rna¶
Bindings for core::io::rna namespace
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class
pyrosetta.rosetta.core.io.rna.RNA_DataReader¶ Bases:
pybind11_builtins.pybind11_object-
__delattr__¶ Implement delattr(self, name).
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__dir__() → list¶ default dir() implementation
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__eq__¶ Return self==value.
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__format__()¶ default object formatter
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__ge__¶ Return self>=value.
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__getattribute__¶ Return getattr(self, name).
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__gt__¶ Return self>value.
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__hash__¶ Return hash(self).
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__init__(self: pyrosetta.rosetta.core.io.rna.RNA_DataReader, rna_data_file: str) → None¶
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__init_subclass__()¶ This method is called when a class is subclassed.
The default implementation does nothing. It may be overridden to extend subclasses.
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__le__¶ Return self<=value.
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__lt__¶ Return self<value.
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__ne__¶ Return self!=value.
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__new__()¶ Create and return a new object. See help(type) for accurate signature.
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__reduce__()¶ helper for pickle
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__reduce_ex__()¶ helper for pickle
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__repr__¶ Return repr(self).
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__setattr__¶ Implement setattr(self, name, value).
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__sizeof__() → int¶ size of object in memory, in bytes
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__str__¶ Return str(self).
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__subclasshook__()¶ Abstract classes can override this to customize issubclass().
This is invoked early on by abc.ABCMeta.__subclasscheck__(). It should return True, False or NotImplemented. If it returns NotImplemented, the normal algorithm is used. Otherwise, it overrides the normal algorithm (and the outcome is cached).
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assign(self: pyrosetta.rosetta.core.io.rna.RNA_DataReader, : pyrosetta.rosetta.core.io.rna.RNA_DataReader) → pyrosetta.rosetta.core.io.rna.RNA_DataReader¶ C++: core::io::rna::RNA_DataReader::operator=(const class core::io::rna::RNA_DataReader &) –> class core::io::rna::RNA_DataReader &
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fill_rna_data_info(self: pyrosetta.rosetta.core.io.rna.RNA_DataReader, pose: pyrosetta.rosetta.core.pose.Pose) → None¶ C++: core::io::rna::RNA_DataReader::fill_rna_data_info(class core::pose::Pose &) –> void
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has_reactivities(self: pyrosetta.rosetta.core.io.rna.RNA_DataReader) → bool¶ C++: core::io::rna::RNA_DataReader::has_reactivities() –> bool
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initialize(self: pyrosetta.rosetta.core.io.rna.RNA_DataReader, rna_data_file: str) → None¶ C++: core::io::rna::RNA_DataReader::initialize(const class std::basic_string<char> &) –> void
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pyrosetta.rosetta.core.io.rna.get_rna_data_info(*args, **kwargs)¶ Overloaded function.
- get_rna_data_info(pose: pyrosetta.rosetta.core.pose.Pose, rna_data_file: str) -> pyrosetta.rosetta.core.pose.rna.RNA_DataInfo
- get_rna_data_info(pose: pyrosetta.rosetta.core.pose.Pose, rna_data_file: str, scorefxn: pyrosetta.rosetta.core.scoring.ScoreFunction) -> pyrosetta.rosetta.core.pose.rna.RNA_DataInfo
C++: core::io::rna::get_rna_data_info(class core::pose::Pose &, const class std::basic_string<char> &, class std::shared_ptr<class core::scoring::ScoreFunction>) –> const class core::pose::rna::RNA_DataInfo &
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pyrosetta.rosetta.core.io.rna.get_tag(annotations: pyrosetta.rosetta.utility.vector1_std_pair_std_string_std_string_t, tag: str) → str¶ C++: core::io::rna::get_tag(const class utility::vector1<struct std::pair<class std::basic_string<char>, class std::basic_string<char> >, class std::allocator<struct std::pair<class std::basic_string<char>, class std::basic_string<char> > > > &, const class std::basic_string<char> &) –> std::string
C++: core::io::rna::get_tags(const class utility::vector1<class utility::vector1<struct std::pair<class std::basic_string<char>, class std::basic_string<char> >, class std::allocator<struct std::pair<class std::basic_string<char>, class std::basic_string<char> > > >, class std::allocator<class utility::vector1<struct std::pair<class std::basic_string<char>, class std::basic_string<char> >, class std::allocator<struct std::pair<class std::basic_string<char>, class std::basic_string<char> > > > > > &, const class std::basic_string<char> &) –> class utility::vector1<std::string, class std::allocator<std::string > >