evaluator

Bindings for core::scoring::loop_graph::evaluator namespace

class pyrosetta.rosetta.core.scoring.loop_graph.evaluator.GaussianChainFuncPotentialEvaluator

Bases: LoopClosePotentialEvaluator

current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_atom() const –> class core::id::AtomID

current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_xyz() const –> class numeric::xyzVector<double>

current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_atom() const –> class core::id::AtomID

current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_xyz() const –> class numeric::xyzVector<double>

get_f1_f2(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.GaussianChainFuncPotentialEvaluator, f1: pyrosetta.rosetta.numeric.xyzVector_double_t, f2: pyrosetta.rosetta.numeric.xyzVector_double_t, takeoff: bool) → None

C++: core::scoring::loop_graph::evaluator::GaussianChainFuncPotentialEvaluator::get_f1_f2(class numeric::xyzVector<double> &, class numeric::xyzVector<double> &, const bool) const –> void

involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → bool

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::involves_current_pose() const –> bool

loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_closure_energy() const –> double

loop_fixed_cost(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_fixed_cost() const –> const double &

set_current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_atom(const class core::id::AtomID &) –> void

set_current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_xyz(const class numeric::xyzVector<double> &) –> void

set_current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_atom(const class core::id::AtomID &) –> void

set_current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_xyz(const class numeric::xyzVector<double> &) –> void

set_involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: bool) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_involves_current_pose(const bool &) –> void

set_loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: float) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_loop_closure_energy(const double &) –> void

class pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator

Bases: pybind11_object

current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_atom() const –> class core::id::AtomID

current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_xyz() const –> class numeric::xyzVector<double>

current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_atom() const –> class core::id::AtomID

current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_xyz() const –> class numeric::xyzVector<double>

get_f1_f2(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, f1: pyrosetta.rosetta.numeric.xyzVector_double_t, f2: pyrosetta.rosetta.numeric.xyzVector_double_t, takeoff: bool) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::get_f1_f2(class numeric::xyzVector<double> &, class numeric::xyzVector<double> &, const bool) const –> void

involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → bool

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::involves_current_pose() const –> bool

loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_closure_energy() const –> double

loop_fixed_cost(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_fixed_cost() const –> const double &

set_current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_atom(const class core::id::AtomID &) –> void

set_current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_xyz(const class numeric::xyzVector<double> &) –> void

set_current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_atom(const class core::id::AtomID &) –> void

set_current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_xyz(const class numeric::xyzVector<double> &) –> void

set_involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: bool) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_involves_current_pose(const bool &) –> void

set_loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: float) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_loop_closure_energy(const double &) –> void

class pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotential

Bases: pybind11_object

enforce_continuity_at_pi(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotential) → bool

C++: core::scoring::loop_graph::evaluator::SixDTransRotPotential::enforce_continuity_at_pi() const –> bool

evaluate(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotential, j: pyrosetta.rosetta.core.kinematics.Jump) → float

C++: core::scoring::loop_graph::evaluator::SixDTransRotPotential::evaluate(const class core::kinematics::Jump &) const –> double

get_derivative(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotential, j: pyrosetta.rosetta.core.kinematics.Jump) → Tuple[pyrosetta.rosetta.numeric.xyzVector_double_t, pyrosetta.rosetta.numeric.xyzVector_double_t]

C++: core::scoring::loop_graph::evaluator::SixDTransRotPotential::get_derivative(const class core::kinematics::Jump &) const –> struct std::pair<class numeric::xyzVector<double>, class numeric::xyzVector<double> >

set_enforce_continuity_at_pi(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotential, setting: bool) → None

C++: core::scoring::loop_graph::evaluator::SixDTransRotPotential::set_enforce_continuity_at_pi(const bool &) –> void

class pyrosetta.rosetta.core.scoring.loop_graph.evaluator.SixDTransRotPotentialEvaluator

Bases: LoopClosePotentialEvaluator

current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_atom() const –> class core::id::AtomID

current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_landing_xyz() const –> class numeric::xyzVector<double>

current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.core.id.AtomID

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_atom() const –> class core::id::AtomID

current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → pyrosetta.rosetta.numeric.xyzVector_double_t

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::current_pose_takeoff_xyz() const –> class numeric::xyzVector<double>

get_f1_f2(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, f1: pyrosetta.rosetta.numeric.xyzVector_double_t, f2: pyrosetta.rosetta.numeric.xyzVector_double_t, takeoff: bool) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::get_f1_f2(class numeric::xyzVector<double> &, class numeric::xyzVector<double> &, const bool) const –> void

involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → bool

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::involves_current_pose() const –> bool

loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_closure_energy() const –> double

loop_fixed_cost(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator) → float

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::loop_fixed_cost() const –> const double &

set_current_pose_landing_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_atom(const class core::id::AtomID &) –> void

set_current_pose_landing_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_landing_xyz(const class numeric::xyzVector<double> &) –> void

set_current_pose_takeoff_atom(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.core.id.AtomID) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_atom(const class core::id::AtomID &) –> void

set_current_pose_takeoff_xyz(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: pyrosetta.rosetta.numeric.xyzVector_double_t) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_current_pose_takeoff_xyz(const class numeric::xyzVector<double> &) –> void

set_involves_current_pose(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: bool) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_involves_current_pose(const bool &) –> void

set_loop_closure_energy(self: pyrosetta.rosetta.core.scoring.loop_graph.evaluator.LoopClosePotentialEvaluator, setting: float) → None

C++: core::scoring::loop_graph::evaluator::LoopClosePotentialEvaluator::set_loop_closure_energy(const double &) –> void

pyrosetta.rosetta.core.scoring.loop_graph.evaluator.get_minval_binwidth(T: pyrosetta.rosetta.numeric.MathNTensor_double_6_t, json: pyrosetta.rosetta.std.map_std_string_utility_json_spirit_Value_impl_utility_json_spirit_Config_map_std_string_t_std_allocator_std_pair_const_std_string_utility_json_spirit_Value_impl_utility_json_spirit_Config_map_std_string_t, minval: pyrosetta.rosetta.utility.fixedsizearray1_double_6_t, binwidth: pyrosetta.rosetta.utility.fixedsizearray1_double_6_t) → None

C++: core::scoring::loop_graph::evaluator::get_minval_binwidth(const class numeric::MathNTensor<double, 6> &, const class std::map<std::string, class utility::json_spirit::Value_impl<struct utility::json_spirit::Config_map<std::string > >, struct std::less<std::string >, class std::allocator<struct std::pair<const std::string, class utility::json_spirit::Value_impl<struct utility::json_spirit::Config_map<std::string > > > > > &, class utility::fixedsizearray1<double, 6> &, class utility::fixedsizearray1<double, 6> &) –> void