRUCTURE_AS_INTENDED

ADDED_STRUCTURE_OPPOSITE_AS_INTENDED

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.AddSta
tus.ADDED_STRUCTURE_OPPOSITE_AS_INTENDED

DID_NOT_ADD_STRUCTURE

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.AddSta
tus.DID_NOT_ADD_STRUCTURE

END_OF_MINIMIZATION

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEMu
ltifuncMPIMessages.END_OF_MINIMIZATION

EVAL_DFUNC

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEMu
ltifuncMPIMessages.EVAL_DFUNC

EVAL_FUNC

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEMu
ltifuncMPIMessages.EVAL_FUNC

constrained_optimization_weight_func

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.constrained_optimization_weight_func

dG_binding_correlation

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.dG_binding_correlation

ddG_bind_correlation

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.ddG_bind_correlation

ddG_mutation_correlation

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.ddG_mutation_correlation

ddG_mutation_correlation_with_unfolded_energy

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.ddG_mutation_correlation_with_unfolded_energy

n_optE_data_types

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.n_optE_data_types

prob_native_amino_acid

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.prob_native_amino_acid

prob_native_amino_acid_with_unfolded_energy

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.prob_native_amino_acid_with_unfolded_energy

prob_native_ligand_pose

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.prob_native_ligand_pose

prob_native_rotamer

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.prob_native_rotamer

prob_native_structure

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.prob_native_structure

pssm_data

Value:

rosetta.protocols.optimize_weights._protocols_optimize_weights_.OptEPo
sitionDataType.pssm_data