alignment

Bindings for numeric::alignment namespace

class pyrosetta.rosetta.numeric.alignment.QCPKernel_double_t

Bases: pybind11_object

static calc_rmsd_Theobald_method(A: float, E0: float, number_of_atoms: int, rot_matrix: float) → float

C++: numeric::alignment::QCPKernel<double>::calc_rmsd_Theobald_method(double *, double, unsigned long, double *) –> double

pyrosetta.rosetta.numeric.alignment.coordinate_array_broadcast_rmsd(arg0: ndarray::Array[float, ndim=3, contiguous=1], arg1: ndarray::Array[float, ndim=3, contiguous=1], arg2: ndarray::Array[float, ndim=2, contiguous=0]) → None

pyrosetta.rosetta.numeric.alignment.coordinate_array_rmsd(arg0: ndarray::Array[float, ndim=3, contiguous=1], arg1: ndarray::Array[float, ndim=3, contiguous=1], arg2: ndarray::Array[float, ndim=1, contiguous=0]) → None

pyrosetta.rosetta.numeric.alignment.coordinate_array_superimpose(arg0: ndarray::Array[float, ndim=3, contiguous=1], arg1: ndarray::Array[float, ndim=3, contiguous=1], arg2: ndarray::Array[float, ndim=3, contiguous=1], arg3: ndarray::Array[float, ndim=1, contiguous=0]) → None

pyrosetta.rosetta.numeric.alignment.indexed_coordinate_array_broadcast_rmsd(*args, **kwargs)

Overloaded function.

1. indexed_coordinate_array_broadcast_rmsd(arg0: int, arg1: ndarray::Array[float, ndim=2, contiguous=1], arg2: ndarray::Array[int, ndim=1, contiguous=0], arg3: ndarray::Array[float, ndim=2, contiguous=1], arg4: ndarray::Array[int, ndim=1, contiguous=0], arg5: ndarray::Array[float, ndim=2, contiguous=0]) -> None

2. indexed_coordinate_array_broadcast_rmsd(arg0: int, arg1: ndarray::Array[float, ndim=2, contiguous=1], arg2: ndarray::Array[int, ndim=1, contiguous=0], arg3: ndarray::Array[float, ndim=2, contiguous=1], arg4: ndarray::Array[int, ndim=1, contiguous=0], arg5: ndarray::Array[float, ndim=2, contiguous=0]) -> None