kinmatch

Bindings for protocols::kinmatch namespace

class pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK

Bases: FunGroupTK

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

class pyrosetta.rosetta.protocols.kinmatch.FunGroupTK

Bases: pybind11_object

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

class pyrosetta.rosetta.protocols.kinmatch.KRSQuery

Bases: pybind11_object

property angth

property axs

property cen

property clash

property disth

property ori

property type

class pyrosetta.rosetta.protocols.kinmatch.KRSQueryType

Bases: pybind11_object

Members:

CEN

CEN_ANG

CEN_AXS

CEN_AXS_ORI

CEN = <KRSQueryType.CEN: 0>

CEN_ANG = <KRSQueryType.CEN_ANG: 1>

CEN_AXS = <KRSQueryType.CEN_AXS: 2>

CEN_AXS_ORI = <KRSQueryType.CEN_AXS_ORI: 3>

property name

property value

class pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK

Bases: FunGroupTK

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits_out: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void