geometry

Bindings for protocols::membrane::geometry namespace

class pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef

Bases: pybind11_builtins.pybind11_object

Embedding Setup Helper Class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) -> None
2. __init__(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, center: pyrosetta.rosetta.numeric.xyzVector_double_t, normal: pyrosetta.rosetta.numeric.xyzVector_double_t) -> None
3. __init__(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, arg0: pyrosetta.rosetta.core.pose.Pose, arg1: int, arg2: int) -> None

doc

4. __init__(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, pose: pyrosetta.rosetta.core.pose.Pose, start: int, end: int, pos_z: bool) -> None
5. __init__(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, arg0: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) -> None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, src: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef

Assignment Operator

C++: protocols::membrane::geometry::EmbeddingDef::operator=(const class protocols::membrane::geometry::EmbeddingDef &) –> class protocols::membrane::geometry::EmbeddingDef &

center(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → pyrosetta.rosetta.numeric.xyzVector_double_t

Access center param

C++: protocols::membrane::geometry::EmbeddingDef::center() const –> class numeric::xyzVector<double>

check_range(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → None

Check reasonable range of vectors in embedding object

C++: protocols::membrane::geometry::EmbeddingDef::check_range() const –> void

equals(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, other: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → bool

Equals method

C++: protocols::membrane::geometry::EmbeddingDef::equals(const class protocols::membrane::geometry::EmbeddingDef &) const –> bool

from_span(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, pose: pyrosetta.rosetta.core.pose.Pose, start: int, end: int) → None

From span

C++: protocols::membrane::geometry::EmbeddingDef::from_span(const class core::pose::Pose &, const unsigned long, const unsigned long) –> void

from_span_positive_z(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, pose: pyrosetta.rosetta.core.pose.Pose, start: int, end: int) → None

From span

C++: protocols::membrane::geometry::EmbeddingDef::from_span_positive_z(const class core::pose::Pose &, const unsigned long, const unsigned long) –> void

invert(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → None

Invert normal

C++: protocols::membrane::geometry::EmbeddingDef::invert() –> void

normal(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → pyrosetta.rosetta.numeric.xyzVector_double_t

Access Normal Param

C++: protocols::membrane::geometry::EmbeddingDef::normal() const –> class numeric::xyzVector<double>

set_center(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, center: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

Set Center Param

C++: protocols::membrane::geometry::EmbeddingDef::set_center(class numeric::xyzVector<double>) –> void

set_normal(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, normal: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

Set Normal Param

C++: protocols::membrane::geometry::EmbeddingDef::set_normal(class numeric::xyzVector<double>) –> void

show(*args, **kwargs)

Overloaded function.

1. show(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) -> None
2. show(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, output: pyrosetta.rosetta.std.ostream) -> None

Standard Rosetta Show Method for Debugging

C++: protocols::membrane::geometry::EmbeddingDef::show(class std::basic_ostream<char> &) const –> void

translate_by(self: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef, translation: pyrosetta.rosetta.protocols.membrane.geometry.EmbeddingDef) → None

Translate by center and normal

C++: protocols::membrane::geometry::EmbeddingDef::translate_by(const class protocols::membrane::geometry::EmbeddingDef &) –> void