full_model_info

Bindings for core::pose::full_model_info namespace

class pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

Bases: pyrosetta.rosetta.basic.datacache.CacheableData

Keep track of all information related to how a subpose ‘fits in’ to global modeling scheme.

See FullModelParameters for more information on the global modeling scheme, including
full_sequence, etc.
__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, full_sequence: str, cutpoint_open_in_full_model: pyrosetta.rosetta.utility.vector1_unsigned_long, res_numbers_in_pose: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None
  2. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, full_model_parameters: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) -> None
  3. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) -> None
  4. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, arg0: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> None
__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

add_other_pose(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::FullModelInfo::add_other_pose(class std::shared_ptr<class core::pose::Pose>) –> void

add_submotif_info(*args, **kwargs)

Overloaded function.

  1. add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str) -> None
  2. add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str, seed: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class std::basic_string<char> &, const bool &) –> void

  1. add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > >) –> void

  1. add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_op: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>) –> void

alignment_anchor_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::alignment_anchor_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

assign(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, : pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

C++: core::pose::full_model_info::FullModelInfo::operator=(const class core::pose::full_model_info::FullModelInfo &) –> class core::pose::full_model_info::FullModelInfo &

calc_rms_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::calc_rms_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

chains_in_full_model(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::chains_in_full_model() const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

clear_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None

C++: core::pose::full_model_info::FullModelInfo::clear_other_pose_list() –> void

clear_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None

C++: core::pose::full_model_info::FullModelInfo::clear_res_list() –> void

clone(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.basic.datacache.CacheableData

C++: core::pose::full_model_info::FullModelInfo::clone() const –> class std::shared_ptr<class basic::datacache::CacheableData>

clone_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

C++: core::pose::full_model_info::FullModelInfo::clone_info() const –> class std::shared_ptr<class core::pose::full_model_info::FullModelInfo>

conventional_chains(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_char

C++: core::pose::full_model_info::FullModelInfo::conventional_chains() const –> const class utility::vector1<char, class std::allocator<char> > &

conventional_numbering(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_int

C++: core::pose::full_model_info::FullModelInfo::conventional_numbering() const –> const class utility::vector1<int, class std::allocator<int> > &

cutpoint_open_in_full_model(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::cutpoint_open_in_full_model() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

delete_submotif_info(*args, **kwargs)

Overloaded function.

  1. delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str) -> None
  2. delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str, seed: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class std::basic_string<char> &, const bool &) –> void

  1. delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > >) –> void

  1. delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_op: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>) –> void

dock_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::dock_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

extra_minimize_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::extra_minimize_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

find_index_in_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → int

C++: core::pose::full_model_info::FullModelInfo::find_index_in_other_pose_list(const class core::pose::Pose &) const –> unsigned long

fiveprime_cap(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t

C++: core::pose::full_model_info::FullModelInfo::fiveprime_cap() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

fixed_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::fixed_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters

C++: core::pose::full_model_info::FullModelInfo::full_model_parameters() const –> class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>

full_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → str

C++: core::pose::full_model_info::FullModelInfo::full_sequence() const –> const std::string &

full_to_sub(*args, **kwargs)

Overloaded function.

  1. full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_in_full_model_numbering: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::full_to_sub(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

  1. full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_in_full_model_numbering: int) -> int

C++: core::pose::full_model_info::FullModelInfo::full_to_sub(const unsigned long) const –> unsigned long

  1. full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> pyrosetta.rosetta.std.map_unsigned_long_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::full_to_sub() const –> class std::map<unsigned long, unsigned long, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, unsigned long> > >

get_idx_for_other_pose(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → int

C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose(const class core::pose::Pose &) const –> unsigned long

get_idx_for_other_pose_with_residue(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, input_res: int) → int

C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose_with_residue(const unsigned long) const –> unsigned long

get_idx_for_other_pose_with_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, input_res: pyrosetta.rosetta.utility.vector1_unsigned_long) → int

C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose_with_residues(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> unsigned long

get_self_ptr(self: pyrosetta.rosetta.basic.datacache.CacheableData) → pyrosetta.rosetta.basic.datacache.CacheableData

C++: basic::datacache::CacheableData::get_self_ptr() –> class std::shared_ptr<class basic::datacache::CacheableData>

get_self_weak_ptr(self: pyrosetta.rosetta.basic.datacache.CacheableData) → pyrosetta.rosetta.std.weak_ptr_basic_datacache_CacheableData_t

C++: basic::datacache::CacheableData::get_self_weak_ptr() –> class std::weak_ptr<class basic::datacache::CacheableData>

in_a_submotif(*args, **kwargs)

Overloaded function.

  1. in_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
  2. in_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::in_a_submotif(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

in_a_submotif_seed(*args, **kwargs)

Overloaded function.

  1. in_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
  2. in_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::in_a_submotif_seed(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

input_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::input_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

is_a_submotif(*args, **kwargs)

Overloaded function.

  1. is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif() const –> bool

  1. is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
  2. is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

is_a_submotif_seed(*args, **kwargs)

Overloaded function.

  1. is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif_seed() const –> bool

  1. is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
  2. is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif_seed(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

jump_pairs(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t

C++: core::pose::full_model_info::FullModelInfo::jump_pairs() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

jump_res_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::jump_res_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t

C++: core::pose::full_model_info::FullModelInfo::other_pose_list() const –> const class utility::vector1<class std::shared_ptr<class core::pose::Pose>, class std::allocator<class std::shared_ptr<class core::pose::Pose> > > &

preferred_root_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::preferred_root_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

remove_other_pose_at_idx(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, idx: int) → None

C++: core::pose::full_model_info::FullModelInfo::remove_other_pose_at_idx(const unsigned long) –> void

res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::res_list() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_anti_chi_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_anti_chi_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_block_stack_above_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_block_stack_above_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_block_stack_below_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_block_stack_below_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_bulge_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_bulge_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_sample_sugar_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_sample_sugar_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_syn_chi_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_syn_chi_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_terminal_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::rna_terminal_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

sample_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::sample_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

set_full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, setting: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → None

C++: core::pose::full_model_info::FullModelInfo::set_full_model_parameters(class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>) –> void

set_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, setting: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t) → None

C++: core::pose::full_model_info::FullModelInfo::set_other_pose_list(const class utility::vector1<class std::shared_ptr<class core::pose::Pose>, class std::allocator<class std::shared_ptr<class core::pose::Pose> > > &) –> void

set_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) → None

C++: core::pose::full_model_info::FullModelInfo::set_res_list(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

show_submotif_info_list(*args, **kwargs)

Overloaded function.

  1. show_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> None
  2. show_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, for_all_poses: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::show_submotif_info_list(const bool &) const –> void

size(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → int

C++: core::pose::full_model_info::FullModelInfo::size() const –> unsigned long

sub_to_full(*args, **kwargs)

Overloaded function.

  1. sub_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::sub_to_full(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

  1. sub_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res: int) -> int

C++: core::pose::full_model_info::FullModelInfo::sub_to_full(const unsigned long &) const –> unsigned long

submotif_info(*args, **kwargs)

Overloaded function.

  1. submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo
  2. submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo

C++: core::pose::full_model_info::FullModelInfo::submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

submotif_info_containing_residues(*args, **kwargs)

Overloaded function.

  1. submotif_info_containing_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo
  2. submotif_info_containing_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo

C++: core::pose::full_model_info::FullModelInfo::submotif_info_containing_residues(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t

C++: core::pose::full_model_info::FullModelInfo::submotif_info_list() const –> class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > > &

update_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None

C++: core::pose::full_model_info::FullModelInfo::update_submotif_info_list() –> void

working_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::working_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

class pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo

Bases: pybind11_builtins.pybind11_object

Keep track of information about a submotif added to a pose.

__delattr__

Implement delattr(self, name).

__dir__() → list

default dir() implementation

__eq__

Return self==value.

__format__()

default object formatter

__ge__

Return self>=value.

__getattribute__

Return getattr(self, name).

__gt__

Return self>value.

__hash__

Return hash(self).

__init__(*args, **kwargs)

Overloaded function.

  1. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> None
  2. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, arg0: pyrosetta.rosetta.utility.vector1_unsigned_long, arg1: str) -> None

doc

  1. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str, seed: bool) -> None
  2. __init__(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, arg0: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> None
__init_subclass__()

This method is called when a class is subclassed.

The default implementation does nothing. It may be overridden to extend subclasses.

__le__

Return self<=value.

__lt__

Return self<value.

__ne__

Return self!=value.

__new__()

Create and return a new object. See help(type) for accurate signature.

__reduce__()

helper for pickle

__reduce_ex__()

helper for pickle

__repr__

Return repr(self).

__setattr__

Implement setattr(self, name, value).

__sizeof__() → int

size of object in memory, in bytes

__str__

Return str(self).

__subclasshook__()

Abstract classes can override this to customize issubclass().

This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).

assign(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, : pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) → pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo

C++: core::pose::full_model_info::SubMotifInfo::operator=(const class core::pose::full_model_info::SubMotifInfo &) –> class core::pose::full_model_info::SubMotifInfo &

clone(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) → pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo

C++: core::pose::full_model_info::SubMotifInfo::clone() const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

res_list(*args, **kwargs)

Overloaded function.

  1. res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::SubMotifInfo::res_list() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

  1. res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, index: int) -> int

C++: core::pose::full_model_info::SubMotifInfo::res_list(const unsigned long &) const –> const unsigned long &

  1. res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None

C++: core::pose::full_model_info::SubMotifInfo::res_list(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

seed(*args, **kwargs)

Overloaded function.

  1. seed(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> bool

C++: core::pose::full_model_info::SubMotifInfo::seed() const –> const bool &

  1. seed(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, seed: bool) -> None

C++: core::pose::full_model_info::SubMotifInfo::seed(const bool &) –> void

sorted_res_list(*args, **kwargs)

Overloaded function.

  1. sorted_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::SubMotifInfo::sorted_res_list() const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

  1. sorted_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, index: int) -> int

C++: core::pose::full_model_info::SubMotifInfo::sorted_res_list(const unsigned long &) –> unsigned long

tag(*args, **kwargs)

Overloaded function.

  1. tag(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> str

C++: core::pose::full_model_info::SubMotifInfo::tag() const –> const std::string &

  1. tag(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, tag: str) -> None

C++: core::pose::full_model_info::SubMotifInfo::tag(const class std::basic_string<char> &) –> void

pyrosetta.rosetta.core.pose.full_model_info.append_virtual_residue_to_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::append_virtual_residue_to_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.check_all_residues_sampled(pose: pyrosetta.rosetta.core.pose.Pose) → bool

C++: core::pose::full_model_info::check_all_residues_sampled(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.check_full_model_info_OK(pose: pyrosetta.rosetta.core.pose.Pose) → bool

C++: core::pose::full_model_info::check_full_model_info_OK(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.check_sample_sugar_in_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose, i: int) → bool

C++: core::pose::full_model_info::check_sample_sugar_in_full_model_info(const class core::pose::Pose &, const unsigned long) –> bool

pyrosetta.rosetta.core.pose.full_model_info.const_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

C++: core::pose::full_model_info::const_full_model_info(const class core::pose::Pose &) –> const class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.figure_out_chain_numbers_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::figure_out_chain_numbers_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_chain_numbers_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::figure_out_chain_numbers_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_conventional_chains_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_char

C++: core::pose::full_model_info::figure_out_conventional_chains_from_full_model_info(const class core::pose::Pose &) –> class utility::vector1<char, class std::allocator<char> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_dock_domain_map_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::figure_out_dock_domain_map_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_pose_domain_map(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::figure_out_pose_domain_map(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_pose_domain_map_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::figure_out_pose_domain_map_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.full_model_info_defined(pose: pyrosetta.rosetta.core.pose.Pose) → bool

C++: core::pose::full_model_info::full_model_info_defined(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.full_model_parameter_type_from_string(name: str) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType

C++: core::pose::full_model_info::full_model_parameter_type_from_string(const class std::basic_string<char> &) –> enum core::pose::full_model_info::FullModelParameterType

pyrosetta.rosetta.core.pose.full_model_info.full_model_size(pose: pyrosetta.rosetta.core.pose.Pose) → int

C++: core::pose::full_model_info::full_model_size(class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.full_to_sub(*args, **kwargs)

Overloaded function.

  1. full_to_sub(i: int, pose: pyrosetta.rosetta.core.pose.Pose) -> int

C++: core::pose::full_model_info::full_to_sub(const unsigned long, const class core::pose::Pose &) –> unsigned long

  1. full_to_sub(res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, pose: pyrosetta.rosetta.core.pose.Pose) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::full_to_sub(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_chain_connections(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t

C++: core::pose::full_model_info::get_chain_connections(const class core::pose::Pose &) –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

pyrosetta.rosetta.core.pose.full_model_info.get_chain_for_full_model_resnum(resnum: int, pose: pyrosetta.rosetta.core.pose.Pose) → int

C++: core::pose::full_model_info::get_chain_for_full_model_resnum(const unsigned long &, const class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_chain_for_resnum(resnum: int, pose: pyrosetta.rosetta.core.pose.Pose) → int

C++: core::pose::full_model_info::get_chain_for_resnum(const unsigned long &, const class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_chains_from_cutpoint_open(cutpoint_open: pyrosetta.rosetta.utility.vector1_unsigned_long, nres: int) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_chains_from_cutpoint_open(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const unsigned long) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_chains_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_char

C++: core::pose::full_model_info::get_chains_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<char, class std::allocator<char> >

pyrosetta.rosetta.core.pose.full_model_info.get_chains_full(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_chains_full(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_connection_domains(chain_connections: pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t, nchains: int) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_connection_domains(const class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > > &, const unsigned long) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_cutpoint_open_from_chains(chains: pyrosetta.rosetta.utility.vector1_unsigned_long) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_cutpoint_open_from_chains(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_fixed_domain_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_fixed_domain_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_input_domain_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_input_domain_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_move_elements_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t

C++: core::pose::full_model_info::get_move_elements_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > >

pyrosetta.rosetta.core.pose.full_model_info.get_move_elements_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t

C++: core::pose::full_model_info::get_move_elements_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > >

pyrosetta.rosetta.core.pose.full_model_info.get_moving_res_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_moving_res_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_moving_res_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_moving_res_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_number_missing_residues_and_connections(*args, **kwargs)

Overloaded function.

  1. get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The pose is passed by nonconst reference, so that the full_model_info can be setup, if needed.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(class core::pose::Pose &) –> unsigned long

  1. get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, missing_residues: pyrosetta.rosetta.utility.vector1_char) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The missing_residues vector is passed by nonconst reference, so its values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<char, class std::allocator<char> > &) –> unsigned long

  1. get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, loop_suites: pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The loop_suites vector is passed by nonconst reference, so its values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > &) –> unsigned long

  1. get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, missing_residues: pyrosetta.rosetta.utility.vector1_char, loop_suites: pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The missing_res and loop_suites vectors are passed by nonconst reference, so their values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<char, class std::allocator<char> > &, class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_res_list_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_res_list_from_full_model_info(class core::pose::Pose &) –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_res_list_from_full_model_info_const(const class core::pose::Pose &) –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

pyrosetta.rosetta.core.pose.full_model_info.get_res_num_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_int

C++: core::pose::full_model_info::get_res_num_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<int, class std::allocator<int> >

pyrosetta.rosetta.core.pose.full_model_info.get_residue(seqpos_in_full_model: int, pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.conformation.Residue

C++: core::pose::full_model_info::get_residue(const unsigned long, const class core::pose::Pose &) –> const class core::conformation::Residue &

pyrosetta.rosetta.core.pose.full_model_info.get_sample_res_for_pose(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::get_sample_res_for_pose(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_segids_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_std_string

C++: core::pose::full_model_info::get_segids_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<std::string, class std::allocator<std::string > >

pyrosetta.rosetta.core.pose.full_model_info.initialize_parameters(full_model_parameters: core::pose::full_model_info::FullModelParameters) → None

C++: core::pose::full_model_info::initialize_parameters(class core::pose::full_model_info::FullModelParameters &) –> void

pyrosetta.rosetta.core.pose.full_model_info.make_sure_full_model_info_is_setup(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

C++: core::pose::full_model_info::make_sure_full_model_info_is_setup(class core::pose::Pose &) –> const class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.nonconst_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo

C++: core::pose::full_model_info::nonconst_full_model_info(class core::pose::Pose &) –> class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_append(*args, **kwargs)

Overloaded function.

  1. reorder_full_model_info_after_append(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int) -> None
  2. reorder_full_model_info_after_append(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int, offset: int) -> None

C++: core::pose::full_model_info::reorder_full_model_info_after_append(class core::pose::Pose &, const unsigned long, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_delete(pose: pyrosetta.rosetta.core.pose.Pose, res_to_delete: int) → None
Keep track of RNA centroid information inside the pose.

C++: core::pose::full_model_info::reorder_full_model_info_after_delete(class core::pose::Pose &, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_prepend(*args, **kwargs)

Overloaded function.

  1. reorder_full_model_info_after_prepend(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int) -> None
  2. reorder_full_model_info_after_prepend(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int, offset: int) -> None

C++: core::pose::full_model_info::reorder_full_model_info_after_prepend(class core::pose::Pose &, const unsigned long, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.set_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose, full_model_info: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None

C++: core::pose::full_model_info::set_full_model_info(class core::pose::Pose &, class std::shared_ptr<class core::pose::full_model_info::FullModelInfo> &) –> void

pyrosetta.rosetta.core.pose.full_model_info.sub_to_full(*args, **kwargs)

Overloaded function.

  1. sub_to_full(i: int, pose: pyrosetta.rosetta.core.pose.Pose) -> int

C++: core::pose::full_model_info::sub_to_full(const unsigned long, const class core::pose::Pose &) –> unsigned long

  1. sub_to_full(res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, pose: pyrosetta.rosetta.core.pose.Pose) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::sub_to_full(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.to_string(type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) → str

C++: core::pose::full_model_info::to_string(const enum core::pose::full_model_info::FullModelParameterType &) –> std::string

pyrosetta.rosetta.core.pose.full_model_info.update_constraint_set_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::update_constraint_set_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_disulfides_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::update_disulfides_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_full_model_info_from_pose(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::update_full_model_info_from_pose(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_pdb_info_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::update_pdb_info_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_pose_objects_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None

C++: core::pose::full_model_info::update_pose_objects_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_res_list_in_full_model_info_and_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose, res_list_new: pyrosetta.rosetta.utility.vector1_unsigned_long) → None

C++: core::pose::full_model_info::update_res_list_in_full_model_info_and_pdb_info(class core::pose::Pose &, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void