kinmatch

Bindings for protocols::kinmatch namespace

class pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK

Bases: FunGroupTK

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, arg0: pyrosetta.rosetta.core.pose.Pose) -> None

doc

2. __init__(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, p_in: pyrosetta.rosetta.core.pose.Pose, pos: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None

3. __init__(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, arg0: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK) -> None

4. __init__(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, arg0: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK) -> None

_pybind11_conduit_v1_()

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.BruteFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::BruteFunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

class pyrosetta.rosetta.protocols.kinmatch.FunGroupTK

Bases: pybind11_object

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, p_in: pyrosetta.rosetta.core.pose.Pose, pos: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None

2. __init__(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, arg0: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) -> None

_pybind11_conduit_v1_()

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::FunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

class pyrosetta.rosetta.protocols.kinmatch.KRSQuery

Bases: pybind11_object

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType) -> None

2. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, o: pyrosetta.rosetta.numeric.xyzVector_double_t) -> None

doc

3. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, o: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float) -> None

doc

4. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, o: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float, at: float) -> None

doc

5. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, o: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float, at: float, clsh: float) -> None

6. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t) -> None

doc

7. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float) -> None

doc

8. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float, at: float) -> None

doc

9. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, typ: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, c: pyrosetta.rosetta.numeric.xyzVector_double_t, a: pyrosetta.rosetta.numeric.xyzVector_double_t, dt: float, at: float, clsh: float) -> None

10. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, arg0: pyrosetta.rosetta.protocols.kinmatch.KRSQuery) -> None

_pybind11_conduit_v1_()

property angth

property axs

property cen

property clash

property disth

property ori

property type

class pyrosetta.rosetta.protocols.kinmatch.KRSQueryType

Bases: pybind11_object

Members:

CEN

CEN_ANG

CEN_AXS

CEN_AXS_ORI

CEN = <KRSQueryType.CEN: 0>

CEN_ANG = <KRSQueryType.CEN_ANG: 1>

CEN_AXS = <KRSQueryType.CEN_AXS: 2>

CEN_AXS_ORI = <KRSQueryType.CEN_AXS_ORI: 3>

__init__(self: pyrosetta.rosetta.protocols.kinmatch.KRSQueryType, value: int) → None

_pybind11_conduit_v1_()

property name

property value

class pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK

Bases: FunGroupTK

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, arg0: pyrosetta.rosetta.core.pose.Pose) -> None

doc

2. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, p_in: pyrosetta.rosetta.core.pose.Pose, pos: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None

3. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, arg0: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK) -> None

4. __init__(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, arg0: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK) -> None

_pybind11_conduit_v1_()

ifc(self: pyrosetta.rosetta.protocols.kinmatch.FunGroupTK) → protocols::scoring::ImplicitFastClashCheck

C++: protocols::kinmatch::FunGroupTK::ifc() const –> const class protocols::scoring::ImplicitFastClashCheck &

place_c(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits_out: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_c(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_d(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_d(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void

place_h(self: pyrosetta.rosetta.protocols.kinmatch.KinFunGroupTK, q: pyrosetta.rosetta.protocols.kinmatch.KRSQuery, qrsd: pyrosetta.rosetta.core.conformation.Residue, hits: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t) → None

C++: protocols::kinmatch::KinFunGroupTK::place_h(const struct protocols::kinmatch::KRSQuery &, const class core::conformation::Residue &, class utility::vector1<class std::shared_ptr<class core::conformation::Residue>, class std::allocator<class std::shared_ptr<class core::conformation::Residue> > > &) const –> void