Package rosetta :: Package protocols :: Package generalized_kinematic_closure :: Package perturber :: Module _protocols_generalized_kinematic_closure_perturber_

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Module _protocols_generalized_kinematic_closure_perturber_

Classes

[hide private]

GeneralizedKICperturber
//////////////////////////////////////////////////////////////////// ////////////////////////////////////////////////////////////////////

GeneralizedKICperturberAP

GeneralizedKICperturberCAP

SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_core_chemical_ChemicalManager_TAP

SingletonBase_T_core_chemical_ChemicalManager_TCAP

perturber_effect
The effect of the perturber (e.g.

Variables

[hide private]

__package__ = None

end_of_effect_list = rosetta.protocols.generalized_kinematic_c...

no_effect = rosetta.protocols.generalized_kinematic_closure.pe...

perturb_backbone_by_bins = rosetta.protocols.generalized_kinem...

perturb_dihedral = rosetta.protocols.generalized_kinematic_clo...

perturb_dihedral_bbg = rosetta.protocols.generalized_kinematic...

randomize_alpha_backbone_by_rama = rosetta.protocols.generaliz...

randomize_backbone_by_bins = rosetta.protocols.generalized_kin...

randomize_dihedral = rosetta.protocols.generalized_kinematic_c...

sample_cis_peptide_bond = rosetta.protocols.generalized_kinema...

set_backbone_bin = rosetta.protocols.generalized_kinematic_clo...

set_bondangle = rosetta.protocols.generalized_kinematic_closur...

set_bondlength = rosetta.protocols.generalized_kinematic_closu...

set_dihedral = rosetta.protocols.generalized_kinematic_closure...

unknown_effect = rosetta.protocols.generalized_kinematic_closu...

Variables Details

[hide private]

end_of_effect_list

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.end_of_effect
_list

no_effect

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.no_effect

perturb_backbone_by_bins

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.perturb_backb
one_by_bins

perturb_dihedral

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.perturb_dihed
ral

perturb_dihedral_bbg

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.perturb_dihed
ral_bbg

randomize_alpha_backbone_by_rama

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.randomize_alp
ha_backbone_by_rama

randomize_backbone_by_bins

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.randomize_bac
kbone_by_bins

randomize_dihedral

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.randomize_dih
edral

sample_cis_peptide_bond

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.sample_cis_pe
ptide_bond

set_backbone_bin

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.set_backbone_
bin

set_bondangle

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.set_bondangle

set_bondlength

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.set_bondlengt
h

set_dihedral

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.set_dihedral

unknown_effect

Value:

rosetta.protocols.generalized_kinematic_closure.perturber._protocols_g
eneralized_kinematic_closure_perturber_.perturber_effect.unknown_effec
t