screener

Bindings for protocols::stepwise::legacy::screener namespace

class pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener

Bases: SampleApplier

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener, pose_atr_rep_screen: pyrosetta.rosetta.core.pose.Pose, atr_rep_checker: protocols::stepwise::modeler::protein::checker::ProteinAtrRepChecker) -> None

  2. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener) -> None

  3. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener) -> None

_pybind11_conduit_v1_()
add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) → None

C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void

apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) → None

C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void

assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener

C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &

check_screen(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener) → bool

C++: protocols::stepwise::legacy::screener::ProteinAtrRepScreener::check_screen() –> bool

count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → int

C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &

fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void

name(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener) → str

C++: protocols::stepwise::legacy::screener::ProteinAtrRepScreener::name() const –> std::string

pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &

reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void

set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) → None

C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void

set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) → None

C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void

type(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.ProteinAtrRepScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType

C++: protocols::stepwise::legacy::screener::ProteinAtrRepScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType

class pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener

Bases: StepWiseScreener

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener, atr_rep_checker: protocols::stepwise::modeler::rna::checker::RNA_AtrRepChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose) -> None

  2. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener) -> None

  3. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener) -> None

_pybind11_conduit_v1_()
add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) → None

C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void

apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) → None

C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void

assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener

C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &

check_screen(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener) → bool

C++: protocols::stepwise::legacy::screener::RNA_AtrRepScreener::check_screen() –> bool

count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → int

C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &

fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void

name(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener) → str

C++: protocols::stepwise::legacy::screener::RNA_AtrRepScreener::name() const –> std::string

reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void

set_exit_on_fail(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener, setting: bool) → None

C++: protocols::stepwise::legacy::screener::RNA_AtrRepScreener::set_exit_on_fail(const bool) –> void

set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) → None

C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void

type(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.RNA_AtrRepScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType

C++: protocols::stepwise::legacy::screener::RNA_AtrRepScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType

class pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection

Bases: StepWiseScreener

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection, pose: pyrosetta.rosetta.core.pose.Pose, moving_res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, options: protocols::stepwise::modeler::options::StepWiseModelerOptions, full_optimize: bool) -> None

  2. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) -> None

  3. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) -> None

_pybind11_conduit_v1_()
add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) → None

C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void

apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) → None

C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void

assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener

C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &

check_screen(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) → bool

C++: protocols::stepwise::legacy::screener::SimplePoseSelection::check_screen() –> bool

count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → int

C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &

fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

finalize(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) → None

C++: protocols::stepwise::legacy::screener::SimplePoseSelection::finalize() –> void

get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void

name(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) → str

C++: protocols::stepwise::legacy::screener::SimplePoseSelection::name() const –> std::string

pose_list(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t

C++: protocols::stepwise::legacy::screener::SimplePoseSelection::pose_list() –> class utility::vector1<class std::shared_ptr<class core::pose::Pose>, class std::allocator<class std::shared_ptr<class core::pose::Pose> > >

reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void

set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) → None

C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void

type(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimplePoseSelection) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType

C++: protocols::stepwise::legacy::screener::SimplePoseSelection::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType

class pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener

Bases: StepWiseScreener

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.utility.vector1_unsigned_long, arg2: pyrosetta.rosetta.core.pose.Pose, arg3: float) -> None

doc

  1. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener, pose: pyrosetta.rosetta.core.pose.Pose, calc_rms_res: pyrosetta.rosetta.utility.vector1_unsigned_long, native_pose: pyrosetta.rosetta.core.pose.Pose, rmsd_cutoff: float, force_align: bool) -> None

  2. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener) -> None

  3. __init__(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener, arg0: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener) -> None

_pybind11_conduit_v1_()
add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) → None

C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void

apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) → None

C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void

assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener

C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &

check_screen(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener) → bool

C++: protocols::stepwise::legacy::screener::SimpleRMSD_Screener::check_screen() –> bool

count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → int

C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &

fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) → None

C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void

increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void

name(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener) → str

C++: protocols::stepwise::legacy::screener::SimpleRMSD_Screener::name() const –> std::string

reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) → None

C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void

set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) → None

C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void

type(self: pyrosetta.rosetta.protocols.stepwise.legacy.screener.SimpleRMSD_Screener) → pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType

C++: protocols::stepwise::legacy::screener::SimpleRMSD_Screener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType