filters

Bindings for protocols::indexed_structure_store::filters namespace

class pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter

Bases: pyrosetta.rosetta.protocols.filters.Filter

apply(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, pose: pyrosetta.rosetta.core.pose.Pose) bool

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::apply(const class core::pose::Pose &) const –> bool

static class_name() str

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::class_name() –> std::string

clear(self: pyrosetta.rosetta.protocols.filters.Filter) None

used to clear internal variables if needed. Using fresh_instance is preferred since it’s a pure virtual

C++: protocols::filters::Filter::clear() –> void

clone(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter) pyrosetta.rosetta.protocols.filters.Filter

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::clone() const –> class std::shared_ptr<class protocols::filters::Filter>

compute(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, pose: pyrosetta.rosetta.core.pose.Pose) int

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::compute(const class core::pose::Pose &) const –> unsigned long

fragment_specification(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter) pyrosetta.rosetta.protocols.indexed_structure_store.FragmentSpecification

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::fragment_specification() –> const struct protocols::indexed_structure_store::FragmentSpecification &

fresh_instance(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter) pyrosetta.rosetta.protocols.filters.Filter

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::fresh_instance() const –> class std::shared_ptr<class protocols::filters::Filter>

get_type(self: pyrosetta.rosetta.protocols.filters.Filter) str

C++: protocols::filters::Filter::get_type() const –> std::string

get_user_defined_name(self: pyrosetta.rosetta.protocols.filters.Filter) str

C++: protocols::filters::Filter::get_user_defined_name() const –> std::string

lookup_result(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter) pyrosetta.rosetta.std.map_unsigned_long_protocols_indexed_structure_store_FragmentLookupResult

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::lookup_result() –> const class std::map<unsigned long, class protocols::indexed_structure_store::FragmentLookupResult, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, class protocols::indexed_structure_store::FragmentLookupResult> > > &

name(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter) str

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::name() const –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, tag: pyrosetta.rosetta.utility.tag.Tag, : pyrosetta.rosetta.basic.datacache.DataMap) None

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) None

Provide the citation.

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) None

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

report(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, : pyrosetta.rosetta.std.ostream, : pyrosetta.rosetta.core.pose.Pose) None

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::report(std::ostream &, const class core::pose::Pose &) const –> void

report_sm(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, pose: pyrosetta.rosetta.core.pose.Pose) float

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::report_sm(const class core::pose::Pose &) const –> double

score(self: pyrosetta.rosetta.protocols.filters.Filter, pose: pyrosetta.rosetta.core.pose.Pose) float

C++: protocols::filters::Filter::score(class core::pose::Pose &) –> double

set_chain(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilter, chainid: int) None

sets chain

C++: protocols::indexed_structure_store::filters::FragmentLookupFilter::set_chain(const unsigned long) –> void

set_user_defined_name(self: pyrosetta.rosetta.protocols.filters.Filter, name: str) None

C++: protocols::filters::Filter::set_user_defined_name(const std::string &) –> void

class pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator

Bases: pyrosetta.rosetta.protocols.filters.FilterCreator

assign(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator, : pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator) pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator

C++: protocols::indexed_structure_store::filters::FragmentLookupFilterCreator::operator=(const class protocols::indexed_structure_store::filters::FragmentLookupFilterCreator &) –> class protocols::indexed_structure_store::filters::FragmentLookupFilterCreator &

create_filter(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator) pyrosetta.rosetta.protocols.filters.Filter

C++: protocols::indexed_structure_store::filters::FragmentLookupFilterCreator::create_filter() const –> class std::shared_ptr<class protocols::filters::Filter>

keyname(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator) str

C++: protocols::indexed_structure_store::filters::FragmentLookupFilterCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.indexed_structure_store.filters.FragmentLookupFilterCreator, xsd: utility::tag::XMLSchemaDefinition) None

C++: protocols::indexed_structure_store::filters::FragmentLookupFilterCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.indexed_structure_store.filters.LookupMode

Bases: pybind11_builtins.pybind11_object

Members:

First

Closest

Closest = <LookupMode.Closest: 1>
First = <LookupMode.First: 0>
property name