simple_movers

Bindings for protocols::grafting::simple_movers namespace

class pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover

Bases: Mover

Delete a region of a pose. Mover Wrapper to grafting utility function.

apply(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::apply(class core::pose::Pose &) –> void

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, : pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover) → pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover

C++: protocols::grafting::simple_movers::DeleteRegionMover::operator=(const class protocols::grafting::simple_movers::DeleteRegionMover &) –> class protocols::grafting::simple_movers::DeleteRegionMover &

clear_info(self: pyrosetta.rosetta.protocols.moves.Mover) → None

Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file.

clear_info is called by jd2 before calling apply

C++: protocols::moves::Mover::clear_info() –> void

clone(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::DeleteRegionMover::clone() const –> class std::shared_ptr<class protocols::moves::Mover>

create(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::create() –> class std::shared_ptr<class protocols::moves::Mover>

fresh_instance(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::DeleteRegionMover::fresh_instance() const –> class std::shared_ptr<class protocols::moves::Mover>

get_additional_output(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

fpd

Mechanism by which a mover may return multiple output poses from a single input pose.

Supported in JD2. Will attempt to grab additional poses until a nullptr is returned.

C++: protocols::moves::Mover::get_additional_output() –> class std::shared_ptr<class core::pose::Pose>

get_current_job(self: pyrosetta.rosetta.protocols.moves.Mover) → protocols::jobdist::BasicJob

C++: protocols::moves::Mover::get_current_job() const –> class std::shared_ptr<const class protocols::jobdist::BasicJob>

get_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover) → str
A tag is a unique identifier used to identify structures produced

by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) sets the tag. This functionality is not intended for use with the 2008 job distributor.

C++: protocols::moves::Mover::get_current_tag() const –> std::string

get_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_input_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_last_move_status(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.MoverStatus

returns status after an apply(). The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say “that run was no good, skip it” then use the protected last_move_status(MoverStatus) to change the value that this function will return.

C++: protocols::moves::Mover::get_last_move_status() const –> enum protocols::moves::MoverStatus

get_name(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover) → str

C++: protocols::grafting::simple_movers::DeleteRegionMover::get_name() const –> std::string

get_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_native_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_self_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::get_self_ptr() –> class std::shared_ptr<class protocols::moves::Mover>

get_self_weak_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.weak_ptr_protocols_moves_Mover_t

C++: protocols::moves::Mover::get_self_weak_ptr() –> class std::weak_ptr<class protocols::moves::Mover>

get_type(self: pyrosetta.rosetta.protocols.moves.Mover) → str

C++: protocols::moves::Mover::get_type() const –> std::string

info(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.list_std_string_t

non-const accessor

C++: protocols::moves::Mover::info() –> class std::list<std::string, class std::allocator<std::string > > &

last_proposal_density_ratio(self: pyrosetta.rosetta.protocols.moves.Mover) → float

C++: protocols::moves::Mover::last_proposal_density_ratio() –> double

static mover_name() → str

C++: protocols::grafting::simple_movers::DeleteRegionMover::mover_name() –> std::string

static name() → str

C++: protocols::moves::Mover::name() –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, tag: pyrosetta.rosetta.utility.tag.Tag, data: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) → None

Provide the citation.

C++: protocols::grafting::simple_movers::DeleteRegionMover::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

region(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, res_start: str, res_end: str) → None

Set the region of the pose where deletion will occur

C++: protocols::grafting::simple_movers::DeleteRegionMover::region(const std::string &, const std::string &) –> void

static register_options() → None

Overload this static method if you access options within the mover.

These options will end up in -help of your application if users of this mover call register_options. Do this recursively! If you use movers within your mover, call their register_options in your register_options() method.

C++: protocols::moves::Mover::register_options() –> void

reinitialize_for_each_job(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be freshly regenerated on

each use.

C++: protocols::moves::Mover::reinitialize_for_each_job() const –> bool

reinitialize_for_new_input(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be regenerated when the input

pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for that one input pose).

C++: protocols::moves::Mover::reinitialize_for_new_input() const –> bool

reset_status(self: pyrosetta.rosetta.protocols.moves.Mover) → None

resets status to SUCCESS, meant to be used before an apply(). The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.

C++: protocols::moves::Mover::reset_status() –> void

set_add_jump_on_rechain(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, add: bool) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::set_add_jump_on_rechain(bool) –> void

set_add_terminal_types_on_rechain(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, add: bool) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::set_add_terminal_types_on_rechain(bool) –> void

set_current_job(self: pyrosetta.rosetta.protocols.moves.Mover, job: protocols::jobdist::BasicJob) → None

C++: protocols::moves::Mover::set_current_job(class std::shared_ptr<const class protocols::jobdist::BasicJob>) –> void

set_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover, new_tag: str) → None

C++: protocols::moves::Mover::set_current_tag(const std::string &) –> void

set_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for poses contained for rms

C++: protocols::moves::Mover::set_input_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for native poses contained for rms —- we should get rid of this method? it is widely used, but a bit unsafe

C++: protocols::moves::Mover::set_native_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_rechain(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, rechain: bool) → None

C++: protocols::grafting::simple_movers::DeleteRegionMover::set_rechain(bool) –> void

set_residue_selector(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMover, selector: pyrosetta.rosetta.core.select.residue_selector.ResidueSelector) → None

Sets the residue selector

C++: protocols::grafting::simple_movers::DeleteRegionMover::set_residue_selector(class std::shared_ptr<const class core::select::residue_selector::ResidueSelector>) –> void

set_type(self: pyrosetta.rosetta.protocols.moves.Mover, setting: str) → None

Set the ‘type’ string

C++: protocols::moves::Mover::set_type(const std::string &) –> void

show(*args, **kwargs)

Overloaded function.

  1. show(self: pyrosetta.rosetta.protocols.moves.Mover) -> None

  2. show(self: pyrosetta.rosetta.protocols.moves.Mover, output: pyrosetta.rosetta.std.ostream) -> None

Outputs details about the Mover, including current settings.

C++: protocols::moves::Mover::show(std::ostream &) const –> void

test_move(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None
: Unit test support function. Apply one move to a given pose.

Allows extra test specific functions to be called before applying

C++: protocols::moves::Mover::test_move(class core::pose::Pose &) –> void

type(*args, **kwargs)

Overloaded function.

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover, type_in: str) -> None

Set the ‘type’ string

C++: protocols::moves::Mover::type(const std::string &) –> void

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover) -> str

Get the set ‘type’ string

C++: protocols::moves::Mover::type() const –> const std::string &

class pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator

Bases: MoverCreator

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator, : pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator) → pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator

C++: protocols::grafting::simple_movers::DeleteRegionMoverCreator::operator=(const class protocols::grafting::simple_movers::DeleteRegionMoverCreator &) –> class protocols::grafting::simple_movers::DeleteRegionMoverCreator &

create_mover(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::DeleteRegionMoverCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator) → str

C++: protocols::grafting::simple_movers::DeleteRegionMoverCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.grafting.simple_movers.DeleteRegionMoverCreator, xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::DeleteRegionMoverCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover

Bases: Mover

Insert a whole pose into another. Loops, linkers, whaterver. No modeling here. Wrapper to utility function insert_pose_into_pose.

Residues between start + end should be deleted before using this mover if needed.

apply(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::apply(class core::pose::Pose &) –> void

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, : pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover) → pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::operator=(const class protocols::grafting::simple_movers::InsertPoseIntoPoseMover &) –> class protocols::grafting::simple_movers::InsertPoseIntoPoseMover &

clear_info(self: pyrosetta.rosetta.protocols.moves.Mover) → None

Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file.

clear_info is called by jd2 before calling apply

C++: protocols::moves::Mover::clear_info() –> void

clone(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::clone() const –> class std::shared_ptr<class protocols::moves::Mover>

create(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::create() –> class std::shared_ptr<class protocols::moves::Mover>

end(*args, **kwargs)

Overloaded function.

  1. end(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, res_end: str) -> None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::end(const std::string &) –> void

  1. end(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover) -> str

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::end() const –> const std::string &

fresh_instance(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

Generates a new Mover object freshly created with the default ctor.

C++: protocols::moves::Mover::fresh_instance() const –> class std::shared_ptr<class protocols::moves::Mover>

get_additional_output(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

fpd

Mechanism by which a mover may return multiple output poses from a single input pose.

Supported in JD2. Will attempt to grab additional poses until a nullptr is returned.

C++: protocols::moves::Mover::get_additional_output() –> class std::shared_ptr<class core::pose::Pose>

get_current_job(self: pyrosetta.rosetta.protocols.moves.Mover) → protocols::jobdist::BasicJob

C++: protocols::moves::Mover::get_current_job() const –> class std::shared_ptr<const class protocols::jobdist::BasicJob>

get_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover) → str
A tag is a unique identifier used to identify structures produced

by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) sets the tag. This functionality is not intended for use with the 2008 job distributor.

C++: protocols::moves::Mover::get_current_tag() const –> std::string

get_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_input_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_last_move_status(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.MoverStatus

returns status after an apply(). The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say “that run was no good, skip it” then use the protected last_move_status(MoverStatus) to change the value that this function will return.

C++: protocols::moves::Mover::get_last_move_status() const –> enum protocols::moves::MoverStatus

get_name(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover) → str

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::get_name() const –> std::string

get_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_native_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_self_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::get_self_ptr() –> class std::shared_ptr<class protocols::moves::Mover>

get_self_weak_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.weak_ptr_protocols_moves_Mover_t

C++: protocols::moves::Mover::get_self_weak_ptr() –> class std::weak_ptr<class protocols::moves::Mover>

get_type(self: pyrosetta.rosetta.protocols.moves.Mover) → str

C++: protocols::moves::Mover::get_type() const –> std::string

info(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.list_std_string_t

non-const accessor

C++: protocols::moves::Mover::info() –> class std::list<std::string, class std::allocator<std::string > > &

last_proposal_density_ratio(self: pyrosetta.rosetta.protocols.moves.Mover) → float

C++: protocols::moves::Mover::last_proposal_density_ratio() –> double

static mover_name() → str

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::mover_name() –> std::string

static name() → str

C++: protocols::moves::Mover::name() –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, tag: pyrosetta.rosetta.utility.tag.Tag, data: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) → None

Provide the citation.

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

static register_options() → None

Overload this static method if you access options within the mover.

These options will end up in -help of your application if users of this mover call register_options. Do this recursively! If you use movers within your mover, call their register_options in your register_options() method.

C++: protocols::moves::Mover::register_options() –> void

reinitialize_for_each_job(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be freshly regenerated on

each use.

C++: protocols::moves::Mover::reinitialize_for_each_job() const –> bool

reinitialize_for_new_input(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be regenerated when the input

pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for that one input pose).

C++: protocols::moves::Mover::reinitialize_for_new_input() const –> bool

reset_status(self: pyrosetta.rosetta.protocols.moves.Mover) → None

resets status to SUCCESS, meant to be used before an apply(). The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.

C++: protocols::moves::Mover::reset_status() –> void

set_current_job(self: pyrosetta.rosetta.protocols.moves.Mover, job: protocols::jobdist::BasicJob) → None

C++: protocols::moves::Mover::set_current_job(class std::shared_ptr<const class protocols::jobdist::BasicJob>) –> void

set_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover, new_tag: str) → None

C++: protocols::moves::Mover::set_current_tag(const std::string &) –> void

set_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for poses contained for rms

C++: protocols::moves::Mover::set_input_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for native poses contained for rms —- we should get rid of this method? it is widely used, but a bit unsafe

C++: protocols::moves::Mover::set_native_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_type(self: pyrosetta.rosetta.protocols.moves.Mover, setting: str) → None

Set the ‘type’ string

C++: protocols::moves::Mover::set_type(const std::string &) –> void

show(*args, **kwargs)

Overloaded function.

  1. show(self: pyrosetta.rosetta.protocols.moves.Mover) -> None

  2. show(self: pyrosetta.rosetta.protocols.moves.Mover, output: pyrosetta.rosetta.std.ostream) -> None

Outputs details about the Mover, including current settings.

C++: protocols::moves::Mover::show(std::ostream &) const –> void

src_pose(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, src_pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::src_pose(const class core::pose::Pose &) –> void

start(*args, **kwargs)

Overloaded function.

  1. start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover, res_start: str) -> None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::start(const std::string &) –> void

  1. start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMover) -> str

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMover::start() const –> const std::string &

test_move(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None
: Unit test support function. Apply one move to a given pose.

Allows extra test specific functions to be called before applying

C++: protocols::moves::Mover::test_move(class core::pose::Pose &) –> void

type(*args, **kwargs)

Overloaded function.

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover, type_in: str) -> None

Set the ‘type’ string

C++: protocols::moves::Mover::type(const std::string &) –> void

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover) -> str

Get the set ‘type’ string

C++: protocols::moves::Mover::type() const –> const std::string &

class pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator

Bases: MoverCreator

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator, : pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator) → pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator::operator=(const class protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator &) –> class protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator &

create_mover(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator) → str

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.grafting.simple_movers.InsertPoseIntoPoseMoverCreator, xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::InsertPoseIntoPoseMoverCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover

Bases: Mover

Keep a contiguous region of a pose, delete the rest. Re-detect disulfides

apply(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::KeepRegionMover::apply(class core::pose::Pose &) –> void

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, : pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) → pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover

C++: protocols::grafting::simple_movers::KeepRegionMover::operator=(const class protocols::grafting::simple_movers::KeepRegionMover &) –> class protocols::grafting::simple_movers::KeepRegionMover &

clear_info(self: pyrosetta.rosetta.protocols.moves.Mover) → None

Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file.

clear_info is called by jd2 before calling apply

C++: protocols::moves::Mover::clear_info() –> void

clone(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::KeepRegionMover::clone() const –> class std::shared_ptr<class protocols::moves::Mover>

create(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::create() –> class std::shared_ptr<class protocols::moves::Mover>

end(*args, **kwargs)

Overloaded function.

  1. end(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, res_end: str) -> None

Set the last residue that we will keep

C++: protocols::grafting::simple_movers::KeepRegionMover::end(const std::string &) –> void

  1. end(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, res_end: int) -> None

C++: protocols::grafting::simple_movers::KeepRegionMover::end(unsigned long) –> void

  1. end(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) -> str

C++: protocols::grafting::simple_movers::KeepRegionMover::end() const –> const std::string &

fresh_instance(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::KeepRegionMover::fresh_instance() const –> class std::shared_ptr<class protocols::moves::Mover>

get_additional_output(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

fpd

Mechanism by which a mover may return multiple output poses from a single input pose.

Supported in JD2. Will attempt to grab additional poses until a nullptr is returned.

C++: protocols::moves::Mover::get_additional_output() –> class std::shared_ptr<class core::pose::Pose>

get_current_job(self: pyrosetta.rosetta.protocols.moves.Mover) → protocols::jobdist::BasicJob

C++: protocols::moves::Mover::get_current_job() const –> class std::shared_ptr<const class protocols::jobdist::BasicJob>

get_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover) → str
A tag is a unique identifier used to identify structures produced

by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) sets the tag. This functionality is not intended for use with the 2008 job distributor.

C++: protocols::moves::Mover::get_current_tag() const –> std::string

get_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_input_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_last_move_status(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.MoverStatus

returns status after an apply(). The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say “that run was no good, skip it” then use the protected last_move_status(MoverStatus) to change the value that this function will return.

C++: protocols::moves::Mover::get_last_move_status() const –> enum protocols::moves::MoverStatus

get_name(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) → str

C++: protocols::grafting::simple_movers::KeepRegionMover::get_name() const –> std::string

get_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_native_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_self_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::get_self_ptr() –> class std::shared_ptr<class protocols::moves::Mover>

get_self_weak_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.weak_ptr_protocols_moves_Mover_t

C++: protocols::moves::Mover::get_self_weak_ptr() –> class std::weak_ptr<class protocols::moves::Mover>

get_type(self: pyrosetta.rosetta.protocols.moves.Mover) → str

C++: protocols::moves::Mover::get_type() const –> std::string

info(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.list_std_string_t

non-const accessor

C++: protocols::moves::Mover::info() –> class std::list<std::string, class std::allocator<std::string > > &

last_proposal_density_ratio(self: pyrosetta.rosetta.protocols.moves.Mover) → float

C++: protocols::moves::Mover::last_proposal_density_ratio() –> double

static mover_name() → str

C++: protocols::grafting::simple_movers::KeepRegionMover::mover_name() –> std::string

static name() → str

C++: protocols::moves::Mover::name() –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, tag: pyrosetta.rosetta.utility.tag.Tag, data: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::grafting::simple_movers::KeepRegionMover::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) → None

Provide the citation.

C++: protocols::grafting::simple_movers::KeepRegionMover::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::KeepRegionMover::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

region(*args, **kwargs)

Overloaded function.

  1. region(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, res_start: str, res_end: str) -> None

Set the region of the pose where we keep the residues

C++: protocols::grafting::simple_movers::KeepRegionMover::region(const std::string &, const std::string &) –> void

  1. region(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) -> Tuple[str, str]

C++: protocols::grafting::simple_movers::KeepRegionMover::region() const –> struct std::pair<std::string, std::string >

static register_options() → None

Overload this static method if you access options within the mover.

These options will end up in -help of your application if users of this mover call register_options. Do this recursively! If you use movers within your mover, call their register_options in your register_options() method.

C++: protocols::moves::Mover::register_options() –> void

reinitialize_for_each_job(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be freshly regenerated on

each use.

C++: protocols::moves::Mover::reinitialize_for_each_job() const –> bool

reinitialize_for_new_input(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be regenerated when the input

pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for that one input pose).

C++: protocols::moves::Mover::reinitialize_for_new_input() const –> bool

reset_status(self: pyrosetta.rosetta.protocols.moves.Mover) → None

resets status to SUCCESS, meant to be used before an apply(). The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.

C++: protocols::moves::Mover::reset_status() –> void

set_current_job(self: pyrosetta.rosetta.protocols.moves.Mover, job: protocols::jobdist::BasicJob) → None

C++: protocols::moves::Mover::set_current_job(class std::shared_ptr<const class protocols::jobdist::BasicJob>) –> void

set_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover, new_tag: str) → None

C++: protocols::moves::Mover::set_current_tag(const std::string &) –> void

set_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for poses contained for rms

C++: protocols::moves::Mover::set_input_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for native poses contained for rms —- we should get rid of this method? it is widely used, but a bit unsafe

C++: protocols::moves::Mover::set_native_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_type(self: pyrosetta.rosetta.protocols.moves.Mover, setting: str) → None

Set the ‘type’ string

C++: protocols::moves::Mover::set_type(const std::string &) –> void

show(*args, **kwargs)

Overloaded function.

  1. show(self: pyrosetta.rosetta.protocols.moves.Mover) -> None

  2. show(self: pyrosetta.rosetta.protocols.moves.Mover, output: pyrosetta.rosetta.std.ostream) -> None

Outputs details about the Mover, including current settings.

C++: protocols::moves::Mover::show(std::ostream &) const –> void

start(*args, **kwargs)

Overloaded function.

  1. start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, res_start: str) -> None

Set the first residue that we will keep

C++: protocols::grafting::simple_movers::KeepRegionMover::start(const std::string &) –> void

  1. start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover, res_start: int) -> None

C++: protocols::grafting::simple_movers::KeepRegionMover::start(unsigned long) –> void

  1. start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMover) -> str

C++: protocols::grafting::simple_movers::KeepRegionMover::start() const –> const std::string &

test_move(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None
: Unit test support function. Apply one move to a given pose.

Allows extra test specific functions to be called before applying

C++: protocols::moves::Mover::test_move(class core::pose::Pose &) –> void

type(*args, **kwargs)

Overloaded function.

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover, type_in: str) -> None

Set the ‘type’ string

C++: protocols::moves::Mover::type(const std::string &) –> void

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover) -> str

Get the set ‘type’ string

C++: protocols::moves::Mover::type() const –> const std::string &

class pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator

Bases: MoverCreator

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator, : pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator) → pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator

C++: protocols::grafting::simple_movers::KeepRegionMoverCreator::operator=(const class protocols::grafting::simple_movers::KeepRegionMoverCreator &) –> class protocols::grafting::simple_movers::KeepRegionMoverCreator &

create_mover(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::KeepRegionMoverCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator) → str

C++: protocols::grafting::simple_movers::KeepRegionMoverCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.grafting.simple_movers.KeepRegionMoverCreator, xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::KeepRegionMoverCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover

Bases: Mover

Replace a region of residues with another from a pose piece. Wrapper to grafting utility function

Specify the start residue of the source pose, the residue where replacement will begin,

In addition to the number of residues (span) .

apply(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::apply(class core::pose::Pose &) –> void

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, : pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) → pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover

C++: protocols::grafting::simple_movers::ReplaceRegionMover::operator=(const class protocols::grafting::simple_movers::ReplaceRegionMover &) –> class protocols::grafting::simple_movers::ReplaceRegionMover &

clear_info(self: pyrosetta.rosetta.protocols.moves.Mover) → None

Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file.

clear_info is called by jd2 before calling apply

C++: protocols::moves::Mover::clear_info() –> void

clone(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::ReplaceRegionMover::clone() const –> class std::shared_ptr<class protocols::moves::Mover>

create(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::create() –> class std::shared_ptr<class protocols::moves::Mover>

fresh_instance(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::ReplaceRegionMover::fresh_instance() const –> class std::shared_ptr<class protocols::moves::Mover>

get_additional_output(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

fpd

Mechanism by which a mover may return multiple output poses from a single input pose.

Supported in JD2. Will attempt to grab additional poses until a nullptr is returned.

C++: protocols::moves::Mover::get_additional_output() –> class std::shared_ptr<class core::pose::Pose>

get_current_job(self: pyrosetta.rosetta.protocols.moves.Mover) → protocols::jobdist::BasicJob

C++: protocols::moves::Mover::get_current_job() const –> class std::shared_ptr<const class protocols::jobdist::BasicJob>

get_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover) → str
A tag is a unique identifier used to identify structures produced

by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) sets the tag. This functionality is not intended for use with the 2008 job distributor.

C++: protocols::moves::Mover::get_current_tag() const –> std::string

get_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_input_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_last_move_status(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.MoverStatus

returns status after an apply(). The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say “that run was no good, skip it” then use the protected last_move_status(MoverStatus) to change the value that this function will return.

C++: protocols::moves::Mover::get_last_move_status() const –> enum protocols::moves::MoverStatus

get_name(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) → str

C++: protocols::grafting::simple_movers::ReplaceRegionMover::get_name() const –> std::string

get_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.core.pose.Pose

C++: protocols::moves::Mover::get_native_pose() const –> class std::shared_ptr<const class core::pose::Pose>

get_self_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::moves::Mover::get_self_ptr() –> class std::shared_ptr<class protocols::moves::Mover>

get_self_weak_ptr(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.weak_ptr_protocols_moves_Mover_t

C++: protocols::moves::Mover::get_self_weak_ptr() –> class std::weak_ptr<class protocols::moves::Mover>

get_type(self: pyrosetta.rosetta.protocols.moves.Mover) → str

C++: protocols::moves::Mover::get_type() const –> std::string

info(self: pyrosetta.rosetta.protocols.moves.Mover) → pyrosetta.rosetta.std.list_std_string_t

non-const accessor

C++: protocols::moves::Mover::info() –> class std::list<std::string, class std::allocator<std::string > > &

last_proposal_density_ratio(self: pyrosetta.rosetta.protocols.moves.Mover) → float

C++: protocols::moves::Mover::last_proposal_density_ratio() –> double

static mover_name() → str

C++: protocols::grafting::simple_movers::ReplaceRegionMover::mover_name() –> std::string

static name() → str

C++: protocols::moves::Mover::name() –> std::string

parse_my_tag(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, tag: pyrosetta.rosetta.utility.tag.Tag, data: pyrosetta.rosetta.basic.datacache.DataMap) → None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::parse_my_tag(class std::shared_ptr<const class utility::tag::Tag>, class basic::datacache::DataMap &) –> void

provide_citation_info(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, : pyrosetta.rosetta.basic.citation_manager.CitationCollectionList) → None

Provide the citation.

C++: protocols::grafting::simple_movers::ReplaceRegionMover::provide_citation_info(class basic::citation_manager::CitationCollectionList &) const –> void

static provide_xml_schema(xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) –> void

static register_options() → None

Overload this static method if you access options within the mover.

These options will end up in -help of your application if users of this mover call register_options. Do this recursively! If you use movers within your mover, call their register_options in your register_options() method.

C++: protocols::moves::Mover::register_options() –> void

reinitialize_for_each_job(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be freshly regenerated on

each use.

C++: protocols::moves::Mover::reinitialize_for_each_job() const –> bool

reinitialize_for_new_input(self: pyrosetta.rosetta.protocols.moves.Mover) → bool
Inform the Job Distributor (August ‘08 vintage) whether this object needs to be regenerated when the input

pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for that one input pose).

C++: protocols::moves::Mover::reinitialize_for_new_input() const –> bool

reset_status(self: pyrosetta.rosetta.protocols.moves.Mover) → None

resets status to SUCCESS, meant to be used before an apply(). The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.

C++: protocols::moves::Mover::reset_status() –> void

set_current_job(self: pyrosetta.rosetta.protocols.moves.Mover, job: protocols::jobdist::BasicJob) → None

C++: protocols::moves::Mover::set_current_job(class std::shared_ptr<const class protocols::jobdist::BasicJob>) –> void

set_current_tag(self: pyrosetta.rosetta.protocols.moves.Mover, new_tag: str) → None

C++: protocols::moves::Mover::set_current_tag(const std::string &) –> void

set_input_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for poses contained for rms

C++: protocols::moves::Mover::set_input_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_native_pose(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None

setter for native poses contained for rms —- we should get rid of this method? it is widely used, but a bit unsafe

C++: protocols::moves::Mover::set_native_pose(class std::shared_ptr<const class core::pose::Pose>) –> void

set_type(self: pyrosetta.rosetta.protocols.moves.Mover, setting: str) → None

Set the ‘type’ string

C++: protocols::moves::Mover::set_type(const std::string &) –> void

show(*args, **kwargs)

Overloaded function.

  1. show(self: pyrosetta.rosetta.protocols.moves.Mover) -> None

  2. show(self: pyrosetta.rosetta.protocols.moves.Mover, output: pyrosetta.rosetta.std.ostream) -> None

Outputs details about the Mover, including current settings.

C++: protocols::moves::Mover::show(std::ostream &) const –> void

src_pose(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, from_pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::src_pose(const class core::pose::Pose &) –> void

src_pose_start(*args, **kwargs)

Overloaded function.

  1. src_pose_start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) -> str

C++: protocols::grafting::simple_movers::ReplaceRegionMover::src_pose_start() const –> const std::string &

  1. src_pose_start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, start: str) -> None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::src_pose_start(const std::string &) –> void

target_pose_start(*args, **kwargs)

Overloaded function.

  1. target_pose_start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover) -> str

C++: protocols::grafting::simple_movers::ReplaceRegionMover::target_pose_start() const –> const std::string &

  1. target_pose_start(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMover, start: str) -> None

C++: protocols::grafting::simple_movers::ReplaceRegionMover::target_pose_start(const std::string &) –> void

test_move(self: pyrosetta.rosetta.protocols.moves.Mover, pose: pyrosetta.rosetta.core.pose.Pose) → None
: Unit test support function. Apply one move to a given pose.

Allows extra test specific functions to be called before applying

C++: protocols::moves::Mover::test_move(class core::pose::Pose &) –> void

type(*args, **kwargs)

Overloaded function.

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover, type_in: str) -> None

Set the ‘type’ string

C++: protocols::moves::Mover::type(const std::string &) –> void

  1. type(self: pyrosetta.rosetta.protocols.moves.Mover) -> str

Get the set ‘type’ string

C++: protocols::moves::Mover::type() const –> const std::string &

class pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator

Bases: MoverCreator

assign(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator, : pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator) → pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator

C++: protocols::grafting::simple_movers::ReplaceRegionMoverCreator::operator=(const class protocols::grafting::simple_movers::ReplaceRegionMoverCreator &) –> class protocols::grafting::simple_movers::ReplaceRegionMoverCreator &

create_mover(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::grafting::simple_movers::ReplaceRegionMoverCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator) → str

C++: protocols::grafting::simple_movers::ReplaceRegionMoverCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.grafting.simple_movers.ReplaceRegionMoverCreator, xsd: utility::tag::XMLSchemaDefinition) → None

C++: protocols::grafting::simple_movers::ReplaceRegionMoverCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void