nonlocal

Bindings for protocols::frag_picker::nonlocal namespace

pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalFrags_main() → None

C++: protocols::frag_picker::nonlocal::NonlocalFrags_main() –> void

class pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair

Bases: pybind11_builtins.pybind11_object

represents a nonlocal fragment pair.

NonlocalPair contains query start positions for each fragment of pair i and j, and their corresponding fragment candidate

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair, query_pos_i: int, query_pos_j: int, candidate_i: Tuple[pyrosetta.rosetta.protocols.frag_picker.FragmentCandidate, pyrosetta.rosetta.protocols.frag_picker.scores.FragmentScoreMap], candidate_j: Tuple[pyrosetta.rosetta.protocols.frag_picker.FragmentCandidate, pyrosetta.rosetta.protocols.frag_picker.scores.FragmentScoreMap], candidate_i_rank: int, candidate_j_rank: int, contacts: pyrosetta.rosetta.utility.vector1_std_shared_ptr_protocols_frag_picker_Contact_t) → None

__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair, : pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair

C++: protocols::frag_picker::nonlocal::NonlocalPair::operator=(const class protocols::frag_picker::nonlocal::NonlocalPair &) –> class protocols::frag_picker::nonlocal::NonlocalPair &

get_candidate_i(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → Tuple[pyrosetta.rosetta.protocols.frag_picker.FragmentCandidate, pyrosetta.rosetta.protocols.frag_picker.scores.FragmentScoreMap]

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_candidate_i() –> struct std::pair<class std::shared_ptr<class protocols::frag_picker::FragmentCandidate>, class std::shared_ptr<class protocols::frag_picker::scores::FragmentScoreMap> >

get_candidate_i_rank(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → int

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_candidate_i_rank() –> unsigned long

get_candidate_j(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → Tuple[pyrosetta.rosetta.protocols.frag_picker.FragmentCandidate, pyrosetta.rosetta.protocols.frag_picker.scores.FragmentScoreMap]

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_candidate_j() –> struct std::pair<class std::shared_ptr<class protocols::frag_picker::FragmentCandidate>, class std::shared_ptr<class protocols::frag_picker::scores::FragmentScoreMap> >

get_candidate_j_rank(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → int

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_candidate_j_rank() –> unsigned long

get_contacts(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_protocols_frag_picker_Contact_t

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_contacts() –> class utility::vector1<class std::shared_ptr<class protocols::frag_picker::Contact>, class std::allocator<class std::shared_ptr<class protocols::frag_picker::Contact> > > &

get_query_pos_i(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → int

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_query_pos_i() –> unsigned long

get_query_pos_j(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair) → int

C++: protocols::frag_picker::nonlocal::NonlocalPair::get_query_pos_j() –> unsigned long

print(self: pyrosetta.rosetta.protocols.frag_picker.nonlocal.NonlocalPair, out: pyrosetta.rosetta.std.ostream) → None

C++: protocols::frag_picker::nonlocal::NonlocalPair::print(class std::basic_ostream<char> &) –> void