rotamer_recovery

Bindings for protocols::rotamer_recovery namespace

class pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer

Bases: pybind11_builtins.pybind11_object

The comparison functionality for the rotamer recovery test

Besides implementing the interface given in the base class RRComparer each RRComparer should have an entry in the conevience RotamerRecovery constructor so its use can be indicated by name.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, : pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer) → pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer

C++: protocols::rotamer_recovery::RRComparer::operator=(const class protocols::rotamer_recovery::RRComparer &) –> class protocols::rotamer_recovery::RRComparer &

get_name(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer) → str

C++: protocols::rotamer_recovery::RRComparer::get_name() const –> std::string

get_parameters(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer) → str

C++: protocols::rotamer_recovery::RRComparer::get_parameters() const –> std::string

measure_rotamer_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, pose1: pyrosetta.rosetta.core.pose.Pose, pose2: pyrosetta.rosetta.core.pose.Pose, res1: pyrosetta.rosetta.core.conformation.Residue, res2: pyrosetta.rosetta.core.conformation.Residue, score: float, recovered: bool) → bool

C++: protocols::rotamer_recovery::RRComparer::measure_rotamer_recovery(const class core::pose::Pose &, const class core::pose::Pose &, const class core::conformation::Residue &, const class core::conformation::Residue &, double &, bool &) –> bool

parse_attributes_from_tag(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, tag: pyrosetta.rosetta.utility.tag.Tag) → None

C++: protocols::rotamer_recovery::RRComparer::parse_attributes_from_tag(class std::shared_ptr<const class utility::tag::Tag>) –> void

set_absolute_threshold(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, absolute_threshold: float) → None

C++: protocols::rotamer_recovery::RRComparer::set_absolute_threshold(const double) –> void

set_recovery_threshold(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, recovery_threshold: float) → None

C++: protocols::rotamer_recovery::RRComparer::set_recovery_threshold(const double) –> void

class pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator

Bases: pybind11_builtins.pybind11_object

The Creator class is responsible for creating a particular mover class.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator) -> None
2. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator, arg0: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator) -> None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

append_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RRComparerCreator::append_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator, : pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator

C++: protocols::rotamer_recovery::RRComparerCreator::operator=(const class protocols::rotamer_recovery::RRComparerCreator &) –> class protocols::rotamer_recovery::RRComparerCreator &

create_comparer(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer

C++: protocols::rotamer_recovery::RRComparerCreator::create_comparer() const –> class std::shared_ptr<class protocols::rotamer_recovery::RRComparer>

type_name(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparerCreator) → str

C++: protocols::rotamer_recovery::RRComparerCreator::type_name() const –> std::string

class pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol

Bases: pybind11_builtins.pybind11_object

The protocol to run to compute the rotamer recovery the rotamer recovery test

Besides implementing the interface given in the base class RRProtocol each RRProtocol should have an entry in the convenience RotamerRecovery constructor so its use can be indicated by name.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol, : pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol) → pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol

C++: protocols::rotamer_recovery::RRProtocol::operator=(const class protocols::rotamer_recovery::RRProtocol &) –> class protocols::rotamer_recovery::RRProtocol &

get_name(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol) → str

C++: protocols::rotamer_recovery::RRProtocol::get_name() const –> std::string

get_parameters(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol) → str

C++: protocols::rotamer_recovery::RRProtocol::get_parameters() const –> std::string

run(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol, comparer: pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer, reporter: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, pose: pyrosetta.rosetta.core.pose.Pose, score_function: pyrosetta.rosetta.core.scoring.ScoreFunction, packer_task: pyrosetta.rosetta.core.pack.task.PackerTask) → None

C++: protocols::rotamer_recovery::RRProtocol::run(class std::shared_ptr<class protocols::rotamer_recovery::RRComparer>, class std::shared_ptr<class protocols::rotamer_recovery::RRReporter>, const class core::pose::Pose &, const class core::scoring::ScoreFunction &, const class core::pack::task::PackerTask &) –> void

class pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator

Bases: pybind11_builtins.pybind11_object

The Creator class is responsible for creating a particular mover class.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator) -> None
2. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator, arg0: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator) -> None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

append_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RRProtocolCreator::append_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator, : pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator

C++: protocols::rotamer_recovery::RRProtocolCreator::operator=(const class protocols::rotamer_recovery::RRProtocolCreator &) –> class protocols::rotamer_recovery::RRProtocolCreator &

create_protocol(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol

C++: protocols::rotamer_recovery::RRProtocolCreator::create_protocol() const –> class std::shared_ptr<class protocols::rotamer_recovery::RRProtocol>

type_name(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocolCreator) → str

C++: protocols::rotamer_recovery::RRProtocolCreator::type_name() const –> std::string

class pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter

Bases: pybind11_builtins.pybind11_object

The reporting functionality for the rotamer recovery test

Besides implementing the interface given in the base class RRReporter each RRReporter should have an entry in the conevience RotamerRecovery constructor so its use can be indicated by name.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, : pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter) → pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter

C++: protocols::rotamer_recovery::RRReporter::operator=(const class protocols::rotamer_recovery::RRReporter &) –> class protocols::rotamer_recovery::RRReporter &

recovery_rate(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter) → float

C++: protocols::rotamer_recovery::RRReporter::recovery_rate() const –> double

report_rotamer_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, pose1: pyrosetta.rosetta.core.pose.Pose, pose2: pyrosetta.rosetta.core.pose.Pose, res1: pyrosetta.rosetta.core.conformation.Residue, res2: pyrosetta.rosetta.core.conformation.Residue, score: float, recovered: bool) → None

C++: protocols::rotamer_recovery::RRReporter::report_rotamer_recovery(const class core::pose::Pose &, const class core::pose::Pose &, const class core::conformation::Residue &, const class core::conformation::Residue &, double, bool) –> void

reset_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter) → None

C++: protocols::rotamer_recovery::RRReporter::reset_recovery() –> void

set_comparer_info(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, comparer_name: str, comparer_params: str) → None

C++: protocols::rotamer_recovery::RRReporter::set_comparer_info(const class std::basic_string<char> &, const class std::basic_string<char> &) –> void

set_protocol_info(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, protocol_name: str, protocol_params: str) → None

C++: protocols::rotamer_recovery::RRReporter::set_protocol_info(const class std::basic_string<char> &, const class std::basic_string<char> &) –> void

show(*args, **kwargs)

Overloaded function.

1. show(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter, out: pyrosetta.rosetta.std.ostream) -> None

C++: protocols::rotamer_recovery::RRReporter::show(class std::basic_ostream<char> &) const –> void

2. show(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter) -> None

C++: protocols::rotamer_recovery::RRReporter::show() const –> void

class pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator

Bases: pybind11_builtins.pybind11_object

The Creator class is responsible for creating a particular mover class.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator) -> None
2. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator, arg0: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator) -> None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

append_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RRReporterCreator::append_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator, : pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator

C++: protocols::rotamer_recovery::RRReporterCreator::operator=(const class protocols::rotamer_recovery::RRReporterCreator &) –> class protocols::rotamer_recovery::RRReporterCreator &

create_reporter(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator) → pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter

C++: protocols::rotamer_recovery::RRReporterCreator::create_reporter() const –> class std::shared_ptr<class protocols::rotamer_recovery::RRReporter>

type_name(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterCreator) → str

C++: protocols::rotamer_recovery::RRReporterCreator::type_name() const –> std::string

class pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman

Bases: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter

The reporting functionality for the rotamer recovery test in a human readable format.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

1. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) -> None
2. __init__(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, arg0: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) -> None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, : pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) → pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman

C++: protocols::rotamer_recovery::RRReporterHuman::operator=(const class protocols::rotamer_recovery::RRReporterHuman &) –> class protocols::rotamer_recovery::RRReporterHuman &

recovery_rate(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) → float

C++: protocols::rotamer_recovery::RRReporterHuman::recovery_rate() const –> double

report_rotamer_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, pose1: pyrosetta.rosetta.core.pose.Pose, pose2: pyrosetta.rosetta.core.pose.Pose, res1: pyrosetta.rosetta.core.conformation.Residue, res2: pyrosetta.rosetta.core.conformation.Residue, score: float, recovered: bool) → None

C++: protocols::rotamer_recovery::RRReporterHuman::report_rotamer_recovery(const class core::pose::Pose &, const class core::pose::Pose &, const class core::conformation::Residue &, const class core::conformation::Residue &, double, bool) –> void

reset_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) → None

C++: protocols::rotamer_recovery::RRReporterHuman::reset_recovery() –> void

set_comparer_info(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, comparer_name: str, comparer_params: str) → None

C++: protocols::rotamer_recovery::RRReporterHuman::set_comparer_info(const class std::basic_string<char> &, const class std::basic_string<char> &) –> void

set_protocol_info(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, protocol_name: str, protocol_params: str) → None

C++: protocols::rotamer_recovery::RRReporterHuman::set_protocol_info(const class std::basic_string<char> &, const class std::basic_string<char> &) –> void

show(*args, **kwargs)

Overloaded function.

1. show(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman, out: pyrosetta.rosetta.std.ostream) -> None

C++: protocols::rotamer_recovery::RRReporterHuman::show(class std::basic_ostream<char> &) const –> void

2. show(self: pyrosetta.rosetta.protocols.rotamer_recovery.RRReporterHuman) -> None

C++: protocols::rotamer_recovery::RRReporterHuman::show() const –> void

class pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory

Bases: pyrosetta.rosetta.utility.SingletonBase_protocols_rotamer_recovery_RotamerRecoveryFactory_t

Create Rotamer_Recovery Reporters

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__

Initialize self. See help(type(self)) for accurate signature.

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

append_comparer_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::append_comparer_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

append_protocol_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::append_protocol_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

append_reporter_attributes(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, attlist: pyrosetta.rosetta.std.list_utility_tag_XMLSchemaAttribute_t) → None

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::append_reporter_attributes(class std::list<class utility::tag::XMLSchemaAttribute, class std::allocator<class utility::tag::XMLSchemaAttribute> > &) const –> void

get_instance() → protocols::rotamer_recovery::RotamerRecoveryFactory

C++: utility::SingletonBase<protocols::rotamer_recovery::RotamerRecoveryFactory>::get_instance() –> class protocols::rotamer_recovery::RotamerRecoveryFactory *

get_rotamer_recovery(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, protocol: str, comparer: str, reporter: str) → pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecovery

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::get_rotamer_recovery(const class std::basic_string<char> &, const class std::basic_string<char> &, const class std::basic_string<char> &) –> class std::shared_ptr<class protocols::rotamer_recovery::RotamerRecovery>

get_rotamer_recovery_comparer(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, type_name: str) → pyrosetta.rosetta.protocols.rotamer_recovery.RRComparer

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::get_rotamer_recovery_comparer(const class std::basic_string<char> &) –> class std::shared_ptr<class protocols::rotamer_recovery::RRComparer>

get_rotamer_recovery_protocol(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, type_name: str) → pyrosetta.rosetta.protocols.rotamer_recovery.RRProtocol

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::get_rotamer_recovery_protocol(const class std::basic_string<char> &) –> class std::shared_ptr<class protocols::rotamer_recovery::RRProtocol>

get_rotamer_recovery_reporter(self: pyrosetta.rosetta.protocols.rotamer_recovery.RotamerRecoveryFactory, type_name: str) → pyrosetta.rosetta.protocols.rotamer_recovery.RRReporter

C++: protocols::rotamer_recovery::RotamerRecoveryFactory::get_rotamer_recovery_reporter(const class std::basic_string<char> &) –> class std::shared_ptr<class protocols::rotamer_recovery::RRReporter>