selectors

Bindings for protocols::fold_from_loops::selectors namespace

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

angle(*args, **kwargs)

Overloaded function.

  1. angle(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) -> bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::angle() const –> bool

  1. angle(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, pick: bool) -> None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::angle(bool) –> void

apply(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::apply(const class core::pose::Pose &) const –> class utility::vector1<bool, class std::allocator<bool> >

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::operator=(const class protocols::fold_from_loops::selectors::ConstraintResidueSelector &) –> class protocols::fold_from_loops::selectors::ConstraintResidueSelector &

static class_name() str

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::class_name() –> std::string

clone(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

Clone operator.

Copy this object and return an owning pointer to the new object.

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::clone() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

static default_angle() bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::default_angle() –> bool

static default_dihedral() bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::default_dihedral() –> bool

static default_distance() bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::default_distance() –> bool

dihedral(*args, **kwargs)

Overloaded function.

  1. dihedral(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) -> bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::dihedral() const –> bool

  1. dihedral(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, pick: bool) -> None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::dihedral(bool) –> void

distance(*args, **kwargs)

Overloaded function.

  1. distance(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) -> bool

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::distance() const –> bool

  1. distance(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, pick: bool) -> None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::distance(bool) –> void

get_name(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector) str

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::get_name() const –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelector, tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) None
Provide citations to the passed CitationCollectionList

Subclasses should add the info for themselves and any other classes they use.

The default implementation of this function does nothing. It may be overriden by residue selectors wishing to provide citation information.

C++: core::select::residue_selector::ResidueSelector::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelector::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

selection_positions(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_unsigned_long

Calls apply and returns the Rosetta numbering corresponding to the selected residues

C++: core::select::residue_selector::ResidueSelector::selection_positions(const class core::pose::Pose &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelectorCreator

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator) pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator::operator=(const class protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator &) –> class protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator &

create_residue_selector(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator::create_residue_selector() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

keyname(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator) str

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ConstraintResidueSelectorCreator, : utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::ConstraintResidueSelectorCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

apply(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_bool

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::apply(const class core::pose::Pose &) const –> class utility::vector1<bool, class std::allocator<bool> >

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector) pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::operator=(const class protocols::fold_from_loops::selectors::CutpointResidueSelector &) –> class protocols::fold_from_loops::selectors::CutpointResidueSelector &

static class_name() str

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::class_name() –> std::string

clone(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

Clone operator.

Copy this object and return an owning pointer to the new object.

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::clone() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

get_name(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector) str

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::get_name() const –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector, tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) None

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) None
Provide citations to the passed CitationCollectionList

Subclasses should add the info for themselves and any other classes they use.

The default implementation of this function does nothing. It may be overriden by residue selectors wishing to provide citation information.

C++: core::select::residue_selector::ResidueSelector::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

selection_positions(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_unsigned_long

Calls apply and returns the Rosetta numbering corresponding to the selected residues

C++: core::select::residue_selector::ResidueSelector::selection_positions(const class core::pose::Pose &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

use_foldtree(*args, **kwargs)

Overloaded function.

  1. use_foldtree(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector, pick: bool) -> None

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::use_foldtree(bool) –> void

  1. use_foldtree(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelector) -> bool

C++: protocols::fold_from_loops::selectors::CutpointResidueSelector::use_foldtree() const –> bool

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelectorCreator

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator) pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator

C++: protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator::operator=(const class protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator &) –> class protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator &

create_residue_selector(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

C++: protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator::create_residue_selector() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

keyname(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator) str

C++: protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.CutpointResidueSelectorCreator, : utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::CutpointResidueSelectorCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

apply(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_bool

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::apply(const class core::pose::Pose &) const –> class utility::vector1<bool, class std::allocator<bool> >

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector) pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::operator=(const class protocols::fold_from_loops::selectors::ProteinResidueSelector &) –> class protocols::fold_from_loops::selectors::ProteinResidueSelector &

static class_name() str

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::class_name() –> std::string

clone(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

Clone operator.

Copy this object and return an owning pointer to the new object.

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::clone() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

get_name(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector) str

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::get_name() const –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelector, tag: pyrosetta.rosetta.utility.tag.Tag, datamap: pyrosetta.rosetta.basic.datacache.DataMap) None

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) None
Provide citations to the passed CitationCollectionList

Subclasses should add the info for themselves and any other classes they use.

The default implementation of this function does nothing. It may be overriden by residue selectors wishing to provide citation information.

C++: core::select::residue_selector::ResidueSelector::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::ProteinResidueSelector::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

selection_positions(self: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector, pose: pyrosetta.rosetta.core.pose.Pose) pyrosetta.rosetta.utility.vector1_unsigned_long

Calls apply and returns the Rosetta numbering corresponding to the selected residues

C++: core::select::residue_selector::ResidueSelector::selection_positions(const class core::pose::Pose &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

class pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator

Bases: pyrosetta.rosetta.core.select.residue_selector.ResidueSelectorCreator

assign(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator, : pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator) pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator

C++: protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator::operator=(const class protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator &) –> class protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator &

create_residue_selector(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator) pyrosetta.rosetta.core.select.residue_selector.ResidueSelector

C++: protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator::create_residue_selector() const –> class std::shared_ptr<class core::select::residue_selector::ResidueSelector>

keyname(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator) str

C++: protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.fold_from_loops.selectors.ProteinResidueSelectorCreator, : utility::tag::XMLSchemaDefinition) None

C++: protocols::fold_from_loops::selectors::ProteinResidueSelectorCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void