Package rosetta :: Package basic :: Package options :: Module _basic_options_
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Module _basic_options_

Functions [hide private]
 
get_boolean_option(...)
get_boolean_option( (str)id) -> bool : basic/options/PyRosettaFunctions.hh:38
 
get_boolean_vector_option(...)
get_boolean_vector_option( (str)id) -> vector1_bool : basic/options/PyRosettaFunctions.hh:51
 
get_file_option(...)
get_file_option( (str)id) -> str : basic/options/PyRosettaFunctions.hh:42
 
get_file_vector_option(...)
get_file_vector_option( (str)id) -> vector1_string : basic/options/PyRosettaFunctions.hh:55
 
get_integer_option(...)
get_integer_option( (str)id) -> int : basic/options/PyRosettaFunctions.hh:39
 
get_integer_vector_option(...)
get_integer_vector_option( (str)id) -> vector1_int : basic/options/PyRosettaFunctions.hh:52
 
get_real_option(...)
get_real_option( (str)id) -> float : basic/options/PyRosettaFunctions.hh:40
 
get_real_vector_option(...)
get_real_vector_option( (str)id) -> vector1_Real : basic/options/PyRosettaFunctions.hh:53
 
get_string_option(...)
get_string_option( (str)id) -> str : basic/options/PyRosettaFunctions.hh:41
 
get_string_vector_option(...)
get_string_vector_option( (str)id) -> vector1_string : basic/options/PyRosettaFunctions.hh:54
object :
initialize()
Initialize the options
 
int2afteroption(...)
int2afteroption( (object)key, (int)opt_default, (int)inum, (int)opt_default2, (int)inum2) -> None : basic/options/after_opts.hh:161
 
intafteroption(...)
intafteroption( (object)key, (int)opt_default, (int)inum) -> None : basic/options/after_opts.hh:141
 
optional_positive_intafteroption(...)
optional_positive_intafteroption( (object)key, (int)opt_default, (int)inum) -> None : basic/options/after_opts.hh:177
object :
process()
Process the specified options
 
real2afteroption(...)
real2afteroption( (object)key, (float)default1, (float)rnum1, (float)default2, (float)rnum2) -> None : basic/options/after_opts.hh:88
 
real3afteroption(...)
real3afteroption( (object)key, (float)default1, (float)rnum1, (float)default2, (float)rnum2, (float)default3, (float)rnum3) -> None : basic/options/after_opts.hh:112
 
realafteroption(...)
realafteroption( (object)key, (float)opt_default, (float)rnum) -> None : basic/options/after_opts.hh:68
 
set_boolean_option(...)
set_boolean_option( (str)id, (bool)) -> None : basic/options/PyRosettaFunctions.hh:44
 
set_boolean_vector_option(...)
set_boolean_vector_option( (str)id, (vector1_bool)) -> None : basic/options/PyRosettaFunctions.hh:57
 
set_file_option(...)
set_file_option( (str)id, (str)) -> None : basic/options/PyRosettaFunctions.hh:48
 
set_file_vector_option(...)
set_file_vector_option( (str)id, (vector1_string)) -> None : basic/options/PyRosettaFunctions.hh:61
 
set_integer_option(...)
set_integer_option( (str)id, (int)) -> None : basic/options/PyRosettaFunctions.hh:45
 
set_integer_vector_option(...)
set_integer_vector_option( (str)id, (vector1_int)) -> None : basic/options/PyRosettaFunctions.hh:58
 
set_real_option(...)
set_real_option( (str)id, (float)) -> None : basic/options/PyRosettaFunctions.hh:46
 
set_real_vector_option(...)
set_real_vector_option( (str)id, (vector1_Real)) -> None : basic/options/PyRosettaFunctions.hh:59
 
set_string_option(...)
set_string_option( (str)id, (str)) -> None : basic/options/PyRosettaFunctions.hh:47
 
set_string_vector_option(...)
set_string_vector_option( (str)id, (vector1_string)) -> None : basic/options/PyRosettaFunctions.hh:60
str :
start_file()
convenience functions
vector1_string :
start_files()
basic/options/util.hh:160
 
stringafteroption(...)
stringafteroption( (object)key, (str)opt_default, (str)cval) -> None : basic/options/after_opts.hh:222
 
truefalseoption(...)
truefalseoption( (object)key) -> bool : basic/options/after_opts.hh:39
Variables [hide private]
  __package__ = None
Function Details [hide private]

get_boolean_option(...)

 

get_boolean_option( (str)id) -> bool :
    basic/options/PyRosettaFunctions.hh:38

    C++ signature :
        bool get_boolean_option(std::string)

get_boolean_vector_option(...)

 

get_boolean_vector_option( (str)id) -> vector1_bool :
    basic/options/PyRosettaFunctions.hh:51

    C++ signature :
        utility::vector1<bool, std::allocator<bool> > get_boolean_vector_option(std::string)

get_file_option(...)

 

get_file_option( (str)id) -> str :
    basic/options/PyRosettaFunctions.hh:42

    C++ signature :
        std::string get_file_option(std::string)

get_file_vector_option(...)

 

get_file_vector_option( (str)id) -> vector1_string :
    basic/options/PyRosettaFunctions.hh:55

    C++ signature :
        utility::vector1<std::string, std::allocator<std::string> > get_file_vector_option(std::string)

get_integer_option(...)

 

get_integer_option( (str)id) -> int :
    basic/options/PyRosettaFunctions.hh:39

    C++ signature :
        int get_integer_option(std::string)

get_integer_vector_option(...)

 

get_integer_vector_option( (str)id) -> vector1_int :
    basic/options/PyRosettaFunctions.hh:52

    C++ signature :
        utility::vector1<int, std::allocator<int> > get_integer_vector_option(std::string)

get_real_option(...)

 

get_real_option( (str)id) -> float :
    basic/options/PyRosettaFunctions.hh:40

    C++ signature :
        double get_real_option(std::string)

get_real_vector_option(...)

 

get_real_vector_option( (str)id) -> vector1_Real :
    basic/options/PyRosettaFunctions.hh:53

    C++ signature :
        utility::vector1<double, std::allocator<double> > get_real_vector_option(std::string)

get_string_option(...)

 

get_string_option( (str)id) -> str :
    basic/options/PyRosettaFunctions.hh:41

    C++ signature :
        std::string get_string_option(std::string)

get_string_vector_option(...)

 

get_string_vector_option( (str)id) -> vector1_string :
    basic/options/PyRosettaFunctions.hh:54

    C++ signature :
        utility::vector1<std::string, std::allocator<std::string> > get_string_vector_option(std::string)

initialize()

 
    Initialize the options
    

    C++ signature :
        utility::options::OptionCollection {lvalue} initialize()

Returns: object :

int2afteroption(...)

 

int2afteroption( (object)key, (int)opt_default, (int)inum, (int)opt_default2, (int)inum2) -> None :
    basic/options/after_opts.hh:161

    C++ signature :
        void int2afteroption(utility::options::OptionKey,int,int {lvalue},int,int {lvalue})

int2afteroption( (str)str, (int)opt_default, (int)inum, (int)opt_default2, (int)inum2) -> None :
    basic/options/after_opts.hh:151

    C++ signature :
        void int2afteroption(std::string,int,int {lvalue},int,int {lvalue})

intafteroption(...)

 

intafteroption( (object)key, (int)opt_default, (int)inum) -> None :
    basic/options/after_opts.hh:141

    C++ signature :
        void intafteroption(utility::options::OptionKey,int,int {lvalue})

intafteroption( (str)str, (int)opt_default, (int)inum) -> None :
    basic/options/after_opts.hh:133

    C++ signature :
        void intafteroption(std::string,int,int {lvalue})

intafteroption( (str)str, (int)opt_default) -> int :
    basic/options/after_opts.hh:125

    C++ signature :
        int intafteroption(std::string,int)

intafteroption( (str)str) -> int :
    basic/options/after_opts.hh:118

    C++ signature :
        int intafteroption(std::string)

optional_positive_intafteroption(...)

 

optional_positive_intafteroption( (object)key, (int)opt_default, (int)inum) -> None :
    basic/options/after_opts.hh:177

    C++ signature :
        void optional_positive_intafteroption(utility::options::OptionKey,int,int {lvalue})

optional_positive_intafteroption( (str)str, (int)opt_default, (int)inum) -> None :
    basic/options/after_opts.hh:169

    C++ signature :
        void optional_positive_intafteroption(std::string,int,int {lvalue})

process()

 
    Process the specified options
    

    C++ signature :
        utility::options::OptionCollection {lvalue} process()

Returns: object :

real2afteroption(...)

 

real2afteroption( (object)key, (float)default1, (float)rnum1, (float)default2, (float)rnum2) -> None :
    basic/options/after_opts.hh:88

    C++ signature :
        void real2afteroption(utility::options::OptionKey,double,double {lvalue},double,double {lvalue})

real2afteroption( (str)str, (float)default1, (float)rnum1, (float)default2, (float)rnum2) -> None :
    basic/options/after_opts.hh:78

    C++ signature :
        void real2afteroption(std::string,double,double {lvalue},double,double {lvalue})

real3afteroption(...)

 

real3afteroption( (object)key, (float)default1, (float)rnum1, (float)default2, (float)rnum2, (float)default3, (float)rnum3) -> None :
    basic/options/after_opts.hh:112

    C++ signature :
        void real3afteroption(utility::options::OptionKey,double,double {lvalue},double,double {lvalue},double,double {lvalue})

real3afteroption( (str)str, (float)default1, (float)rnum1, (float)default2, (float)rnum2, (float)default3, (float)rnum3) -> None :
    basic/options/after_opts.hh:100

    C++ signature :
        void real3afteroption(std::string,double,double {lvalue},double,double {lvalue},double,double {lvalue})

realafteroption(...)

 

realafteroption( (object)key, (float)opt_default, (float)rnum) -> None :
    basic/options/after_opts.hh:68

    C++ signature :
        void realafteroption(utility::options::OptionKey,double,double {lvalue})

realafteroption( (str)str, (float)opt_default, (float)rnum) -> None :
    basic/options/after_opts.hh:60

    C++ signature :
        void realafteroption(std::string,double,double {lvalue})

realafteroption( (str)str, (float)opt_default) -> float :
    basic/options/after_opts.hh:52

    C++ signature :
        double realafteroption(std::string,double)

realafteroption( (str)str) -> float :
    basic/options/after_opts.hh:45

    C++ signature :
        double realafteroption(std::string)

set_boolean_option(...)

 

set_boolean_option( (str)id, (bool)) -> None :
    basic/options/PyRosettaFunctions.hh:44

    C++ signature :
        void set_boolean_option(std::string,bool)

set_boolean_vector_option(...)

 

set_boolean_vector_option( (str)id, (vector1_bool)) -> None :
    basic/options/PyRosettaFunctions.hh:57

    C++ signature :
        void set_boolean_vector_option(std::string,utility::vector1<bool, std::allocator<bool> >)

set_file_option(...)

 

set_file_option( (str)id, (str)) -> None :
    basic/options/PyRosettaFunctions.hh:48

    C++ signature :
        void set_file_option(std::string,std::string)

set_file_vector_option(...)

 

set_file_vector_option( (str)id, (vector1_string)) -> None :
    basic/options/PyRosettaFunctions.hh:61

    C++ signature :
        void set_file_vector_option(std::string,utility::vector1<std::string, std::allocator<std::string> >)

set_integer_option(...)

 

set_integer_option( (str)id, (int)) -> None :
    basic/options/PyRosettaFunctions.hh:45

    C++ signature :
        void set_integer_option(std::string,int)

set_integer_vector_option(...)

 

set_integer_vector_option( (str)id, (vector1_int)) -> None :
    basic/options/PyRosettaFunctions.hh:58

    C++ signature :
        void set_integer_vector_option(std::string,utility::vector1<int, std::allocator<int> >)

set_real_option(...)

 

set_real_option( (str)id, (float)) -> None :
    basic/options/PyRosettaFunctions.hh:46

    C++ signature :
        void set_real_option(std::string,double)

set_real_vector_option(...)

 

set_real_vector_option( (str)id, (vector1_Real)) -> None :
    basic/options/PyRosettaFunctions.hh:59

    C++ signature :
        void set_real_vector_option(std::string,utility::vector1<double, std::allocator<double> >)

set_string_option(...)

 

set_string_option( (str)id, (str)) -> None :
    basic/options/PyRosettaFunctions.hh:47

    C++ signature :
        void set_string_option(std::string,std::string)

set_string_vector_option(...)

 

set_string_vector_option( (str)id, (vector1_string)) -> None :
    basic/options/PyRosettaFunctions.hh:60

    C++ signature :
        void set_string_vector_option(std::string,utility::vector1<std::string, std::allocator<std::string> >)

start_file()

 
    convenience functions
    

    C++ signature :
        std::string start_file()

Returns: str :

start_files()

 
    basic/options/util.hh:160

    C++ signature :
        utility::vector1<std::string, std::allocator<std::string> > start_files()

Returns: vector1_string :

stringafteroption(...)

 

stringafteroption( (object)key, (str)opt_default, (str)cval) -> None :
    basic/options/after_opts.hh:222

    C++ signature :
        void stringafteroption(utility::options::OptionKey,char,char {lvalue})

stringafteroption( (str)str, (str)opt_default, (str)cval) -> None :
    basic/options/after_opts.hh:214

    C++ signature :
        void stringafteroption(std::string,char,char {lvalue})

stringafteroption( (object)key, (str)opt_default, (str)cval) -> None :
    basic/options/after_opts.hh:206

    C++ signature :
        void stringafteroption(utility::options::OptionKey,std::string,std::string {lvalue})

stringafteroption( (str)str, (str)opt_default, (str)cval) -> None :
    basic/options/after_opts.hh:198

    C++ signature :
        void stringafteroption(std::string,std::string,std::string {lvalue})

stringafteroption( (str)str, (str)opt_default) -> str :
    basic/options/after_opts.hh:190

    C++ signature :
        std::string stringafteroption(std::string,std::string)

stringafteroption( (str)str) -> str :
    basic/options/after_opts.hh:183

    C++ signature :
        std::string stringafteroption(std::string)

truefalseoption(...)

 

truefalseoption( (object)key) -> bool :
    basic/options/after_opts.hh:39

    C++ signature :
        bool truefalseoption(utility::options::OptionKey)

truefalseoption( (str)str) -> bool :
    basic/options/after_opts.hh:35

    C++ signature :
        bool truefalseoption(std::string)