rosetta.core.scoring.etable.etrie
index
(built-in)

Bindings for core::scoring::etable::etrie namespace

 
Classes
       
builtins.object
CountPairDataGeneric
CountPairData_1_1
CountPairData_1_2
CountPairData_1_3
GenericResidueConnectionData
rosetta.core.conformation.Atom(builtins.object)
EtableAtom
rosetta.core.scoring.trie.TrieCountPairBase(builtins.object)
TrieCountPair1BC3
TrieCountPair1BC4
TrieCountPairAll
TrieCountPairGeneric
TrieCountPairNone

 
class CountPairDataGeneric(builtins.object)
     Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, other : rosetta.core.scoring.etable.etrie.CountPairDataGeneric) -> bool
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.CountPairDataGeneric) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.CountPairDataGeneric,  : rosetta.core.scoring.etable.etrie.CountPairDataGeneric) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
__str__(...) from builtins.PyCapsule
__str__(rosetta.core.scoring.etable.etrie.CountPairDataGeneric) -> str
conn_dat(...) from builtins.PyCapsule
conn_dat(self : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, which_connection : int) -> rosetta.core.scoring.etable.etrie.GenericResidueConnectionData
 
Indexed from 0.
conn_dist(...) from builtins.PyCapsule
conn_dist(self : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, which_connection : int) -> int
 
For use by the 1-connection TrieCountPair functions
 Indexed from 0.
n_connected_residues(...) from builtins.PyCapsule
n_connected_residues(rosetta.core.scoring.etable.etrie.CountPairDataGeneric) -> int
set_dist_to_connect_point(...) from builtins.PyCapsule
set_dist_to_connect_point(self : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, entry : int, connpoint : int, connection_dist : int) -> NoneType
 
"entry" is indexed from 1

 
class CountPairData_1_1(builtins.object)
     Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_1, other : rosetta.core.scoring.etable.etrie.CountPairData_1_1) -> bool
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.CountPairData_1_1) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_1,  : rosetta.core.scoring.etable.etrie.CountPairData_1_1) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
__str__(...) from builtins.PyCapsule
__str__(rosetta.core.scoring.etable.etrie.CountPairData_1_1) -> str
conn_dist(...) from builtins.PyCapsule
conn_dist(self : rosetta.core.scoring.etable.etrie.CountPairData_1_1,  : int) -> int
set_dist_to_connect_point(...) from builtins.PyCapsule
set_dist_to_connect_point(self : rosetta.core.scoring.etable.etrie.CountPairData_1_1, entry : int, connpoint : int, connection_dist : int) -> NoneType

 
class CountPairData_1_2(builtins.object)
     Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_2, other : rosetta.core.scoring.etable.etrie.CountPairData_1_2) -> bool
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.CountPairData_1_2) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_2,  : rosetta.core.scoring.etable.etrie.CountPairData_1_2) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
__str__(...) from builtins.PyCapsule
__str__(rosetta.core.scoring.etable.etrie.CountPairData_1_2) -> str
conn_dist(...) from builtins.PyCapsule
conn_dist(self : rosetta.core.scoring.etable.etrie.CountPairData_1_2, which_connection : int) -> int
set_dist_to_connect_point(...) from builtins.PyCapsule
set_dist_to_connect_point(self : rosetta.core.scoring.etable.etrie.CountPairData_1_2, entry : int, connpoint : int, connection_dist : int) -> NoneType

 
class CountPairData_1_3(builtins.object)
     Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_3, other : rosetta.core.scoring.etable.etrie.CountPairData_1_3) -> bool
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.CountPairData_1_3) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.CountPairData_1_3,  : rosetta.core.scoring.etable.etrie.CountPairData_1_3) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
__str__(...) from builtins.PyCapsule
__str__(rosetta.core.scoring.etable.etrie.CountPairData_1_3) -> str
conn_dist(...) from builtins.PyCapsule
conn_dist(self : rosetta.core.scoring.etable.etrie.CountPairData_1_3, which_connection : int) -> int
set_dist_to_connect_point(...) from builtins.PyCapsule
set_dist_to_connect_point(self : rosetta.core.scoring.etable.etrie.CountPairData_1_3, entry : int, connpoint : int, connection_dist : int) -> NoneType

 
class EtableAtom(rosetta.core.conformation.Atom)
    
Method resolution order:
EtableAtom
rosetta.core.conformation.Atom
builtins.object

Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.EtableAtom, other : rosetta.core.scoring.etable.etrie.EtableAtom) -> bool
 
equality operator for shared-prefix detection
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.EtableAtom) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.EtableAtom, res : rosetta.core.conformation.Residue, atom_index : int) -> NoneType
 
3. __init__(self : rosetta.core.scoring.etable.etrie.EtableAtom,  : rosetta.core.scoring.etable.etrie.EtableAtom) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
__str__(...) from builtins.PyCapsule
__str__(rosetta.core.scoring.etable.etrie.EtableAtom) -> str
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.etable.etrie.EtableAtom,  : rosetta.core.scoring.etable.etrie.EtableAtom) -> rosetta.core.scoring.etable.etrie.EtableAtom
atom_type(...) from builtins.PyCapsule
atom_type(*args, **kwargs)
Overloaded function.
 
1. atom_type(rosetta.core.scoring.etable.etrie.EtableAtom) -> int
 
deprecated!
 
2. atom_type(self : rosetta.core.scoring.etable.etrie.EtableAtom, setting : int) -> NoneType
 
deprecated!
is_hydrogen(...) from builtins.PyCapsule
is_hydrogen(*args, **kwargs)
Overloaded function.
 
1. is_hydrogen(rosetta.core.scoring.etable.etrie.EtableAtom) -> bool
 
property required by RotamerTrie class
 
2. is_hydrogen(self : rosetta.core.scoring.etable.etrie.EtableAtom, setting : bool) -> NoneType
 
setter method for data required by RotamerTrie class
print(...) from builtins.PyCapsule
print(rosetta.core.scoring.etable.etrie.EtableAtom) -> NoneType
 
send a description of the atom to standard out

Methods inherited from rosetta.core.conformation.Atom:
mm_type(...) from builtins.PyCapsule
mm_type(*args, **kwargs)
Overloaded function.
 
1. mm_type(self : rosetta.core.conformation.Atom, mm_type_in : int) -> NoneType
 
set the mm atom type number
 
2. mm_type(rosetta.core.conformation.Atom) -> int
 
get the mm atom type number
type(...) from builtins.PyCapsule
type(*args, **kwargs)
Overloaded function.
 
1. type(self : rosetta.core.conformation.Atom, type_in : int) -> NoneType
 
set the atom type number
 
2. type(rosetta.core.conformation.Atom) -> int
 
Returns the AtomType number
xyz(...) from builtins.PyCapsule
xyz(*args, **kwargs)
Overloaded function.
 
1. xyz(rosetta.core.conformation.Atom) -> rosetta.numeric.xyzVector_double_t
 
Returns the atom coordinates as an xyzVector
 
2. xyz(self : rosetta.core.conformation.Atom, xyz_in : rosetta.numeric.xyzVector_double_t) -> NoneType
 
Sets the atom coordinates using an xyzVector

 
class GenericResidueConnectionData(builtins.object)
     Methods defined here:
__eq__(...) from builtins.PyCapsule
__eq__(self : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData, other : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData) -> bool
__getitem__(...) from builtins.PyCapsule
__getitem__(self : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData, connection : int) -> int
 
getter
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.GenericResidueConnectionData) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData, n_connections : int) -> NoneType
__ne__(...) from builtins.PyCapsule
__ne__(self : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData, other : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData) -> bool
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
set_dist_to_connect_point(...) from builtins.PyCapsule
set_dist_to_connect_point(self : rosetta.core.scoring.etable.etrie.GenericResidueConnectionData, connpoint : int, connection_dist : int) -> NoneType
size(...) from builtins.PyCapsule
size(rosetta.core.scoring.etable.etrie.GenericResidueConnectionData) -> int

 
class TrieCountPair1BC3(rosetta.core.scoring.trie.TrieCountPairBase)
    
Method resolution order:
TrieCountPair1BC3
rosetta.core.scoring.trie.TrieCountPairBase
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPair1BC3, res1_cpdat_for_res2 : int, res2_cpdat_for_res1 : int) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPair1BC3,  : rosetta.core.scoring.etable.etrie.TrieCountPair1BC3) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
print(...) from builtins.PyCapsule
print() -> NoneType

Methods inherited from rosetta.core.scoring.trie.TrieCountPairBase:
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.trie.TrieCountPairBase,  : rosetta.core.scoring.trie.TrieCountPairBase) -> rosetta.core.scoring.trie.TrieCountPairBase

 
class TrieCountPair1BC4(rosetta.core.scoring.trie.TrieCountPairBase)
    
Method resolution order:
TrieCountPair1BC4
rosetta.core.scoring.trie.TrieCountPairBase
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPair1BC4, res1_cpdat_for_res2 : int, res2_cpdat_for_res1 : int) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPair1BC4,  : rosetta.core.scoring.etable.etrie.TrieCountPair1BC4) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.

Methods inherited from rosetta.core.scoring.trie.TrieCountPairBase:
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.trie.TrieCountPairBase,  : rosetta.core.scoring.trie.TrieCountPairBase) -> rosetta.core.scoring.trie.TrieCountPairBase

 
class TrieCountPairAll(rosetta.core.scoring.trie.TrieCountPairBase)
    
Method resolution order:
TrieCountPairAll
rosetta.core.scoring.trie.TrieCountPairBase
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.TrieCountPairAll) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPairAll,  : rosetta.core.scoring.etable.etrie.TrieCountPairAll) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.etable.etrie.TrieCountPairAll,  : rosetta.core.scoring.etable.etrie.TrieCountPairAll) -> rosetta.core.scoring.etable.etrie.TrieCountPairAll
print(...) from builtins.PyCapsule
print() -> NoneType

 
class TrieCountPairGeneric(rosetta.core.scoring.trie.TrieCountPairBase)
    
Method resolution order:
TrieCountPairGeneric
rosetta.core.scoring.trie.TrieCountPairBase
builtins.object

Methods defined here:
__call__(...) from builtins.PyCapsule
__call__(self : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric, at1dat : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, at2dat : rosetta.core.scoring.etable.etrie.CountPairDataGeneric, weight : float, path_dist : int) -> bool
 
------------ Useful Functions ------------------///
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, res1_cpdat_for_res2 : int, res2_cpdat_for_res1 : int) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric,  : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
crossover(...) from builtins.PyCapsule
crossover(self : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric, setting : int) -> NoneType
hard_crossover(...) from builtins.PyCapsule
hard_crossover(self : rosetta.core.scoring.etable.etrie.TrieCountPairGeneric, setting : bool) -> NoneType
print(...) from builtins.PyCapsule
print() -> NoneType

Methods inherited from rosetta.core.scoring.trie.TrieCountPairBase:
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.trie.TrieCountPairBase,  : rosetta.core.scoring.trie.TrieCountPairBase) -> rosetta.core.scoring.trie.TrieCountPairBase

 
class TrieCountPairNone(rosetta.core.scoring.trie.TrieCountPairBase)
    
Method resolution order:
TrieCountPairNone
rosetta.core.scoring.trie.TrieCountPairBase
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.etable.etrie.TrieCountPairNone) -> NoneType
 
2. __init__(self : rosetta.core.scoring.etable.etrie.TrieCountPairNone,  : rosetta.core.scoring.etable.etrie.TrieCountPairNone) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.etable.etrie.TrieCountPairNone,  : rosetta.core.scoring.etable.etrie.TrieCountPairNone) -> rosetta.core.scoring.etable.etrie.TrieCountPairNone
print(...) from builtins.PyCapsule
print() -> NoneType