screener¶
Bindings for protocols::stepwise::screener namespace
- class pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.core.pose.Pose, arg2: pyrosetta.rosetta.utility.vector1_unsigned_long, arg3: float) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener, align_pose: pyrosetta.rosetta.core.pose.Pose, screening_pose: pyrosetta.rosetta.core.pose.Pose, moving_res_list_: pyrosetta.rosetta.utility.vector1_unsigned_long, rmsd_cutoff: float, do_screen: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) bool ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- do_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) bool ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::do_screen() const –> bool
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) str ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::name() const –> std::string
- pass_count(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) int ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::pass_count() const –> unsigned long
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_do_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener, setting: bool) None ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::set_do_screen(const bool &) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::AlignRMSD_Screener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener, anchor_sugar_modeling: pyrosetta.rosetta.protocols.stepwise.modeler.rna.sugar.SugarModeling, chain_closable_geometry_to_anchor_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, sugar_screening_pose: pyrosetta.rosetta.core.pose.Pose, is_prepend: bool, atr_rep_checker_with_instantiated_sugar: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_AtrRepChecker, atr_rep_checkers_for_anchor_sugar_models: pyrosetta.rosetta.utility.vector1_std_shared_ptr_protocols_stepwise_modeler_rna_checker_RNA_AtrRepChecker_t, tag_definition: protocols::stepwise::screener::TagDefinition) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::AnchorSugarScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- anchor_sugar_solution_number(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) int ¶
C++: protocols::stepwise::screener::AnchorSugarScreener::anchor_sugar_solution_number() const –> const unsigned long &
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) bool ¶
C++: protocols::stepwise::screener::AnchorSugarScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) str ¶
C++: protocols::stepwise::screener::AnchorSugarScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.AnchorSugarScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::AnchorSugarScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::BaseBinMapUpdater::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater) str ¶
C++: protocols::stepwise::screener::BaseBinMapUpdater::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseBinMapUpdater) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::BaseBinMapUpdater::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, arg0: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_BaseCentroidChecker, arg1: pyrosetta.rosetta.core.pose.Pose) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, base_centroid_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_BaseCentroidChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose, force_centroid_interaction: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, base_centroid_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_BaseCentroidChecker, moving_res_base_stub: pyrosetta.rosetta.core.kinematics.Stub) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener) bool ¶
C++: protocols::stepwise::screener::BaseCentroidScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::BaseCentroidScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener) str ¶
C++: protocols::stepwise::screener::BaseCentroidScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.BaseCentroidScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::BaseCentroidScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier, atr_rep_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_AtrRepChecker, base_centroid_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_BaseCentroidChecker, moving_res: int) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::BulgeApplier::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier, : pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier) pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier ¶
C++: protocols::stepwise::screener::BulgeApplier::operator=(const class protocols::stepwise::screener::BulgeApplier &) –> class protocols::stepwise::screener::BulgeApplier &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier) str ¶
C++: protocols::stepwise::screener::BulgeApplier::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.BulgeApplier) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::BulgeApplier::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener, screening_pose: pyrosetta.rosetta.core.pose.Pose, moving_res: int, reference_centroid: pyrosetta.rosetta.numeric.xyzVector_double_t, max_distance_squared: float) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener) bool ¶
C++: protocols::stepwise::screener::CentroidDistanceScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::CentroidDistanceScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener) str ¶
C++: protocols::stepwise::screener::CentroidDistanceScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.CentroidDistanceScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::CentroidDistanceScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative, moving_res: int) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative, arg0: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative, arg0: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::FastForwardToNextResidueAlternative::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative) str ¶
C++: protocols::stepwise::screener::FastForwardToNextResidueAlternative::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextResidueAlternative) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::FastForwardToNextResidueAlternative::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody, arg0: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody, arg0: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody, : pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody ¶
C++: protocols::stepwise::screener::FastForwardToNextRigidBody::operator=(const class protocols::stepwise::screener::FastForwardToNextRigidBody &) –> class protocols::stepwise::screener::FastForwardToNextRigidBody &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::FastForwardToNextRigidBody::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) str ¶
C++: protocols::stepwise::screener::FastForwardToNextRigidBody::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.FastForwardToNextRigidBody) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::FastForwardToNextRigidBody::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker, screener_whose_counts_to_check: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, final_screener: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, align_rmsd_screener: pyrosetta.rosetta.protocols.stepwise.screener.AlignRMSD_Screener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker, arg0: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker, arg0: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker, : pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker ¶
C++: protocols::stepwise::screener::IntegrationTestBreaker::operator=(const class protocols::stepwise::screener::IntegrationTestBreaker &) –> class protocols::stepwise::screener::IntegrationTestBreaker &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) bool ¶
C++: protocols::stepwise::screener::IntegrationTestBreaker::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::IntegrationTestBreaker::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) str ¶
C++: protocols::stepwise::screener::IntegrationTestBreaker::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.IntegrationTestBreaker) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::IntegrationTestBreaker::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener, o2prime_packer: pyrosetta.rosetta.protocols.stepwise.modeler.rna.o2prime.O2PrimePacker) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::O2PrimeScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener) bool ¶
C++: protocols::stepwise::screener::O2PrimeScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener) str ¶
C++: protocols::stepwise::screener::O2PrimeScreener::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.O2PrimeScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::O2PrimeScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.PackScreener¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener, pose: pyrosetta.rosetta.core.pose.Pose, stepwise_packer: pyrosetta.rosetta.protocols.stepwise.modeler.packer.StepWisePacker) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::PackScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener) bool ¶
C++: protocols::stepwise::screener::PackScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener) str ¶
C++: protocols::stepwise::screener::PackScreener::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.PackScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::PackScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener, pose: pyrosetta.rosetta.core.pose.Pose, working_parameters: pyrosetta.rosetta.protocols.stepwise.modeler.working_parameters.StepWiseWorkingParameters, use_loose_rep_cutoff: bool, options: pyrosetta.rosetta.core.scoring.methods.EnergyMethodOptions) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener) bool ¶
C++: protocols::stepwise::screener::PartitionContactScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener) str ¶
C++: protocols::stepwise::screener::PartitionContactScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.PartitionContactScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::PartitionContactScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener, phosphate_sampler: pyrosetta.rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::PhosphateScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener) bool ¶
C++: protocols::stepwise::screener::PhosphateScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener) str ¶
C++: protocols::stepwise::screener::PhosphateScreener::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.PhosphateScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::PhosphateScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener, pose: pyrosetta.rosetta.core.pose.Pose, scorefxn: pyrosetta.rosetta.core.scoring.ScoreFunction, stepwise_clusterer: pyrosetta.rosetta.protocols.stepwise.modeler.align.StepWiseClusterer) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener) bool ¶
C++: protocols::stepwise::screener::PoseSelectionScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener) str ¶
C++: protocols::stepwise::screener::PoseSelectionScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.PoseSelectionScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::PoseSelectionScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener, ccd_closer: pyrosetta.rosetta.protocols.stepwise.modeler.protein.loop_close.StepWiseProteinCCD_Closer, screening_pose: pyrosetta.rosetta.core.pose.Pose) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::ProteinCCD_ClosureScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener) bool ¶
C++: protocols::stepwise::screener::ProteinCCD_ClosureScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener) str ¶
C++: protocols::stepwise::screener::ProteinCCD_ClosureScreener::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.ProteinCCD_ClosureScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::ProteinCCD_ClosureScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener¶
Bases:
StepWiseResiduePairScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener, chain_closable_geometry_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener) bool ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryResidueBasedScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryResidueBasedScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener) str ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryResidueBasedScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryResidueBasedScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryResidueBasedScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener¶
Bases:
StepWiseResiduePairScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener, arg0: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, arg1: pyrosetta.rosetta.core.pose.Pose) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener, chain_closable_geometry_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose, finer_sampling_at_chain_closure: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener) bool ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener) str ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener¶
Bases:
StepWiseResiduePairScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, arg0: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, arg1: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t, arg2: pyrosetta.rosetta.core.kinematics.Stub, arg3: int, arg4: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, chain_closable_geometry_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, screening_pose_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t, moving_res_base_stub: pyrosetta.rosetta.core.kinematics.Stub, reference_res: int, moving_rsd_at_origin_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t, using_predefined_moving_rsd_list: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, chain_closable_geometry_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosableGeometryChecker, screening_pose_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t, moving_res_base_stub: pyrosetta.rosetta.core.kinematics.Stub, chain_break_reference_res: int) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener) bool ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryStubBasedScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryStubBasedScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener) str ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryStubBasedScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosableGeometryStubBasedScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::RNA_ChainClosableGeometryStubBasedScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, arg0: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosureChecker, arg1: pyrosetta.rosetta.core.pose.Pose) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, chain_closure_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosureChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose, just_do_closure_check: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, chain_closure_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_ChainClosureChecker) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::RNA_ChainClosureScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener) bool ¶
C++: protocols::stepwise::screener::RNA_ChainClosureScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::RNA_ChainClosureScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener) str ¶
C++: protocols::stepwise::screener::RNA_ChainClosureScreener::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.RNA_ChainClosureScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::RNA_ChainClosureScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener, screening_pose: pyrosetta.rosetta.core.pose.Pose, last_append_res: int, last_prepend_res: int, atom_atom_overlap_dist_cutoff: float) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener) bool ¶
C++: protocols::stepwise::screener::ResidueContactScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener) str ¶
C++: protocols::stepwise::screener::ResidueContactScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.ResidueContactScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::ResidueContactScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, arg0: pyrosetta.rosetta.core.pose.Pose) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, pose: pyrosetta.rosetta.core.pose.Pose, apply_residue_alternative_sampler: bool) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) bool ¶
C++: protocols::stepwise::screener::SampleApplier::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) str ¶
C++: protocols::stepwise::screener::SampleApplier::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::SampleApplier::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.Scorer¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer, pose: pyrosetta.rosetta.core.pose.Pose, scorefxn: pyrosetta.rosetta.core.scoring.ScoreFunction) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer, arg0: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer, arg0: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) bool ¶
C++: protocols::stepwise::screener::Scorer::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) str ¶
C++: protocols::stepwise::screener::Scorer::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.Scorer) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::Scorer::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, res1: int, res2: int) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener) str ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseResiduePairScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::StepWiseResiduePairScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener¶
Bases:
pybind11_object
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) str ¶
C++: protocols::stepwise::screener::StepWiseScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::StepWiseScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType¶
Bases:
pybind11_object
Members:
NONE
ALIGN_RMSD
ANCHOR_SUGAR
ATR_REP
BASE_BIN_MAP
BASE_CENTROID
BULGE_APPLIER
CENTROID_DISTANCE
FAST_FORWARD_TO_NEXT_RIGID_BODY
FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE
INTEGRATION_TEST
O2PRIME_PACK
PACK
PARTITION_CONTACT
PHOSPHATE_PACK
POSE_SELECTION
PROTEIN_ATR_REP
RESIDUE_APPLIER
RESIDUE_CONTACT
PROTEIN_CCD_CLOSURE
RNA_CHAIN_CLOSURE
RNA_CHAIN_CLOSABLE_GEOMETRY
RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED
RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED
SAMPLE_APPLIER
SAMPLE_APPLIER_WITH_RESIDUE_LIST
SCORER
SIMPLE_POSE_SELECTION
SIMPLE_RMSD
STUB_APPLIER
STUB_DISTANCE
SUGAR_INSTANTIATOR
TAG_DEFINITION
VDW_ATR_REP
VDW_BIN
- ALIGN_RMSD = <StepWiseScreenerType.ALIGN_RMSD: 1>¶
- ANCHOR_SUGAR = <StepWiseScreenerType.ANCHOR_SUGAR: 2>¶
- ATR_REP = <StepWiseScreenerType.ATR_REP: 3>¶
- BASE_BIN_MAP = <StepWiseScreenerType.BASE_BIN_MAP: 4>¶
- BASE_CENTROID = <StepWiseScreenerType.BASE_CENTROID: 5>¶
- BULGE_APPLIER = <StepWiseScreenerType.BULGE_APPLIER: 6>¶
- CENTROID_DISTANCE = <StepWiseScreenerType.CENTROID_DISTANCE: 7>¶
- FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE = <StepWiseScreenerType.FAST_FORWARD_TO_NEXT_RESIDUE_ALTERNATIVE: 9>¶
- FAST_FORWARD_TO_NEXT_RIGID_BODY = <StepWiseScreenerType.FAST_FORWARD_TO_NEXT_RIGID_BODY: 8>¶
- INTEGRATION_TEST = <StepWiseScreenerType.INTEGRATION_TEST: 10>¶
- NONE = <StepWiseScreenerType.NONE: 0>¶
- O2PRIME_PACK = <StepWiseScreenerType.O2PRIME_PACK: 11>¶
- PACK = <StepWiseScreenerType.PACK: 12>¶
- PARTITION_CONTACT = <StepWiseScreenerType.PARTITION_CONTACT: 13>¶
- PHOSPHATE_PACK = <StepWiseScreenerType.PHOSPHATE_PACK: 14>¶
- POSE_SELECTION = <StepWiseScreenerType.POSE_SELECTION: 15>¶
- PROTEIN_ATR_REP = <StepWiseScreenerType.PROTEIN_ATR_REP: 16>¶
- PROTEIN_CCD_CLOSURE = <StepWiseScreenerType.PROTEIN_CCD_CLOSURE: 19>¶
- RESIDUE_APPLIER = <StepWiseScreenerType.RESIDUE_APPLIER: 17>¶
- RESIDUE_CONTACT = <StepWiseScreenerType.RESIDUE_CONTACT: 18>¶
- RNA_CHAIN_CLOSABLE_GEOMETRY = <StepWiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY: 21>¶
- RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED = <StepWiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY_RESIDUE_BASED: 22>¶
- RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED = <StepWiseScreenerType.RNA_CHAIN_CLOSABLE_GEOMETRY_STUB_BASED: 23>¶
- RNA_CHAIN_CLOSURE = <StepWiseScreenerType.RNA_CHAIN_CLOSURE: 20>¶
- SAMPLE_APPLIER = <StepWiseScreenerType.SAMPLE_APPLIER: 24>¶
- SAMPLE_APPLIER_WITH_RESIDUE_LIST = <StepWiseScreenerType.SAMPLE_APPLIER_WITH_RESIDUE_LIST: 25>¶
- SCORER = <StepWiseScreenerType.SCORER: 26>¶
- SIMPLE_POSE_SELECTION = <StepWiseScreenerType.SIMPLE_POSE_SELECTION: 27>¶
- SIMPLE_RMSD = <StepWiseScreenerType.SIMPLE_RMSD: 28>¶
- STUB_APPLIER = <StepWiseScreenerType.STUB_APPLIER: 29>¶
- STUB_DISTANCE = <StepWiseScreenerType.STUB_DISTANCE: 30>¶
- SUGAR_INSTANTIATOR = <StepWiseScreenerType.SUGAR_INSTANTIATOR: 31>¶
- TAG_DEFINITION = <StepWiseScreenerType.TAG_DEFINITION: 32>¶
- VDW_ATR_REP = <StepWiseScreenerType.VDW_ATR_REP: 33>¶
- VDW_BIN = <StepWiseScreenerType.VDW_BIN: 34>¶
- __init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType, value: int) None ¶
- _pybind11_conduit_v1_()¶
- property name¶
- property value¶
- class pyrosetta.rosetta.protocols.stepwise.screener.StubApplier¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier, stub: pyrosetta.rosetta.core.kinematics.Stub) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) bool ¶
C++: protocols::stepwise::screener::StepWiseScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StubApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier) str ¶
C++: protocols::stepwise::screener::StubApplier::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.StubApplier) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::StubApplier::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener, moving_res_base_stub: pyrosetta.rosetta.core.kinematics.Stub, reference_stub: pyrosetta.rosetta.core.kinematics.Stub, max_distance_squared: float) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener) bool ¶
C++: protocols::stepwise::screener::StubDistanceScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StubDistanceScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener) str ¶
C++: protocols::stepwise::screener::StubDistanceScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.StubDistanceScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::StubDistanceScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator¶
Bases:
SampleApplier
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: int) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator, screening_pose: pyrosetta.rosetta.core.pose.Pose, moving_res: int, o2prime_instantiation_distance_cutoff: float) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator, arg0: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator, arg0: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::SugarInstantiator::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, mover: pyrosetta.rosetta.protocols.moves.CompositionMover, i: int, j: int) None ¶
C++: protocols::stepwise::screener::SampleApplier::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator) bool ¶
C++: protocols::stepwise::screener::SugarInstantiator::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, sampler: protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::SampleApplier::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator) str ¶
C++: protocols::stepwise::screener::SugarInstantiator::name() const –> std::string
- pose(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier) pyrosetta.rosetta.core.pose.Pose ¶
C++: protocols::stepwise::screener::SampleApplier::pose() –> class core::pose::Pose &
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_apply_residue_alternative_sampler_(self: pyrosetta.rosetta.protocols.stepwise.screener.SampleApplier, setting: bool) None ¶
C++: protocols::stepwise::screener::SampleApplier::set_apply_residue_alternative_sampler_(const bool) –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.SugarInstantiator) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::SugarInstantiator::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, arg2: bool) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, arg2: bool, arg3: int) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, arg2: bool, arg3: int, arg4: int) -> None
doc
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, pose: pyrosetta.rosetta.core.pose.Pose, first_sampler: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, sampler_include_torsion_value_in_tag_: bool, moving_res: int, reference_res: int, extra_tag: str) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, arg0: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- append_to_tag(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition, value: str) None ¶
C++: protocols::stepwise::screener::TagDefinition::append_to_tag(const std::string &) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) bool ¶
C++: protocols::stepwise::screener::TagDefinition::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) str ¶
C++: protocols::stepwise::screener::TagDefinition::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- tag(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) str ¶
C++: protocols::stepwise::screener::TagDefinition::tag() const –> std::string
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.TagDefinition) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::TagDefinition::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- class pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener¶
Bases:
StepWiseScreener
- __init__(*args, **kwargs)¶
Overloaded function.
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener, vdw_bin_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_VDW_BinChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose, moving_res: int) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener, vdw_bin_checker: pyrosetta.rosetta.protocols.stepwise.modeler.rna.checker.RNA_VDW_BinChecker, screening_pose: pyrosetta.rosetta.core.pose.Pose, moving_res: int, screening_moving_rsd_at_origin: pyrosetta.rosetta.core.conformation.Residue, moving_res_base_stub: pyrosetta.rosetta.core.kinematics.Stub) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener) -> None
__init__(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener, arg0: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener) -> None
- _pybind11_conduit_v1_()¶
- add_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, update_mover: pyrosetta.rosetta.protocols.moves.CompositionMover, restore_mover: pyrosetta.rosetta.protocols.moves.CompositionMover) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::add_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, class std::shared_ptr<class protocols::moves::CompositionMover>) –> void
- apply_mover(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.moves.CompositionMover, : int, : int) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::apply_mover(class std::shared_ptr<class protocols::moves::CompositionMover>, const unsigned long, const unsigned long) –> void
- assign(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener ¶
C++: protocols::stepwise::screener::StepWiseScreener::operator=(const class protocols::stepwise::screener::StepWiseScreener &) –> class protocols::stepwise::screener::StepWiseScreener &
- check_screen(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener) bool ¶
C++: protocols::stepwise::screener::VDW_BinScreener::check_screen() –> bool
- count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) int ¶
C++: protocols::stepwise::screener::StepWiseScreener::count() const –> const unsigned long &
- fast_forward(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener, sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler) None ¶
C++: protocols::stepwise::screener::VDW_BinScreener::fast_forward(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- get_update(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, : protocols::stepwise::sampler::StepWiseSampler) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::get_update(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>) –> void
- increment_count(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::increment_count() –> void
- name(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener) str ¶
C++: protocols::stepwise::screener::VDW_BinScreener::name() const –> std::string
- reset(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::reset() –> void
- set_ok_to_increment(self: pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreener, setting: bool) None ¶
C++: protocols::stepwise::screener::StepWiseScreener::set_ok_to_increment(const bool) –> void
- type(self: pyrosetta.rosetta.protocols.stepwise.screener.VDW_BinScreener) pyrosetta.rosetta.protocols.stepwise.screener.StepWiseScreenerType ¶
C++: protocols::stepwise::screener::VDW_BinScreener::type() const –> enum protocols::stepwise::screener::StepWiseScreenerType
- pyrosetta.rosetta.protocols.stepwise.screener.fast_forward_to_next_residue_pair(sampler: pyrosetta.rosetta.protocols.stepwise.sampler.StepWiseSampler, res1: int, res2: int) None ¶
C++: protocols::stepwise::screener::fast_forward_to_next_residue_pair(class std::shared_ptr<class protocols::stepwise::sampler::StepWiseSampler>, const unsigned long, const unsigned long) –> void