scoring

Bindings for protocols::sewing::scoring namespace

class pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

Bases: pybind11_object

an interface for making Requirements that deal with Assemblies

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → float

C++: protocols::sewing::scoring::AssemblyScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → str

C++: protocols::sewing::scoring::AssemblyScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → float

C++: protocols::sewing::scoring::AssemblyScorer::get_old_last_score() const –> double

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → float

C++: protocols::sewing::scoring::AssemblyScorer::get_weight() const –> double

score(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::AssemblyScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : float) → None

C++: protocols::sewing::scoring::AssemblyScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : float) → None

C++: protocols::sewing::scoring::AssemblyScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::AssemblyScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : float) → None

C++: protocols::sewing::scoring::AssemblyScorer::set_weight(double) –> void

class pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator

Bases: pybind11_object

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator

C++: protocols::sewing::scoring::AssemblyScorerCreator::operator=(const class protocols::sewing::scoring::AssemblyScorerCreator &) –> class protocols::sewing::scoring::AssemblyScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator) → str

C++: protocols::sewing::scoring::AssemblyScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::AssemblyScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerFactory

Bases: SingletonBase_protocols_sewing_scoring_AssemblyScorerFactory_t

Create AssemblyScorers

static assembly_scorer_ct_namer(tag_name: str) → str

C++: protocols::sewing::scoring::AssemblyScorerFactory::assembly_scorer_ct_namer(std::string) –> std::string

static assembly_scorer_group_name() → str

C++: protocols::sewing::scoring::AssemblyScorerFactory::assembly_scorer_group_name() –> std::string

define_assembly_scorer_subtag(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerFactory, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::AssemblyScorerFactory::define_assembly_scorer_subtag(class utility::tag::XMLSchemaDefinition &) –> void

factory_register(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerFactory, creator: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerCreator) → None

C++: protocols::sewing::scoring::AssemblyScorerFactory::factory_register(class std::shared_ptr<const class protocols::sewing::scoring::AssemblyScorerCreator>) –> void

get_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorerFactory, type_name: str) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorerFactory::get_assembly_scorer(const std::string &) –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

static get_instance() → protocols::sewing::scoring::AssemblyScorerFactory

C++: utility::SingletonBase<protocols::sewing::scoring::AssemblyScorerFactory>::get_instance() –> class protocols::sewing::scoring::AssemblyScorerFactory *

class pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::InterModelMotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer) → str

C++: protocols::sewing::scoring::InterModelMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer) → float

C++: protocols::sewing::scoring::InterModelMotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::InterModelMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::InterModelMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::InterModelMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorer, : float) → None

C++: protocols::sewing::scoring::InterModelMotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::InterModelMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator

C++: protocols::sewing::scoring::InterModelMotifScorerCreator::operator=(const class protocols::sewing::scoring::InterModelMotifScorerCreator &) –> class protocols::sewing::scoring::InterModelMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::InterModelMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator) → str

C++: protocols::sewing::scoring::InterModelMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.InterModelMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::InterModelMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_maximum_unpenalized_variance(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer) → float

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::get_maximum_unpenalized_variance() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer) → str

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_optimum_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer) → float

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::get_optimum_distance() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer) → float

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_maximum_unpenalized_variance(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::set_maximum_unpenalized_variance(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_optimum_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::set_optimum_distance(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::set_weight(double) –> void

terminus_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::terminus_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static type_name() → str

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator::operator=(const class protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator &) –> class protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator) → str

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.IntraDesignTerminusMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::IntraDesignTerminusMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer

Bases: AssemblyScorer

an interface for making Requirements that deal with Assemblies

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer

C++: protocols::sewing::scoring::LigandAssemblyScorer::operator=(const class protocols::sewing::scoring::LigandAssemblyScorer &) –> class protocols::sewing::scoring::LigandAssemblyScorer &

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer) → float

C++: protocols::sewing::scoring::LigandAssemblyScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer) → str

C++: protocols::sewing::scoring::LigandAssemblyScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer) → float

C++: protocols::sewing::scoring::LigandAssemblyScorer::get_old_last_score() const –> double

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer) → float

C++: protocols::sewing::scoring::LigandAssemblyScorer::get_weight() const –> double

score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::LigandAssemblyScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, : float) → None

C++: protocols::sewing::scoring::LigandAssemblyScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, : float) → None

C++: protocols::sewing::scoring::LigandAssemblyScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::LigandAssemblyScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandAssemblyScorer, : float) → None

C++: protocols::sewing::scoring::LigandAssemblyScorer::set_weight(double) –> void

class pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer

Bases: LigandAssemblyScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer

C++: protocols::sewing::scoring::LigandScorer::operator=(const class protocols::sewing::scoring::LigandScorer &) –> class protocols::sewing::scoring::LigandScorer &

get_angle_multiplier(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, theta_positive: float) → float

C++: protocols::sewing::scoring::LigandScorer::get_angle_multiplier(double) –> double

get_cutoff_angle(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → float

C++: protocols::sewing::scoring::LigandScorer::get_cutoff_angle() const –> double

get_cutoff_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → float

C++: protocols::sewing::scoring::LigandScorer::get_cutoff_distance() const –> double

get_func(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → pyrosetta.rosetta.core.scoring.func.Func

C++: protocols::sewing::scoring::LigandScorer::get_func() const –> class std::shared_ptr<const class core::scoring::func::Func>

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → float

C++: protocols::sewing::scoring::LigandScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → str

C++: protocols::sewing::scoring::LigandScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → float

C++: protocols::sewing::scoring::LigandScorer::get_old_last_score() const –> double

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer) → float

C++: protocols::sewing::scoring::LigandScorer::get_weight() const –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::LigandScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::LigandScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_cutoff_angle(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : float) → None

C++: protocols::sewing::scoring::LigandScorer::set_cutoff_angle(double) –> void

set_cutoff_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : float) → None

C++: protocols::sewing::scoring::LigandScorer::set_cutoff_distance(double) –> void

set_func(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : pyrosetta.rosetta.core.scoring.func.Func) → None

C++: protocols::sewing::scoring::LigandScorer::set_func(class std::shared_ptr<class core::scoring::func::Func>) –> void

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : float) → None

C++: protocols::sewing::scoring::LigandScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : float) → None

C++: protocols::sewing::scoring::LigandScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::LigandScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorer, : float) → None

C++: protocols::sewing::scoring::LigandScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::LigandScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator

C++: protocols::sewing::scoring::LigandScorerCreator::operator=(const class protocols::sewing::scoring::LigandScorerCreator &) –> class protocols::sewing::scoring::LigandScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::LigandScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator) → str

C++: protocols::sewing::scoring::LigandScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.LigandScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::LigandScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer

Bases: AssemblyScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → str

C++: protocols::sewing::scoring::MotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::MotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::MotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, : float) → None

C++: protocols::sewing::scoring::MotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::MotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator

C++: protocols::sewing::scoring::MotifScorerCreator::operator=(const class protocols::sewing::scoring::MotifScorerCreator &) –> class protocols::sewing::scoring::MotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::MotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator) → str

C++: protocols::sewing::scoring::MotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::MotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer) → str

C++: protocols::sewing::scoring::PartnerMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer) → float

C++: protocols::sewing::scoring::PartnerMotifScorer::get_weight() const –> double

interface_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::PartnerMotifScorer::interface_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::PartnerMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::PartnerMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::PartnerMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorer, : float) → None

C++: protocols::sewing::scoring::PartnerMotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::PartnerMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator

C++: protocols::sewing::scoring::PartnerMotifScorerCreator::operator=(const class protocols::sewing::scoring::PartnerMotifScorerCreator &) –> class protocols::sewing::scoring::PartnerMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::PartnerMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator) → str

C++: protocols::sewing::scoring::PartnerMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.PartnerMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::PartnerMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

contact_order_score(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::SegmentContactOrderScorer::contact_order_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer) → str

C++: protocols::sewing::scoring::SegmentContactOrderScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer) → float

C++: protocols::sewing::scoring::SegmentContactOrderScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::SegmentContactOrderScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::SegmentContactOrderScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::SegmentContactOrderScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorer, : float) → None

C++: protocols::sewing::scoring::SegmentContactOrderScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::SegmentContactOrderScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator

C++: protocols::sewing::scoring::SegmentContactOrderScorerCreator::operator=(const class protocols::sewing::scoring::SegmentContactOrderScorerCreator &) –> class protocols::sewing::scoring::SegmentContactOrderScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::SegmentContactOrderScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator) → str

C++: protocols::sewing::scoring::SegmentContactOrderScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.SegmentContactOrderScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::SegmentContactOrderScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::StartingNodeMotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer) → str

C++: protocols::sewing::scoring::StartingNodeMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer) → float

C++: protocols::sewing::scoring::StartingNodeMotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::StartingNodeMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::StartingNodeMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::StartingNodeMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorer, : float) → None

C++: protocols::sewing::scoring::StartingNodeMotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::StartingNodeMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator

C++: protocols::sewing::scoring::StartingNodeMotifScorerCreator::operator=(const class protocols::sewing::scoring::StartingNodeMotifScorerCreator &) –> class protocols::sewing::scoring::StartingNodeMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::StartingNodeMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator) → str

C++: protocols::sewing::scoring::StartingNodeMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.StartingNodeMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::StartingNodeMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer) → str

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_region_end(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer) → int

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::get_region_end() const –> unsigned long

get_region_start(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer) → int

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::get_region_start() const –> unsigned long

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_starts_and_ends(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer) → str

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::get_starts_and_ends() const –> std::string

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer) → float

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::get_weight() const –> double

interface_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::interface_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_region_end(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, : int) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::set_region_end(unsigned long) –> void

set_region_start(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, : int) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::set_region_start(unsigned long) –> void

set_starts_and_ends(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, : str) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::set_starts_and_ends(std::string) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorer, : float) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::SubsetPartnerMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator

C++: protocols::sewing::scoring::SubsetPartnerMotifScorerCreator::operator=(const class protocols::sewing::scoring::SubsetPartnerMotifScorerCreator &) –> class protocols::sewing::scoring::SubsetPartnerMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::SubsetPartnerMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator) → str

C++: protocols::sewing::scoring::SubsetPartnerMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.SubsetPartnerMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::SubsetPartnerMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_maximum_unpenalized_variance(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → float

C++: protocols::sewing::scoring::TerminusMotifScorer::get_maximum_unpenalized_variance() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → str

C++: protocols::sewing::scoring::TerminusMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_optimum_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → float

C++: protocols::sewing::scoring::TerminusMotifScorer::get_optimum_distance() const –> double

get_partner_residue(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → int

C++: protocols::sewing::scoring::TerminusMotifScorer::get_partner_residue() const –> unsigned long

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_terminus(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → str

C++: protocols::sewing::scoring::TerminusMotifScorer::get_terminus() const –> char

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer) → float

C++: protocols::sewing::scoring::TerminusMotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::MotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::TerminusMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_maximum_unpenalized_variance(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_maximum_unpenalized_variance(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_optimum_distance(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_optimum_distance(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_partner_residue(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, : int) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_partner_residue(unsigned long) –> void

set_terminus(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, : str) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_terminus(char) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, : float) → None

C++: protocols::sewing::scoring::TerminusMotifScorer::set_weight(double) –> void

terminus_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::TerminusMotifScorer::terminus_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static type_name() → str

C++: protocols::sewing::scoring::TerminusMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator

C++: protocols::sewing::scoring::TerminusMotifScorerCreator::operator=(const class protocols::sewing::scoring::TerminusMotifScorerCreator &) –> class protocols::sewing::scoring::TerminusMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::TerminusMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator) → str

C++: protocols::sewing::scoring::TerminusMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.TerminusMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::TerminusMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer

Bases: MotifScorer

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer, : pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::AssemblyScorer::operator=(const class protocols::sewing::scoring::AssemblyScorer &) –> class protocols::sewing::scoring::AssemblyScorer &

full_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::TopNMotifScorer::full_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

get_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_last_score() const –> double

get_name(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer) → str

C++: protocols::sewing::scoring::TopNMotifScorer::get_name() const –> std::string

get_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer) → float

C++: protocols::sewing::scoring::MotifScorer::get_old_last_score() const –> double

get_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, stub1: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss1: str, aa1: str, stub2: pyrosetta.rosetta.numeric.xyzTransform_double_t, ss2: str, aa2: str) → float

C++: protocols::sewing::scoring::MotifScorer::get_score(class numeric::xyzTransform<double>, char, char, class numeric::xyzTransform<double>, char, char) const –> double

get_scores_to_keep(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer) → int

C++: protocols::sewing::scoring::TopNMotifScorer::get_scores_to_keep() const –> unsigned long

get_stub(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, residue: pyrosetta.rosetta.protocols.sewing.data_storage.SmartSewingResidue) → pyrosetta.rosetta.numeric.xyzTransform_double_t

C++: protocols::sewing::scoring::MotifScorer::get_stub(class std::shared_ptr<const class protocols::sewing::data_storage::SmartSewingResidue>) const –> class numeric::xyzTransform<double>

get_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer) → float

C++: protocols::sewing::scoring::TopNMotifScorer::get_weight() const –> double

norm_motif_score(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::TopNMotifScorer::norm_motif_score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

static provide_xml_schema(: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::TopNMotifScorer::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

score(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, assembly: pyrosetta.rosetta.protocols.sewing.data_storage.SmartAssembly) → float

C++: protocols::sewing::scoring::TopNMotifScorer::score(class std::shared_ptr<const class protocols::sewing::data_storage::SmartAssembly>) –> double

set_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_last_score(double) –> void

set_old_last_score(self: pyrosetta.rosetta.protocols.sewing.scoring.MotifScorer, score: float) → None

C++: protocols::sewing::scoring::MotifScorer::set_old_last_score(double) –> void

set_options_from_tag(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, scorer_tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::sewing::scoring::TopNMotifScorer::set_options_from_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

set_scores_to_keep(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, : int) → None

C++: protocols::sewing::scoring::TopNMotifScorer::set_scores_to_keep(unsigned long) –> void

set_weight(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorer, : float) → None

C++: protocols::sewing::scoring::TopNMotifScorer::set_weight(double) –> void

static type_name() → str

C++: protocols::sewing::scoring::TopNMotifScorer::type_name() –> std::string

class pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator

Bases: AssemblyScorerCreator

The Creator class is responsible for creating a particular GlobalRequirement class.

assign(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator, : pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator

C++: protocols::sewing::scoring::TopNMotifScorerCreator::operator=(const class protocols::sewing::scoring::TopNMotifScorerCreator &) –> class protocols::sewing::scoring::TopNMotifScorerCreator &

create_assembly_scorer(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator) → pyrosetta.rosetta.protocols.sewing.scoring.AssemblyScorer

C++: protocols::sewing::scoring::TopNMotifScorerCreator::create_assembly_scorer() const –> class std::shared_ptr<class protocols::sewing::scoring::AssemblyScorer>

keyname(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator) → str

C++: protocols::sewing::scoring::TopNMotifScorerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.sewing.scoring.TopNMotifScorerCreator, : pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::sewing::scoring::TopNMotifScorerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void