Index – Q

q (pyrosetta.rosetta.core.chemical.rings.CPParameter attribute) q() (pyrosetta.rosetta.core.scoring.facts.FACTSRsdTypeInfo method) Q() (pyrosetta.rosetta.core.scoring.ResidualDipolarCoupling method) q1 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) q2 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) q3 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) q4 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) q5 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) q6 (pyrosetta.rosetta.protocols.frag_picker.scores.GunnTuple property) (pyrosetta.rosetta.protocols.simple_moves.GunnTuple property) QCPKernel_double_t (class in pyrosetta.rosetta.numeric.alignment) qeps (pyrosetta.rosetta.core.scoring.elec.ElecGroup property) qfx (pyrosetta.rosetta.core.scoring.APBSResult property) qfy (pyrosetta.rosetta.core.scoring.APBSResult property) qfz (pyrosetta.rosetta.core.scoring.APBSResult property) qq_constrain_antibody() (in module pyrosetta.rosetta.protocols.antibody) qq_heavy_residue() (pyrosetta.rosetta.protocols.antibody.AntibodyInfo method) qq_light_residue() (pyrosetta.rosetta.protocols.antibody.AntibodyInfo method) qsarCreator (class in pyrosetta.rosetta.protocols.qsar) qsarMap (class in pyrosetta.rosetta.protocols.qsar) qsarMover (class in pyrosetta.rosetta.protocols.qsar) qsarOptData (class in pyrosetta.rosetta.protocols.qsar) qsarOptFunc (class in pyrosetta.rosetta.protocols.qsar) qsarPoint (class in pyrosetta.rosetta.protocols.qsar) quadratic_chainbreak() (in module pyrosetta.rosetta.protocols.forge.methods) quadratic_deriv_interpolation() (pyrosetta.rosetta.core.optimization.ArmijoLineMinimization method) (pyrosetta.rosetta.core.optimization.BrentLineMinimization method) (pyrosetta.rosetta.core.optimization.LineMinimizationAlgorithm method) (pyrosetta.rosetta.core.optimization.StrongWolfeLineMinimization method) quadratic_interpolation() (pyrosetta.rosetta.core.optimization.ArmijoLineMinimization method) (pyrosetta.rosetta.core.optimization.BrentLineMinimization method) (pyrosetta.rosetta.core.optimization.LineMinimizationAlgorithm method) (pyrosetta.rosetta.core.optimization.StrongWolfeLineMinimization method) quadrupole() (pyrosetta.rosetta.core.scoring.MultipoleElecResidueInfo method) (pyrosetta.rosetta.core.scoring.MultipoleParameter method) quality() (pyrosetta.rosetta.protocols.frag_picker.PhiPsiTalosIO method) quality_class() (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak method) (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak3D method) (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak4D method) quality_class_str() (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak method) (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak3D method) (pyrosetta.rosetta.protocols.noesy_assign.CrossPeak4D method) Quat (class in pyrosetta.rosetta.protocols.simple_filters) quat() (pyrosetta.rosetta.protocols.ligand_docking.ga_ligand_dock.LigandConformer method) quat2R() (in module pyrosetta.rosetta.numeric) (in module pyrosetta.rosetta.protocols.simple_filters) QuatDBMetadata (class in pyrosetta.rosetta.basic.sampling.orientations) Quaternion (class in pyrosetta.rosetta.basic.sampling.orientations)

quaternion() (pyrosetta.rosetta.basic.sampling.orientations.QuaternionGrid method) Quaternion_double_t (class in pyrosetta.rosetta.numeric) quaternion_tolerance() (pyrosetta.rosetta.numeric.NumericTraits_double_t static method) (pyrosetta.rosetta.numeric.NumericTraits_float_t static method) (pyrosetta.rosetta.numeric.NumericTraits_long_double_t static method) QuaternionGrid (class in pyrosetta.rosetta.basic.sampling.orientations) QuaternionGridManager (class in pyrosetta.rosetta.basic.sampling.orientations) QuatSet (class in pyrosetta.rosetta.basic.sampling.orientations) quench() (pyrosetta.rosetta.core.pack.annealer.DebuggingAnnealer method) (pyrosetta.rosetta.core.pack.annealer.FASTERAnnealer method) (pyrosetta.rosetta.core.pack.annealer.FixbbCoupledRotamerSimAnnealer method) (pyrosetta.rosetta.core.pack.annealer.FixbbLinkingRotamerSimAnnealer method) (pyrosetta.rosetta.core.pack.annealer.FixbbPwatSimAnnealer method) (pyrosetta.rosetta.core.pack.annealer.FixbbSimAnnealer method) (pyrosetta.rosetta.core.pack.annealer.MultiCoolAnnealer method) (pyrosetta.rosetta.core.pack.annealer.RotamerAssigningAnnealer method) (pyrosetta.rosetta.core.pack.annealer.SequenceSymmetricAnnealer method) (pyrosetta.rosetta.core.pack.annealer.SimAnnealerBase method) (pyrosetta.rosetta.core.pack.annealer.SmartFixbbSimAnnealer method) (pyrosetta.rosetta.protocols.flexpack.annealer.FlexbbSimAnnealer method) QuenchDirection (class in pyrosetta.rosetta.protocols.carbohydrates) query() (pyrosetta.rosetta.cppdb.backend.statement method) (pyrosetta.rosetta.cppdb.statement method) query_index() (pyrosetta.rosetta.protocols.comparative_modeling.ExtraThreadingMover method) (pyrosetta.rosetta.protocols.comparative_modeling.ThreadingMover method) query_length() (pyrosetta.rosetta.protocols.frag_picker.BoundedCollector_CompareTotalScore method) (pyrosetta.rosetta.protocols.frag_picker.BoundedCollector_protocols_frag_picker_CompareTotalScore_t method) (pyrosetta.rosetta.protocols.frag_picker.CandidatesCollector method) (pyrosetta.rosetta.protocols.frag_picker.GrabAllCollector method) (pyrosetta.rosetta.protocols.frag_picker.quota.ABEGO_SS_Pool method) (pyrosetta.rosetta.protocols.frag_picker.quota.QuotaCollector method) (pyrosetta.rosetta.protocols.frag_picker.quota.QuotaPool method) (pyrosetta.rosetta.protocols.frag_picker.quota.SecondaryStructurePool method) query_name() (pyrosetta.rosetta.protocols.task_operations.AlignedThreadOperation method) query_region() (pyrosetta.rosetta.protocols.simple_filters.DomainInterfaceFilter method) query_region_string() (pyrosetta.rosetta.protocols.simple_filters.DomainInterfaceFilter method) query_results (pyrosetta.rosetta.protocols.indexed_structure_store.DirectSegmentLookupResult property) (pyrosetta.rosetta.protocols.indexed_structure_store.SegmentSequenceProfileResult property) query_selector() (pyrosetta.rosetta.protocols.fold_from_loops.filters.RmsdFromResidueSelectorFilter method) (pyrosetta.rosetta.protocols.fold_from_loops.movers.AlignByResidueSelectorMover method) query_sequence() (pyrosetta.rosetta.protocols.abinitio.Template method) query_stats (pyrosetta.rosetta.protocols.indexed_structure_store.DirectSegmentLookup property) (pyrosetta.rosetta.protocols.indexed_structure_store.SegmentSequenceProfile property) queue_message() (pyrosetta.rosetta.utility.SimulateMPIData method) quick() (pyrosetta.rosetta.core.simple_metrics.metrics.ShapeSimilarityMetric method) (pyrosetta.rosetta.protocols.simple_filters.ContactMolecularSurfaceFilter method) (pyrosetta.rosetta.protocols.simple_filters.ShapeComplementarityFilter method) quick_and_dirty_heavy_atom_is_unsat() (pyrosetta.rosetta.protocols.hbnet.HBNet method) (pyrosetta.rosetta.protocols.hbnet.HBNetStapleInterface method) quick_and_dirty_network_has_heavy_atom_unsat() (pyrosetta.rosetta.protocols.hbnet.HBNet method) (pyrosetta.rosetta.protocols.hbnet.HBNetStapleInterface method) quick_ring_detection() (in module pyrosetta.rosetta.core.chemical) QuickRelaxPartnersSeparately (class in pyrosetta.rosetta.protocols.docking.membrane) QuickRelaxPartnersSeparatelyCreator (class in pyrosetta.rosetta.protocols.docking.membrane) QuickRepacker (class in pyrosetta.rosetta.protocols.pack_daemon) quota_protocol() (pyrosetta.rosetta.protocols.frag_picker.FragmentPicker method) quota_score() (pyrosetta.rosetta.protocols.frag_picker.quota.ABEGO_SS_Pool method) (pyrosetta.rosetta.protocols.frag_picker.quota.QuotaPool method) (pyrosetta.rosetta.protocols.frag_picker.quota.SecondaryStructurePool method) QuotaCollector (class in pyrosetta.rosetta.protocols.frag_picker.quota) QuotaConfig (class in pyrosetta.rosetta.protocols.frag_picker.quota) QuotaDebug (class in pyrosetta.rosetta.protocols.frag_picker) QuotaDebug.sentry (class in pyrosetta.rosetta.protocols.frag_picker) QuotaPool (class in pyrosetta.rosetta.protocols.frag_picker.quota) QuotaSelector (class in pyrosetta.rosetta.protocols.frag_picker.quota) quoted_split() (in module pyrosetta.rosetta.utility)