refine

Bindings for protocols::loops::loop_mover::refine namespace

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the LoopMover_Refine_BackrubCreator class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator::operator=(const class protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator &) –> class protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator) → str

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_BackrubCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_BackrubCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the LoopMover_Refine_CCDCreator class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator::operator=(const class protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator &) –> class protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator) → str

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_CCDCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_CCDCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the LoopMover_Perturb_KICCreator class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator::operator=(const class protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator &) –> class protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator) → str

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopMover_Refine_KICCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::LoopMover_Refine_KICCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the LoopRefineInnerCycleContainer class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator

C++: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator::operator=(const class protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator &) –> class protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator) → str

C++: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleContainerCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainerCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleFactory

Bases: pyrosetta.rosetta.utility.SingletonBase_protocols_loops_loop_mover_refine_LoopRefineInnerCycleFactory_t

Create LoopMover Reporters

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__

Initialize self. See help(type(self)) for accurate signature.

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

create_inner_cycle(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleFactory, type_name: pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycleName, loop_mover: pyrosetta.rosetta.std.weak_ptr_protocols_loops_loop_mover_refine_LoopMover_Refine_CCD_t, mc: pyrosetta.rosetta.protocols.moves.MonteCarlo, scorefxn: pyrosetta.rosetta.core.scoring.ScoreFunction, tf: pyrosetta.rosetta.core.pack.task.TaskFactory) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.LoopRefineInnerCycle

Create a LoopRefineInnerCycle giving it a pointer to the data it needs to function

C++: protocols::loops::loop_mover::refine::LoopRefineInnerCycleFactory::create_inner_cycle(enum protocols::loops::loop_mover::refine::LoopRefineInnerCycleName, class std::weak_ptr<class protocols::loops::loop_mover::refine::LoopMover_Refine_CCD>, class std::shared_ptr<class protocols::moves::MonteCarlo>, class std::shared_ptr<class core::scoring::ScoreFunction>, class std::shared_ptr<class core::pack::task::TaskFactory>) const –> class std::shared_ptr<class protocols::loops::loop_mover::refine::LoopRefineInnerCycle>

get_instance() → protocols::loops::loop_mover::refine::LoopRefineInnerCycleFactory

C++: utility::SingletonBase<protocols::loops::loop_mover::refine::LoopRefineInnerCycleFactory>::get_instance() –> class protocols::loops::loop_mover::refine::LoopRefineInnerCycleFactory *

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the RepackTrial class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator

C++: protocols::loops::loop_mover::refine::RepackTrialCreator::operator=(const class protocols::loops::loop_mover::refine::RepackTrialCreator &) –> class protocols::loops::loop_mover::refine::RepackTrialCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::RepackTrialCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator) → str

C++: protocols::loops::loop_mover::refine::RepackTrialCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.RepackTrialCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::RepackTrialCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the ShearMinCCDTrial class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator

C++: protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator::operator=(const class protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator &) –> class protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator) → str

C++: protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.ShearMinCCDTrialCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::ShearMinCCDTrialCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void

class pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator

Bases: pyrosetta.rosetta.protocols.moves.MoverCreator

creator for the SmallMinCCDTrial class

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator, : pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator) → pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator

C++: protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator::operator=(const class protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator &) –> class protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator &

create_mover(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator) → pyrosetta.rosetta.protocols.moves.Mover

C++: protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator::create_mover() const –> class std::shared_ptr<class protocols::moves::Mover>

keyname(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator) → str

C++: protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator::keyname() const –> std::string

provide_xml_schema(self: pyrosetta.rosetta.protocols.loops.loop_mover.refine.SmallMinCCDTrialCreator, xsd: pyrosetta.rosetta.utility.tag.XMLSchemaDefinition) → None

C++: protocols::loops::loop_mover::refine::SmallMinCCDTrialCreator::provide_xml_schema(class utility::tag::XMLSchemaDefinition &) const –> void