AlignmentCleanerTools

Bindings for protocols::evolution::AlignmentCleanerTools namespace

pyrosetta.rosetta.protocols.evolution.AlignmentCleanerTools.indel_motif(aln_seq: str, motif_radius: int, aln_resi: int, pose_ss_aln: str) → Tuple[str, str]

C++: protocols::evolution::AlignmentCleanerTools::indel_motif(const std::string &, const unsigned long, const unsigned long, const std::string &) –> class std::tuple<std::string, std::string >

pyrosetta.rosetta.protocols.evolution.AlignmentCleanerTools.indel_motif_seq_id(motif1: str, motif2: str) → float

C++: protocols::evolution::AlignmentCleanerTools::indel_motif_seq_id(const std::string &, const std::string &) –> double

pyrosetta.rosetta.protocols.evolution.AlignmentCleanerTools.short_ss_loop_filter(ss: str, min_loop_length: int) → str

C++: protocols::evolution::AlignmentCleanerTools::short_ss_loop_filter(std::string, unsigned long) –> std::string

pyrosetta.rosetta.protocols.evolution.AlignmentCleanerTools.thread_sequence_on_pose(pose: pyrosetta.rosetta.core.pose.Pose, thread_seq: str, scorefxn: pyrosetta.rosetta.core.scoring.ScoreFunction) → None

C++: protocols::evolution::AlignmentCleanerTools::thread_sequence_on_pose(class core::pose::Pose &, const std::string &, class std::shared_ptr<class core::scoring::ScoreFunction>) –> void