Bindings for core::scoring::etable namespace

Modules
		rosetta.core.scoring.etable.coulomb rosetta.core.scoring.etable.count_pair rosetta.core.scoring.etable.etrie

Classes
		builtins.object AtomPairEnergy CubicPolynomial Etable MembEtable EtableEvaluator AnalyticEtableEvaluator TableLookupEvaluator EtableOptions EtableParamsOnePair ExtraQuadraticRepulsion SplineParameters rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy(rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy) BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t AnalyticEtableEnergy BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t TableLookupEtableEnergy rosetta.core.scoring.methods.EnergyMethodCreator(builtins.object) EtableClassicIntraEnergyCreator EtableEnergyCreator   class AnalyticEtableEnergy(BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t)       Method resolution order: AnalyticEtableEnergy BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy rosetta.core.scoring.methods.TwoBodyEnergy rosetta.core.scoring.methods.EnergyMethod builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle, rosetta.core.scoring.etable.Etable, rosetta.core.scoring.methods.EnergyMethodOptions) -> NoneType   doc   2. __init__(self : handle, etable_in : rosetta.core.scoring.etable.Etable, options : rosetta.core.scoring.methods.EnergyMethodOptions, do_classic_intrares : bool) -> NoneType   3. __init__(handle, rosetta.core.scoring.etable.AnalyticEtableEnergy) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. clone(...) from builtins.PyCapsule clone(rosetta.core.scoring.etable.AnalyticEtableEnergy) -> rosetta.core.scoring.methods.EnergyMethod   clone defines_intrares_energy(...) from builtins.PyCapsule defines_intrares_energy(self : rosetta.core.scoring.etable.AnalyticEtableEnergy,  : rosetta.core.scoring.EMapVector) -> bool   ////////////////////////////////////////////////////////////////////////// eval_intrares_energy(...) from builtins.PyCapsule eval_intrares_energy(self : rosetta.core.scoring.etable.AnalyticEtableEnergy, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType interres_evaluator(...) from builtins.PyCapsule interres_evaluator(*args, **kwargs) Overloaded function.   1. interres_evaluator(rosetta.core.scoring.etable.AnalyticEtableEnergy) -> rosetta.core.scoring.etable.AnalyticEtableEvaluator   2. interres_evaluator(rosetta.core.scoring.etable.AnalyticEtableEnergy) -> rosetta.core.scoring.etable.AnalyticEtableEvaluator intrares_evaluator(...) from builtins.PyCapsule intrares_evaluator(*args, **kwargs) Overloaded function.   1. intrares_evaluator(rosetta.core.scoring.etable.AnalyticEtableEnergy) -> rosetta.core.scoring.etable.AnalyticEtableEvaluator   2. intrares_evaluator(rosetta.core.scoring.etable.AnalyticEtableEnergy) -> rosetta.core.scoring.etable.AnalyticEtableEvaluator setup_for_scoring_(...) from builtins.PyCapsule setup_for_scoring_(self : rosetta.core.scoring.etable.AnalyticEtableEnergy, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType Methods inherited from BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t: assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy,  : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, dsq : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, bb : float, dsq : float) -> NoneType   3. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, ape : rosetta.core.scoring.etable.AtomPairEnergy) -> NoneType atomic_interaction_cutoff(...) from builtins.PyCapsule atomic_interaction_cutoff(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> float backbone_backbone_energy(...) from builtins.PyCapsule backbone_backbone_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType backbone_sidechain_energy(...) from builtins.PyCapsule backbone_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_backbone(...) from builtins.PyCapsule bump_energy_backbone(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_full(...) from builtins.PyCapsule bump_energy_full(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType calculate_interres(...) from builtins.PyCapsule calculate_interres(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue) -> bool calculate_intrares(...) from builtins.PyCapsule calculate_intrares(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue) -> bool divides_backbone_and_sidechain_energetics(...) from builtins.PyCapsule divides_backbone_and_sidechain_energetics(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool eval_atom_derivative(...) from builtins.PyCapsule eval_atom_derivative(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, id : rosetta.core.id.AtomID, pose : rosetta.core.pose.Pose,  : ObjexxFCL::FArray1D<int>, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, F1 : rosetta.numeric.xyzVector_double_t, F2 : rosetta.numeric.xyzVector_double_t) -> NoneType eval_intrares_derivatives(...) from builtins.PyCapsule eval_intrares_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, atom_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType eval_intrares_energy_ext(...) from builtins.PyCapsule eval_intrares_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType eval_residue_pair_derivatives(...) from builtins.PyCapsule eval_residue_pair_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue,  : rosetta.core.scoring.ResSingleMinimizationData,  : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, r1_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair, r2_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType evaluate_rotamer_background_energies(...) from builtins.PyCapsule evaluate_rotamer_background_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_vector : rosetta.utility.vector1_float) -> NoneType evaluate_rotamer_pair_energies(...) from builtins.PyCapsule evaluate_rotamer_pair_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, set1 : rosetta.core.conformation.RotamerSetBase, set2 : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_table : ObjexxFCL::FArray2D<float>) -> NoneType finalize_total_energy(...) from builtins.PyCapsule finalize_total_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, totals : rosetta.core.scoring.EMapVector) -> NoneType get_count_pair_function(...) from builtins.PyCapsule get_count_pair_function(*args, **kwargs) Overloaded function.   1. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction   2. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction get_intrares_countpair(...) from builtins.PyCapsule get_intrares_countpair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> float indicate_required_context_graphs(...) from builtins.PyCapsule indicate_required_context_graphs(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.utility.vector1_bool) -> NoneType method_type(...) from builtins.PyCapsule method_type(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.EnergyMethodType min_pair_data_type(...) from builtins.PyCapsule min_pair_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.min_pair_data min_single_data_type(...) from builtins.PyCapsule min_single_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.min_single_data minimize_in_whole_structure_context(...) from builtins.PyCapsule minimize_in_whole_structure_context(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.core.pose.Pose) -> bool nblist_type(...) from builtins.PyCapsule nblist_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.EnergiesCacheableDataType.Enum pair_energy_H(...) from builtins.PyCapsule pair_energy_H(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType prepare_for_residue_pair(...) from builtins.PyCapsule prepare_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose) -> NoneType prepare_rotamers_for_packing(...) from builtins.PyCapsule prepare_rotamers_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, set : rosetta.core.conformation.RotamerSetBase) -> NoneType requires_a_setup_for_derivatives_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_derivatives_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool residue_pair_energy(...) from builtins.PyCapsule residue_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_pair_energy_ext(...) from builtins.PyCapsule residue_pair_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType setup_for_derivatives(...) from builtins.PyCapsule setup_for_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_derivatives_for_residue(...) from builtins.PyCapsule setup_for_derivatives_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_derivatives_for_residue_pair(...) from builtins.PyCapsule setup_for_derivatives_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_minimizing(...) from builtins.PyCapsule setup_for_minimizing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, min_map : rosetta.core.kinematics.MinimizerMapBase) -> NoneType setup_for_minimizing_for_residue(...) from builtins.PyCapsule setup_for_minimizing_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_minimizing_for_residue_pair(...) from builtins.PyCapsule setup_for_minimizing_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, res1_data_cache : rosetta.core.scoring.ResSingleMinimizationData, res2_data_cache : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_packing(...) from builtins.PyCapsule setup_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.core.pose.Pose,  : rosetta.utility.vector1_bool,  : rosetta.utility.vector1_bool) -> NoneType setup_for_scoring(...) from builtins.PyCapsule setup_for_scoring(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_scoring_for_residue(...) from builtins.PyCapsule setup_for_scoring_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_scoring_for_residue_pair(...) from builtins.PyCapsule setup_for_scoring_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType sidechain_sidechain_energy(...) from builtins.PyCapsule sidechain_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType update_residue_for_packing(...) from builtins.PyCapsule update_residue_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, resid : int) -> NoneType use_extended_intrares_energy_interface(...) from builtins.PyCapsule use_extended_intrares_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool use_extended_residue_pair_energy_interface(...) from builtins.PyCapsule use_extended_residue_pair_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool Methods inherited from rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy: evaluate_rotamer_background_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_background_energy_maps(self : rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer/background energies.  Need not be overriden  in derived class -- by default, iterates over all rotamers in the set, and calls  derived class's residue_pair_energy method for each one against the background rotamer  Since short range rotamer pairs may not need calculation, the default method  looks at blocks of residue type pairs and only calls the residue_pair_energy method  if the rotamer pairs are within range Methods inherited from rosetta.core.scoring.methods.TwoBodyEnergy: defines_intrares_dof_derivatives(...) from builtins.PyCapsule defines_intrares_dof_derivatives(self : rosetta.core.scoring.methods.TwoBodyEnergy, p : rosetta.core.pose.Pose) -> bool   Use the dof_derivative interface for this energy method when  calculating derivatives?  It is possible to define both dof_derivatives and  atom-derivatives; they are not mutually exclusive. defines_intrares_energy_for_residue(...) from builtins.PyCapsule defines_intrares_energy_for_residue(self : rosetta.core.scoring.methods.TwoBodyEnergy, res : rosetta.core.conformation.Residue) -> bool   If a score function defines no intra-residue scores for a particular  residue, then it may opt-out of being asked during minimization to evaluate  the score for this residue. defines_score_for_residue_pair(...) from builtins.PyCapsule defines_score_for_residue_pair(self : rosetta.core.scoring.methods.TwoBodyEnergy, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, res_moving_wrt_eachother : bool) -> bool   During minimization, energy methods are allowed to decide that they say nothing  about a particular residue pair (e.g. no non-zero energy) and as a result they will not be queried for  a derivative or an energy.  The default implementation returns "true" for all residue pairs.  Context-dependent two-body energies have the option of behaving as if they are context-independent  by returning "false" for residue pairs that do no move wrt each other. eval_intraresidue_dof_derivative(...) from builtins.PyCapsule eval_intraresidue_dof_derivative(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, dof_id : rosetta.core.id.DOF_ID, torsion_id : rosetta.core.id.TorsionID, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector) -> float   Evaluate the DOF derivative for a particular residue.  The Pose merely serves as context,  and the input residue is not required to be a member of the Pose. evaluate_rotamer_intrares_energies(...) from builtins.PyCapsule evaluate_rotamer_intrares_energies(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, energies : rosetta.utility.vector1_float) -> NoneType   Batch computation of rotamer intrares energies.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. evaluate_rotamer_intrares_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_intrares_energy_maps(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer intrares energy map.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. Methods inherited from rosetta.core.scoring.methods.EnergyMethod: defines_high_order_terms(...) from builtins.PyCapsule defines_high_order_terms(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose) -> bool   Should this EnergyMethod have score and derivative evaluation  evaluated both in the context of the whole Pose and in the context  of residue or residue-pairs?  This covers scoring terms like env-smooth  wherein the CBeta's get derivatives for increasing the neighbor counts  for surrounding residues, and terms like constraints, which are definable  on arbitrary number of residues (e.g. more than 2); both of these terms  could be used in RTMin, and both should use the residue and residue-pair  evaluation scheme with the MinimizationGraph for the majority of the  work they do.  (Now, high-order constraints (3-body or above) will not  be properly evaluated within RTMin.).  The default implementation  returns "false". finalize_after_derivatives(...) from builtins.PyCapsule finalize_after_derivatives(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType   called at the end of derivatives evaluation score_types(...) from builtins.PyCapsule score_types(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.utility.vector1_core_scoring_ScoreType   Returns the score types that this energy method computes. version(...) from builtins.PyCapsule version(rosetta.core.scoring.methods.EnergyMethod) -> int   Return the version of the energy method   class AnalyticEtableEvaluator(EtableEvaluator)       Method resolution order: AnalyticEtableEvaluator EtableEvaluator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(self : handle, etable : rosetta.core.scoring.etable.Etable) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, d2 : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, d2 : float) -> NoneType atom_pair_energy_v(...) from builtins.PyCapsule atom_pair_energy_v(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atrE : float, repE : float, solE : float, d2 : float) -> NoneType atom_pair_lk_energy_and_deriv_v(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v(*args, **kwargs) Overloaded function.   1. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float) -> NoneType   2. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float, eval_deriv : bool) -> NoneType atom_pair_lk_energy_and_deriv_v_efficient(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v_efficient(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, solE2 : float, dsolE1 : float, eval_deriv : bool) -> NoneType eval_dE_dR_over_r(...) from builtins.PyCapsule eval_dE_dR_over_r(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weights : rosetta.core.scoring.EMapVector, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> float eval_dE_dR_over_r_v(...) from builtins.PyCapsule eval_dE_dR_over_r_v(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weights : rosetta.core.scoring.EMapVector, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> float heavyatom_heavyatom_energy(...) from builtins.PyCapsule heavyatom_heavyatom_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom, d2 : float,  : int) -> float   Inline Methods For Trie-vs-Trie Algorithm heavyatom_hydrogenatom_energy(...) from builtins.PyCapsule heavyatom_hydrogenatom_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float hydrogenatom_heavyatom_energy(...) from builtins.PyCapsule hydrogenatom_heavyatom_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float hydrogenatom_hydrogenatom_energy(...) from builtins.PyCapsule hydrogenatom_hydrogenatom_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float pair_energy_H(...) from builtins.PyCapsule pair_energy_H(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType pair_energy_H_v(...) from builtins.PyCapsule pair_energy_H_v(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy(...) from builtins.PyCapsule residue_atom_pair_energy(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType   Atom pair energy inline type resolution functions residue_atom_pair_energy_backbone_backbone(...) from builtins.PyCapsule residue_atom_pair_energy_backbone_backbone(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_backbone(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_backbone(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_sidechain(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_sidechain(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_whole(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_whole(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType trie_vs_path(...) from builtins.PyCapsule trie_vs_path(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, trie1 : rosetta.core.scoring.trie.RotamerTrieBase, trie2 : rosetta.core.scoring.trie.RotamerTrieBase, cp : rosetta.core.scoring.trie.TrieCountPairBase, pair_energy_vector : rosetta.utility.vector1_float, temp_vector : rosetta.utility.vector1_float) -> NoneType trie_vs_trie(...) from builtins.PyCapsule trie_vs_trie(self : rosetta.core.scoring.etable.AnalyticEtableEvaluator, trie1 : rosetta.core.scoring.trie.RotamerTrieBase, trie2 : rosetta.core.scoring.trie.RotamerTrieBase, cp : rosetta.core.scoring.trie.TrieCountPairBase, pair_energy_table : ObjexxFCL::FArray2D<float>, temp_table : ObjexxFCL::FArray2D<float>) -> NoneType   Trie vs trie / trie vs path type resolution functions Methods inherited from EtableEvaluator: assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableEvaluator,  : rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.etable.EtableEvaluator atr_weight(...) from builtins.PyCapsule atr_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.EtableEvaluator) -> float rep_weight(...) from builtins.PyCapsule rep_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float set_scoretypes(...) from builtins.PyCapsule set_scoretypes(self : rosetta.core.scoring.etable.EtableEvaluator, st_atr_in : rosetta.core.scoring.ScoreType, st_rep_in : rosetta.core.scoring.ScoreType, st_sol_in : rosetta.core.scoring.ScoreType) -> NoneType set_weights(...) from builtins.PyCapsule set_weights(self : rosetta.core.scoring.etable.EtableEvaluator, weights : rosetta.core.scoring.EMapVector) -> NoneType sol_weight(...) from builtins.PyCapsule sol_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float st_atr(...) from builtins.PyCapsule st_atr(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_rep(...) from builtins.PyCapsule st_rep(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_sol(...) from builtins.PyCapsule st_sol(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType sum_energies(...) from builtins.PyCapsule sum_energies(self : rosetta.core.scoring.etable.EtableEvaluator, atr : float, rep : float, solv : float) -> float   class AtomPairEnergy(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(rosetta.core.scoring.etable.AtomPairEnergy) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. Data descriptors defined here: attractive bead_bead_interaction distance_squared repulsive solvation   class BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy)       Method resolution order: BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy rosetta.core.scoring.methods.TwoBodyEnergy rosetta.core.scoring.methods.EnergyMethod builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rosetta.core.scoring.methods.EnergyMethodCreator, rosetta.core.scoring.etable.Etable, rosetta.core.scoring.methods.EnergyMethodOptions) -> NoneType   doc   2. __init__(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, creator : rosetta.core.scoring.methods.EnergyMethodCreator, etable_in : rosetta.core.scoring.etable.Etable, options : rosetta.core.scoring.methods.EnergyMethodOptions, do_classic_intrares_ : bool) -> NoneType   3. __init__(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy,  : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, dsq : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, bb : float, dsq : float) -> NoneType   3. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, ape : rosetta.core.scoring.etable.AtomPairEnergy) -> NoneType atomic_interaction_cutoff(...) from builtins.PyCapsule atomic_interaction_cutoff(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> float backbone_backbone_energy(...) from builtins.PyCapsule backbone_backbone_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType backbone_sidechain_energy(...) from builtins.PyCapsule backbone_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_backbone(...) from builtins.PyCapsule bump_energy_backbone(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_full(...) from builtins.PyCapsule bump_energy_full(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType calculate_interres(...) from builtins.PyCapsule calculate_interres(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue) -> bool calculate_intrares(...) from builtins.PyCapsule calculate_intrares(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue) -> bool divides_backbone_and_sidechain_energetics(...) from builtins.PyCapsule divides_backbone_and_sidechain_energetics(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool eval_atom_derivative(...) from builtins.PyCapsule eval_atom_derivative(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, id : rosetta.core.id.AtomID, pose : rosetta.core.pose.Pose,  : ObjexxFCL::FArray1D<int>, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, F1 : rosetta.numeric.xyzVector_double_t, F2 : rosetta.numeric.xyzVector_double_t) -> NoneType eval_intrares_derivatives(...) from builtins.PyCapsule eval_intrares_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, atom_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType eval_intrares_energy_ext(...) from builtins.PyCapsule eval_intrares_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType eval_residue_pair_derivatives(...) from builtins.PyCapsule eval_residue_pair_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue,  : rosetta.core.scoring.ResSingleMinimizationData,  : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, r1_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair, r2_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType evaluate_rotamer_background_energies(...) from builtins.PyCapsule evaluate_rotamer_background_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_vector : rosetta.utility.vector1_float) -> NoneType evaluate_rotamer_pair_energies(...) from builtins.PyCapsule evaluate_rotamer_pair_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, set1 : rosetta.core.conformation.RotamerSetBase, set2 : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_table : ObjexxFCL::FArray2D<float>) -> NoneType finalize_total_energy(...) from builtins.PyCapsule finalize_total_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, totals : rosetta.core.scoring.EMapVector) -> NoneType get_count_pair_function(...) from builtins.PyCapsule get_count_pair_function(*args, **kwargs) Overloaded function.   1. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction   2. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction get_intrares_countpair(...) from builtins.PyCapsule get_intrares_countpair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> float indicate_required_context_graphs(...) from builtins.PyCapsule indicate_required_context_graphs(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.utility.vector1_bool) -> NoneType method_type(...) from builtins.PyCapsule method_type(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.EnergyMethodType min_pair_data_type(...) from builtins.PyCapsule min_pair_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.min_pair_data min_single_data_type(...) from builtins.PyCapsule min_single_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.min_single_data minimize_in_whole_structure_context(...) from builtins.PyCapsule minimize_in_whole_structure_context(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.core.pose.Pose) -> bool nblist_type(...) from builtins.PyCapsule nblist_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> rosetta.core.scoring.EnergiesCacheableDataType.Enum pair_energy_H(...) from builtins.PyCapsule pair_energy_H(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType prepare_for_residue_pair(...) from builtins.PyCapsule prepare_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose) -> NoneType prepare_rotamers_for_packing(...) from builtins.PyCapsule prepare_rotamers_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, set : rosetta.core.conformation.RotamerSetBase) -> NoneType requires_a_setup_for_derivatives_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_derivatives_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool residue_pair_energy(...) from builtins.PyCapsule residue_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_pair_energy_ext(...) from builtins.PyCapsule residue_pair_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType setup_for_derivatives(...) from builtins.PyCapsule setup_for_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_derivatives_for_residue(...) from builtins.PyCapsule setup_for_derivatives_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_derivatives_for_residue_pair(...) from builtins.PyCapsule setup_for_derivatives_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_minimizing(...) from builtins.PyCapsule setup_for_minimizing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, min_map : rosetta.core.kinematics.MinimizerMapBase) -> NoneType setup_for_minimizing_for_residue(...) from builtins.PyCapsule setup_for_minimizing_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_minimizing_for_residue_pair(...) from builtins.PyCapsule setup_for_minimizing_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, res1_data_cache : rosetta.core.scoring.ResSingleMinimizationData, res2_data_cache : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_packing(...) from builtins.PyCapsule setup_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t,  : rosetta.core.pose.Pose,  : rosetta.utility.vector1_bool,  : rosetta.utility.vector1_bool) -> NoneType setup_for_scoring(...) from builtins.PyCapsule setup_for_scoring(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_scoring_for_residue(...) from builtins.PyCapsule setup_for_scoring_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_scoring_for_residue_pair(...) from builtins.PyCapsule setup_for_scoring_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType sidechain_sidechain_energy(...) from builtins.PyCapsule sidechain_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType update_residue_for_packing(...) from builtins.PyCapsule update_residue_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t, pose : rosetta.core.pose.Pose, resid : int) -> NoneType use_extended_intrares_energy_interface(...) from builtins.PyCapsule use_extended_intrares_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool use_extended_residue_pair_energy_interface(...) from builtins.PyCapsule use_extended_residue_pair_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_AnalyticEtableEnergy_t) -> bool Methods inherited from rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy: evaluate_rotamer_background_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_background_energy_maps(self : rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer/background energies.  Need not be overriden  in derived class -- by default, iterates over all rotamers in the set, and calls  derived class's residue_pair_energy method for each one against the background rotamer  Since short range rotamer pairs may not need calculation, the default method  looks at blocks of residue type pairs and only calls the residue_pair_energy method  if the rotamer pairs are within range Methods inherited from rosetta.core.scoring.methods.TwoBodyEnergy: defines_intrares_dof_derivatives(...) from builtins.PyCapsule defines_intrares_dof_derivatives(self : rosetta.core.scoring.methods.TwoBodyEnergy, p : rosetta.core.pose.Pose) -> bool   Use the dof_derivative interface for this energy method when  calculating derivatives?  It is possible to define both dof_derivatives and  atom-derivatives; they are not mutually exclusive. defines_intrares_energy(...) from builtins.PyCapsule defines_intrares_energy(self : rosetta.core.scoring.methods.TwoBodyEnergy, weights : rosetta.core.scoring.EMapVector) -> bool   Two body energies are able to define intra-residue energies, and to do so  only in the presence of certain non-zero weights.  The ScoreFunction will hand over its  weight set as it asks whether the energy method defines an intraresidue energy or not.    For example, the Etable method defines intra-residue energies only when one or more  of the fa_intra_{atr,rep,sol} weights are non-zero. defines_intrares_energy_for_residue(...) from builtins.PyCapsule defines_intrares_energy_for_residue(self : rosetta.core.scoring.methods.TwoBodyEnergy, res : rosetta.core.conformation.Residue) -> bool   If a score function defines no intra-residue scores for a particular  residue, then it may opt-out of being asked during minimization to evaluate  the score for this residue. defines_score_for_residue_pair(...) from builtins.PyCapsule defines_score_for_residue_pair(self : rosetta.core.scoring.methods.TwoBodyEnergy, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, res_moving_wrt_eachother : bool) -> bool   During minimization, energy methods are allowed to decide that they say nothing  about a particular residue pair (e.g. no non-zero energy) and as a result they will not be queried for  a derivative or an energy.  The default implementation returns "true" for all residue pairs.  Context-dependent two-body energies have the option of behaving as if they are context-independent  by returning "false" for residue pairs that do no move wrt each other. eval_intrares_energy(...) from builtins.PyCapsule eval_intrares_energy(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType   Evaluate the intra-residue energy for a given residue eval_intraresidue_dof_derivative(...) from builtins.PyCapsule eval_intraresidue_dof_derivative(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, dof_id : rosetta.core.id.DOF_ID, torsion_id : rosetta.core.id.TorsionID, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector) -> float   Evaluate the DOF derivative for a particular residue.  The Pose merely serves as context,  and the input residue is not required to be a member of the Pose. evaluate_rotamer_intrares_energies(...) from builtins.PyCapsule evaluate_rotamer_intrares_energies(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, energies : rosetta.utility.vector1_float) -> NoneType   Batch computation of rotamer intrares energies.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. evaluate_rotamer_intrares_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_intrares_energy_maps(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer intrares energy map.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. Methods inherited from rosetta.core.scoring.methods.EnergyMethod: clone(...) from builtins.PyCapsule clone(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.core.scoring.methods.EnergyMethod defines_high_order_terms(...) from builtins.PyCapsule defines_high_order_terms(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose) -> bool   Should this EnergyMethod have score and derivative evaluation  evaluated both in the context of the whole Pose and in the context  of residue or residue-pairs?  This covers scoring terms like env-smooth  wherein the CBeta's get derivatives for increasing the neighbor counts  for surrounding residues, and terms like constraints, which are definable  on arbitrary number of residues (e.g. more than 2); both of these terms  could be used in RTMin, and both should use the residue and residue-pair  evaluation scheme with the MinimizationGraph for the majority of the  work they do.  (Now, high-order constraints (3-body or above) will not  be properly evaluated within RTMin.).  The default implementation  returns "false". finalize_after_derivatives(...) from builtins.PyCapsule finalize_after_derivatives(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType   called at the end of derivatives evaluation score_types(...) from builtins.PyCapsule score_types(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.utility.vector1_core_scoring_ScoreType   Returns the score types that this energy method computes. version(...) from builtins.PyCapsule version(rosetta.core.scoring.methods.EnergyMethod) -> int   Return the version of the energy method   class BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy)       Method resolution order: BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy rosetta.core.scoring.methods.TwoBodyEnergy rosetta.core.scoring.methods.EnergyMethod builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rosetta.core.scoring.methods.EnergyMethodCreator, rosetta.core.scoring.etable.Etable, rosetta.core.scoring.methods.EnergyMethodOptions) -> NoneType   doc   2. __init__(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, creator : rosetta.core.scoring.methods.EnergyMethodCreator, etable_in : rosetta.core.scoring.etable.Etable, options : rosetta.core.scoring.methods.EnergyMethodOptions, do_classic_intrares_ : bool) -> NoneType   3. __init__(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy,  : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, dsq : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, bb : float, dsq : float) -> NoneType   3. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, ape : rosetta.core.scoring.etable.AtomPairEnergy) -> NoneType atomic_interaction_cutoff(...) from builtins.PyCapsule atomic_interaction_cutoff(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> float backbone_backbone_energy(...) from builtins.PyCapsule backbone_backbone_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType backbone_sidechain_energy(...) from builtins.PyCapsule backbone_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_backbone(...) from builtins.PyCapsule bump_energy_backbone(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_full(...) from builtins.PyCapsule bump_energy_full(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType calculate_interres(...) from builtins.PyCapsule calculate_interres(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue) -> bool calculate_intrares(...) from builtins.PyCapsule calculate_intrares(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue) -> bool divides_backbone_and_sidechain_energetics(...) from builtins.PyCapsule divides_backbone_and_sidechain_energetics(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool eval_atom_derivative(...) from builtins.PyCapsule eval_atom_derivative(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, id : rosetta.core.id.AtomID, pose : rosetta.core.pose.Pose,  : ObjexxFCL::FArray1D<int>, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, F1 : rosetta.numeric.xyzVector_double_t, F2 : rosetta.numeric.xyzVector_double_t) -> NoneType eval_intrares_derivatives(...) from builtins.PyCapsule eval_intrares_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, atom_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType eval_intrares_energy_ext(...) from builtins.PyCapsule eval_intrares_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType eval_residue_pair_derivatives(...) from builtins.PyCapsule eval_residue_pair_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue,  : rosetta.core.scoring.ResSingleMinimizationData,  : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, r1_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair, r2_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType evaluate_rotamer_background_energies(...) from builtins.PyCapsule evaluate_rotamer_background_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_vector : rosetta.utility.vector1_float) -> NoneType evaluate_rotamer_pair_energies(...) from builtins.PyCapsule evaluate_rotamer_pair_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, set1 : rosetta.core.conformation.RotamerSetBase, set2 : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_table : ObjexxFCL::FArray2D<float>) -> NoneType finalize_total_energy(...) from builtins.PyCapsule finalize_total_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, totals : rosetta.core.scoring.EMapVector) -> NoneType get_count_pair_function(...) from builtins.PyCapsule get_count_pair_function(*args, **kwargs) Overloaded function.   1. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction   2. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction get_intrares_countpair(...) from builtins.PyCapsule get_intrares_countpair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> float indicate_required_context_graphs(...) from builtins.PyCapsule indicate_required_context_graphs(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.utility.vector1_bool) -> NoneType method_type(...) from builtins.PyCapsule method_type(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.EnergyMethodType min_pair_data_type(...) from builtins.PyCapsule min_pair_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.min_pair_data min_single_data_type(...) from builtins.PyCapsule min_single_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.min_single_data minimize_in_whole_structure_context(...) from builtins.PyCapsule minimize_in_whole_structure_context(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.core.pose.Pose) -> bool nblist_type(...) from builtins.PyCapsule nblist_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.EnergiesCacheableDataType.Enum pair_energy_H(...) from builtins.PyCapsule pair_energy_H(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType prepare_for_residue_pair(...) from builtins.PyCapsule prepare_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose) -> NoneType prepare_rotamers_for_packing(...) from builtins.PyCapsule prepare_rotamers_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, set : rosetta.core.conformation.RotamerSetBase) -> NoneType requires_a_setup_for_derivatives_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_derivatives_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool residue_pair_energy(...) from builtins.PyCapsule residue_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_pair_energy_ext(...) from builtins.PyCapsule residue_pair_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType setup_for_derivatives(...) from builtins.PyCapsule setup_for_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_derivatives_for_residue(...) from builtins.PyCapsule setup_for_derivatives_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_derivatives_for_residue_pair(...) from builtins.PyCapsule setup_for_derivatives_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_minimizing(...) from builtins.PyCapsule setup_for_minimizing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, min_map : rosetta.core.kinematics.MinimizerMapBase) -> NoneType setup_for_minimizing_for_residue(...) from builtins.PyCapsule setup_for_minimizing_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_minimizing_for_residue_pair(...) from builtins.PyCapsule setup_for_minimizing_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, res1_data_cache : rosetta.core.scoring.ResSingleMinimizationData, res2_data_cache : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_packing(...) from builtins.PyCapsule setup_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.core.pose.Pose,  : rosetta.utility.vector1_bool,  : rosetta.utility.vector1_bool) -> NoneType setup_for_scoring(...) from builtins.PyCapsule setup_for_scoring(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_scoring_for_residue(...) from builtins.PyCapsule setup_for_scoring_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_scoring_for_residue_pair(...) from builtins.PyCapsule setup_for_scoring_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType sidechain_sidechain_energy(...) from builtins.PyCapsule sidechain_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType update_residue_for_packing(...) from builtins.PyCapsule update_residue_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, resid : int) -> NoneType use_extended_intrares_energy_interface(...) from builtins.PyCapsule use_extended_intrares_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool use_extended_residue_pair_energy_interface(...) from builtins.PyCapsule use_extended_residue_pair_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool Methods inherited from rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy: evaluate_rotamer_background_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_background_energy_maps(self : rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer/background energies.  Need not be overriden  in derived class -- by default, iterates over all rotamers in the set, and calls  derived class's residue_pair_energy method for each one against the background rotamer  Since short range rotamer pairs may not need calculation, the default method  looks at blocks of residue type pairs and only calls the residue_pair_energy method  if the rotamer pairs are within range Methods inherited from rosetta.core.scoring.methods.TwoBodyEnergy: defines_intrares_dof_derivatives(...) from builtins.PyCapsule defines_intrares_dof_derivatives(self : rosetta.core.scoring.methods.TwoBodyEnergy, p : rosetta.core.pose.Pose) -> bool   Use the dof_derivative interface for this energy method when  calculating derivatives?  It is possible to define both dof_derivatives and  atom-derivatives; they are not mutually exclusive. defines_intrares_energy(...) from builtins.PyCapsule defines_intrares_energy(self : rosetta.core.scoring.methods.TwoBodyEnergy, weights : rosetta.core.scoring.EMapVector) -> bool   Two body energies are able to define intra-residue energies, and to do so  only in the presence of certain non-zero weights.  The ScoreFunction will hand over its  weight set as it asks whether the energy method defines an intraresidue energy or not.    For example, the Etable method defines intra-residue energies only when one or more  of the fa_intra_{atr,rep,sol} weights are non-zero. defines_intrares_energy_for_residue(...) from builtins.PyCapsule defines_intrares_energy_for_residue(self : rosetta.core.scoring.methods.TwoBodyEnergy, res : rosetta.core.conformation.Residue) -> bool   If a score function defines no intra-residue scores for a particular  residue, then it may opt-out of being asked during minimization to evaluate  the score for this residue. defines_score_for_residue_pair(...) from builtins.PyCapsule defines_score_for_residue_pair(self : rosetta.core.scoring.methods.TwoBodyEnergy, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, res_moving_wrt_eachother : bool) -> bool   During minimization, energy methods are allowed to decide that they say nothing  about a particular residue pair (e.g. no non-zero energy) and as a result they will not be queried for  a derivative or an energy.  The default implementation returns "true" for all residue pairs.  Context-dependent two-body energies have the option of behaving as if they are context-independent  by returning "false" for residue pairs that do no move wrt each other. eval_intrares_energy(...) from builtins.PyCapsule eval_intrares_energy(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType   Evaluate the intra-residue energy for a given residue eval_intraresidue_dof_derivative(...) from builtins.PyCapsule eval_intraresidue_dof_derivative(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, dof_id : rosetta.core.id.DOF_ID, torsion_id : rosetta.core.id.TorsionID, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector) -> float   Evaluate the DOF derivative for a particular residue.  The Pose merely serves as context,  and the input residue is not required to be a member of the Pose. evaluate_rotamer_intrares_energies(...) from builtins.PyCapsule evaluate_rotamer_intrares_energies(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, energies : rosetta.utility.vector1_float) -> NoneType   Batch computation of rotamer intrares energies.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. evaluate_rotamer_intrares_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_intrares_energy_maps(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer intrares energy map.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. Methods inherited from rosetta.core.scoring.methods.EnergyMethod: clone(...) from builtins.PyCapsule clone(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.core.scoring.methods.EnergyMethod defines_high_order_terms(...) from builtins.PyCapsule defines_high_order_terms(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose) -> bool   Should this EnergyMethod have score and derivative evaluation  evaluated both in the context of the whole Pose and in the context  of residue or residue-pairs?  This covers scoring terms like env-smooth  wherein the CBeta's get derivatives for increasing the neighbor counts  for surrounding residues, and terms like constraints, which are definable  on arbitrary number of residues (e.g. more than 2); both of these terms  could be used in RTMin, and both should use the residue and residue-pair  evaluation scheme with the MinimizationGraph for the majority of the  work they do.  (Now, high-order constraints (3-body or above) will not  be properly evaluated within RTMin.).  The default implementation  returns "false". finalize_after_derivatives(...) from builtins.PyCapsule finalize_after_derivatives(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType   called at the end of derivatives evaluation score_types(...) from builtins.PyCapsule score_types(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.utility.vector1_core_scoring_ScoreType   Returns the score types that this energy method computes. version(...) from builtins.PyCapsule version(rosetta.core.scoring.methods.EnergyMethod) -> int   Return the version of the energy method   class CubicPolynomial(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.scoring.etable.CubicPolynomial) -> NoneType   2. __init__(self : rosetta.core.scoring.etable.CubicPolynomial,  : rosetta.core.scoring.etable.CubicPolynomial) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.CubicPolynomial,  : rosetta.core.scoring.etable.CubicPolynomial) -> rosetta.core.scoring.etable.CubicPolynomial Data descriptors defined here: c0 c1 c2 c3   class Etable(builtins.object)     Class definition for Etable     Methods defined here: Wradius(...) from builtins.PyCapsule Wradius(rosetta.core.scoring.etable.Etable) -> float __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle, rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t, rosetta.core.scoring.etable.EtableOptions) -> NoneType   doc   2. __init__(self : handle, atom_set_in : rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t, options : rosetta.core.scoring.etable.EtableOptions, alternate_parameter_set : str) -> NoneType   3. __init__(handle, rosetta.core.scoring.etable.Etable) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. add_long_range_damping(...) from builtins.PyCapsule add_long_range_damping(rosetta.core.scoring.etable.Etable) -> bool analytic_etable_derivatives(...) from builtins.PyCapsule analytic_etable_derivatives(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, dljatrE_ddis : float, dljrepE_ddis : float, dfasolE_ddis : float, inv_d : float) -> NoneType   Analytically evaluate the energy derivatives for a pair of atoms analytic_etable_evaluation(...) from builtins.PyCapsule analytic_etable_evaluation(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, lj_atrE : float, lj_repE : float, fa_solE : float, d2 : float) -> NoneType   Use an analytic functional form of the etable to evaluate an atom-pair energy  without reading from the enormous and uncachable tables. analytic_lk_derivatives(...) from builtins.PyCapsule analytic_lk_derivatives(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, dfasolE1_ddis : float, dfasolE2_ddis : float, inv_d : float) -> NoneType   Analytically evaluate the LK solvation derivatives for a pair of atoms, separately  computing the derivative for atom2's desolvation of atom1 (dfasolE1_ddis) and atom1's desolvation  of atom2 (dfasolE2_ddis). analytic_lk_energy(...) from builtins.PyCapsule analytic_lk_energy(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, fa_solE1 : float, fa_solE2 : float) -> NoneType   Use an analytic functional form of the etable to evaluate only the LK atom-pair energy  computing the desolvation of atom1 by atom2 separately from the desolvation of atom2 by atom1. analytic_params_for_pair(...) from builtins.PyCapsule analytic_params_for_pair(self : rosetta.core.scoring.etable.Etable, atype1 : int, atype2 : int) -> rosetta.core.scoring.etable.EtableParamsOnePair atom_set(...) from builtins.PyCapsule atom_set(rosetta.core.scoring.etable.Etable) -> rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t atom_type(...) from builtins.PyCapsule atom_type(self : rosetta.core.scoring.etable.Etable, type : int) -> rosetta.core.chemical.AtomType cubic_polynomial_deriv(...) from builtins.PyCapsule cubic_polynomial_deriv(x : float, cp : rosetta.core.scoring.etable.CubicPolynomial) -> float cubic_polynomial_from_spline(...) from builtins.PyCapsule cubic_polynomial_from_spline(xlo : float, xhi : float, sp : rosetta.core.scoring.etable.SplineParameters) -> rosetta.core.scoring.etable.CubicPolynomial dljatr(...) from builtins.PyCapsule dljatr(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   const access to the deriv arrays dljrep(...) from builtins.PyCapsule dljrep(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double> dsolv(...) from builtins.PyCapsule dsolv(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   return the solvation derivative table that combines atom1 and atom2's desolvations dsolv1(...) from builtins.PyCapsule dsolv1(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   return the solvation derivative table for the desolvation of atom1 by atom2 epsilon(...) from builtins.PyCapsule epsilon(rosetta.core.scoring.etable.Etable) -> float etable_disbins(...) from builtins.PyCapsule etable_disbins(rosetta.core.scoring.etable.Etable) -> float eval_cubic_polynomial(...) from builtins.PyCapsule eval_cubic_polynomial(x : float, sp : rosetta.core.scoring.etable.CubicPolynomial) -> float fasol_cubic_poly_far_xhi(...) from builtins.PyCapsule fasol_cubic_poly_far_xhi(rosetta.core.scoring.etable.Etable) -> float fasol_cubic_poly_far_xlo(...) from builtins.PyCapsule fasol_cubic_poly_far_xlo(rosetta.core.scoring.etable.Etable) -> float get_bins_per_A2(...) from builtins.PyCapsule get_bins_per_A2(rosetta.core.scoring.etable.Etable) -> int get_lj_hbond_OH_donor_dis(...) from builtins.PyCapsule get_lj_hbond_OH_donor_dis(rosetta.core.scoring.etable.Etable) -> float get_lj_hbond_dis(...) from builtins.PyCapsule get_lj_hbond_dis(rosetta.core.scoring.etable.Etable) -> float get_lj_hbond_hdis(...) from builtins.PyCapsule get_lj_hbond_hdis(rosetta.core.scoring.etable.Etable) -> float get_safe_max_dis2(...) from builtins.PyCapsule get_safe_max_dis2(rosetta.core.scoring.etable.Etable) -> float hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.Etable) -> float interpolated_analytic_etable_evaluation(...) from builtins.PyCapsule interpolated_analytic_etable_evaluation(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, lj_atrE : float, lj_repE : float, fa_solE : float, d2 : float) -> NoneType   Use the analytic_etable_evaluation function to evaluate the energy  of two atoms, but  evaluate the function at the old grid points and then  interpolate between them the way the existing etable does (in square  distance space). Useful for comparing the original etable evaluation with the  analytic evaluation. lj_radius(...) from builtins.PyCapsule lj_radius(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lennard-Jones radius for an atom. lj_slope_intercept(...) from builtins.PyCapsule lj_slope_intercept(rosetta.core.scoring.etable.Etable) -> float lj_switch_dis2sigma(...) from builtins.PyCapsule lj_switch_dis2sigma(rosetta.core.scoring.etable.Etable) -> float lj_use_hbond_radii(...) from builtins.PyCapsule lj_use_hbond_radii(rosetta.core.scoring.etable.Etable) -> bool lj_use_lj_deriv_slope(...) from builtins.PyCapsule lj_use_lj_deriv_slope(rosetta.core.scoring.etable.Etable) -> bool lj_use_water_radii(...) from builtins.PyCapsule lj_use_water_radii(rosetta.core.scoring.etable.Etable) -> bool lj_water_dis(...) from builtins.PyCapsule lj_water_dis(rosetta.core.scoring.etable.Etable) -> float lj_water_hdis(...) from builtins.PyCapsule lj_water_hdis(rosetta.core.scoring.etable.Etable) -> float lj_wdepth(...) from builtins.PyCapsule lj_wdepth(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lennard-Jones well depth for an atom ljatr(...) from builtins.PyCapsule ljatr(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   const access to the arrays ljrep(...) from builtins.PyCapsule ljrep(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double> lk_dgfree(...) from builtins.PyCapsule lk_dgfree(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lazardis Karplus DGFree value for an atom lk_inv_lambda2(...) from builtins.PyCapsule lk_inv_lambda2(self : rosetta.core.scoring.etable.Etable, i : int) -> float lk_lambda(...) from builtins.PyCapsule lk_lambda(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lazaridis Karplus "lambda" value (correlation distance) for an atom lk_min_dis2sigma(...) from builtins.PyCapsule lk_min_dis2sigma(rosetta.core.scoring.etable.Etable) -> float lk_volume(...) from builtins.PyCapsule lk_volume(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lazaridis Karplus volume for an atom long_range_damping_length(...) from builtins.PyCapsule long_range_damping_length(rosetta.core.scoring.etable.Etable) -> float max_dis(...) from builtins.PyCapsule max_dis(rosetta.core.scoring.etable.Etable) -> float max_dis2(...) from builtins.PyCapsule max_dis2(rosetta.core.scoring.etable.Etable) -> float max_heavy_heavy_cutoff(...) from builtins.PyCapsule max_heavy_heavy_cutoff(rosetta.core.scoring.etable.Etable) -> float max_heavy_hydrogen_cutoff(...) from builtins.PyCapsule max_heavy_hydrogen_cutoff(rosetta.core.scoring.etable.Etable) -> float max_hydrogen_hydrogen_cutoff(...) from builtins.PyCapsule max_hydrogen_hydrogen_cutoff(rosetta.core.scoring.etable.Etable) -> float max_hydrogen_lj_radius(...) from builtins.PyCapsule max_hydrogen_lj_radius(rosetta.core.scoring.etable.Etable) -> float   Returns the maximum lj radius for any hydrogen atom as  defined by the input atom-type-set used to create this Etable. max_non_hydrogen_lj_radius(...) from builtins.PyCapsule max_non_hydrogen_lj_radius(rosetta.core.scoring.etable.Etable) -> float   Returns the maximum lj radius for any non-hydrogen  atom as defined by the atom-type-set used to create this Etable. min_dis(...) from builtins.PyCapsule min_dis(rosetta.core.scoring.etable.Etable) -> float min_dis2(...) from builtins.PyCapsule min_dis2(rosetta.core.scoring.etable.Etable) -> float n_atomtypes(...) from builtins.PyCapsule n_atomtypes(rosetta.core.scoring.etable.Etable) -> int nblist_dis2_cutoff_HH(...) from builtins.PyCapsule nblist_dis2_cutoff_HH(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which any hydrogen/hydrogen pair is guaranteed  to have an interaction energy of zero.  This function is used by the NeighborList nblist_dis2_cutoff_XH(...) from builtins.PyCapsule nblist_dis2_cutoff_XH(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which a hydrogen/heavy-atom pair is  guaranteed to have an interaction energy of zero.  This function is used  by the NeighborList nblist_dis2_cutoff_XX(...) from builtins.PyCapsule nblist_dis2_cutoff_XX(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which any pair of heavy-atoms is  guaranteed to have an interaction energy of zero.  This function is  used by the NeighborList solv1(...) from builtins.PyCapsule solv1(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double> solv2(...) from builtins.PyCapsule solv2(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   class EtableClassicIntraEnergyCreator(rosetta.core.scoring.methods.EnergyMethodCreator)       Method resolution order: EtableClassicIntraEnergyCreator rosetta.core.scoring.methods.EnergyMethodCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableClassicIntraEnergyCreator,  : rosetta.core.scoring.etable.EtableClassicIntraEnergyCreator) -> rosetta.core.scoring.etable.EtableClassicIntraEnergyCreator create_energy_method(...) from builtins.PyCapsule create_energy_method(self : rosetta.core.scoring.etable.EtableClassicIntraEnergyCreator,  : rosetta.core.scoring.methods.EnergyMethodOptions) -> rosetta.core.scoring.methods.EnergyMethod   Instantiate a new EtableEnergy score_types_for_method(...) from builtins.PyCapsule score_types_for_method(rosetta.core.scoring.etable.EtableClassicIntraEnergyCreator) -> rosetta.utility.vector1_core_scoring_ScoreType   Return the set of score types claimed by the EnergyMethod  this EnergyMethodCreator creates in its create_energy_method() function   class EtableEnergyCreator(rosetta.core.scoring.methods.EnergyMethodCreator)       Method resolution order: EtableEnergyCreator rosetta.core.scoring.methods.EnergyMethodCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableEnergyCreator,  : rosetta.core.scoring.etable.EtableEnergyCreator) -> rosetta.core.scoring.etable.EtableEnergyCreator create_energy_method(...) from builtins.PyCapsule create_energy_method(self : rosetta.core.scoring.etable.EtableEnergyCreator,  : rosetta.core.scoring.methods.EnergyMethodOptions) -> rosetta.core.scoring.methods.EnergyMethod   Instantiate a new EtableEnergy score_types_for_method(...) from builtins.PyCapsule score_types_for_method(rosetta.core.scoring.etable.EtableEnergyCreator) -> rosetta.utility.vector1_core_scoring_ScoreType   Return the set of score types claimed by the EnergyMethod  this EnergyMethodCreator creates in its create_energy_method() function   class EtableEvaluator(builtins.object)     ///////////////// Evaluators ///////////////////////////////     Methods defined here: __init__(...) from builtins.PyCapsule __init__(self : rosetta.core.scoring.etable.EtableEvaluator, etable : rosetta.core.scoring.etable.Etable) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableEvaluator,  : rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.etable.EtableEvaluator atom_pair_energy_v(...) from builtins.PyCapsule atom_pair_energy_v(*args, **kwargs) Overloaded function.   1. atom_pair_energy_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atrE : float, repE : float, solE : float, d2 : float) -> NoneType   2. atom_pair_energy_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, d2 : float) -> NoneType atom_pair_lk_energy_and_deriv_v(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v(*args, **kwargs) Overloaded function.   1. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float) -> NoneType   2. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float, eval_deriv : bool) -> NoneType atom_pair_lk_energy_and_deriv_v_efficient(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v_efficient(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, solE2 : float, dsolE1 : float, eval_deriv : bool) -> NoneType atr_weight(...) from builtins.PyCapsule atr_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float eval_dE_dR_over_r_v(...) from builtins.PyCapsule eval_dE_dR_over_r_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weights : rosetta.core.scoring.EMapVector, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> float hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.EtableEvaluator) -> float pair_energy_H_v(...) from builtins.PyCapsule pair_energy_H_v(self : rosetta.core.scoring.etable.EtableEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType rep_weight(...) from builtins.PyCapsule rep_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float set_scoretypes(...) from builtins.PyCapsule set_scoretypes(self : rosetta.core.scoring.etable.EtableEvaluator, st_atr_in : rosetta.core.scoring.ScoreType, st_rep_in : rosetta.core.scoring.ScoreType, st_sol_in : rosetta.core.scoring.ScoreType) -> NoneType set_weights(...) from builtins.PyCapsule set_weights(self : rosetta.core.scoring.etable.EtableEvaluator, weights : rosetta.core.scoring.EMapVector) -> NoneType sol_weight(...) from builtins.PyCapsule sol_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float st_atr(...) from builtins.PyCapsule st_atr(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_rep(...) from builtins.PyCapsule st_rep(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_sol(...) from builtins.PyCapsule st_sol(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType sum_energies(...) from builtins.PyCapsule sum_energies(self : rosetta.core.scoring.etable.EtableEvaluator, atr : float, rep : float, solv : float) -> float   class EtableOptions(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.scoring.etable.EtableOptions) -> NoneType   2. __init__(self : rosetta.core.scoring.etable.EtableOptions, src : rosetta.core.scoring.etable.EtableOptions) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. __str__(...) from builtins.PyCapsule __str__(rosetta.core.scoring.etable.EtableOptions) -> str append_schema_attributes(...) from builtins.PyCapsule append_schema_attributes(attributes : rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableOptions, src : rosetta.core.scoring.etable.EtableOptions) -> rosetta.core.scoring.etable.EtableOptions parse_my_tag(...) from builtins.PyCapsule parse_my_tag(self : rosetta.core.scoring.etable.EtableOptions, tag : rosetta.utility.tag.Tag) -> NoneType Data descriptors defined here: Wradius analytic_etable_evaluation bins_per_A2 enlarge_h_lj_wdepth etable_type lj_hbond_OH_donor_dis lj_hbond_hdis lj_switch_dis2sigma max_dis no_lk_polar_desolvation   class EtableParamsOnePair(builtins.object)     %EtableParamsOnePair describes all of the parameters for a particular pair of atom types necessary to evaluate the Lennard-Jones and LK solvation energies.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(rosetta.core.scoring.etable.EtableParamsOnePair) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. Data descriptors defined here: fasol_cubic_poly1_close fasol_cubic_poly1_close_flat fasol_cubic_poly1_far fasol_cubic_poly2_close fasol_cubic_poly2_close_flat fasol_cubic_poly2_far fasol_cubic_poly_close fasol_cubic_poly_close_end fasol_cubic_poly_close_flat fasol_cubic_poly_close_start fasol_cubic_poly_far fasol_final_weight hydrogen_interaction lj_minimum lj_r12_coeff lj_r6_coeff lj_switch_intercept lj_switch_slope lj_val_at_minimum ljatr_cubic_poly_parameters ljatr_cubic_poly_xhi ljatr_cubic_poly_xlo ljatr_final_weight ljrep_extra_repulsion ljrep_from_negcrossing ljrep_linear_ramp_d2_cutoff lk_coeff1 lk_coeff2 lk_min_dis2sigma_value maxd2   class ExtraQuadraticRepulsion(builtins.object)     the ExtraQuadraticRepulsion class is used to add in extra repulsion for particular atom pairs, if needed, (e.g. for OCbb/OCbb) where the functional form is: fa_rep += (xhi - x)^2 * slope for values of x between xlo and xhi, and fa_rep += (x - xlo ) * extrapolated_slope + ylo where extrapolated slope can be anything, but, to defined a function with continuous derivatives, should be extrapolated_slope = (xhi-xlo)^2*slope.  This is the analytical implementation of the "modify_pot" behavior.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.scoring.etable.ExtraQuadraticRepulsion) -> NoneType   2. __init__(self : rosetta.core.scoring.etable.ExtraQuadraticRepulsion,  : rosetta.core.scoring.etable.ExtraQuadraticRepulsion) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. Data descriptors defined here: extrapolated_slope slope xhi xlo ylo   class MembEtable(Etable)     Table of pre-computed LK membrane solvation energies     Method resolution order: MembEtable Etable builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle, rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t, rosetta.core.scoring.etable.EtableOptions) -> NoneType   doc   2. __init__(self : handle, atom_set_in : rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t, options : rosetta.core.scoring.etable.EtableOptions, alternate_parameter_set : str) -> NoneType   3. __init__(handle, rosetta.core.scoring.etable.MembEtable) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. dsolv1(...) from builtins.PyCapsule dsolv1(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double>   Return the solvation derivative table for the desolvation of atom1 by atom2 dsolv2(...) from builtins.PyCapsule dsolv2(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double>   Return the solvation derivative table that combines atom1 and atom2's desolvations lj_radius(...) from builtins.PyCapsule lj_radius(self : rosetta.core.scoring.etable.MembEtable, i : int) -> float   set these up in the ctor lk_dgfree(...) from builtins.PyCapsule lk_dgfree(self : rosetta.core.scoring.etable.MembEtable, i : int) -> float lk_dgrefce(...) from builtins.PyCapsule lk_dgrefce(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray1D<double> lk_lambda(...) from builtins.PyCapsule lk_lambda(self : rosetta.core.scoring.etable.MembEtable, i : int) -> float lk_volume(...) from builtins.PyCapsule lk_volume(self : rosetta.core.scoring.etable.MembEtable, i : int) -> float max_hydrogen_lj_radius(...) from builtins.PyCapsule max_hydrogen_lj_radius(rosetta.core.scoring.etable.MembEtable) -> float   Returns the maximum lj radius for any hydrogen atom as  defined by the input atom-type-set used to create this Etable. max_non_hydrogen_lj_radius(...) from builtins.PyCapsule max_non_hydrogen_lj_radius(rosetta.core.scoring.etable.MembEtable) -> float   Returns the maximum lj radius for any non-hydrogen  atom as defined by the atom-type-set used to create this Etable. memb_dsolv1(...) from builtins.PyCapsule memb_dsolv1(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double>   Return the solvation derivative table for the desolvation of atom1 by atom2 memb_dsolv2(...) from builtins.PyCapsule memb_dsolv2(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double>   return the solvation derivative table that combines atom1 and atom2's desolvations memb_lk_dgfree(...) from builtins.PyCapsule memb_lk_dgfree(self : rosetta.core.scoring.etable.MembEtable, i : int) -> float memb_lk_dgrefce(...) from builtins.PyCapsule memb_lk_dgrefce(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray1D<double> memb_solv1(...) from builtins.PyCapsule memb_solv1(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double> memb_solv2(...) from builtins.PyCapsule memb_solv2(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double> solv1(...) from builtins.PyCapsule solv1(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double>   Provide Constnat Access to Arrays solv2(...) from builtins.PyCapsule solv2(rosetta.core.scoring.etable.MembEtable) -> ObjexxFCL::FArray3D<double> Methods inherited from Etable: Wradius(...) from builtins.PyCapsule Wradius(rosetta.core.scoring.etable.Etable) -> float add_long_range_damping(...) from builtins.PyCapsule add_long_range_damping(rosetta.core.scoring.etable.Etable) -> bool analytic_etable_derivatives(...) from builtins.PyCapsule analytic_etable_derivatives(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, dljatrE_ddis : float, dljrepE_ddis : float, dfasolE_ddis : float, inv_d : float) -> NoneType   Analytically evaluate the energy derivatives for a pair of atoms analytic_etable_evaluation(...) from builtins.PyCapsule analytic_etable_evaluation(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, lj_atrE : float, lj_repE : float, fa_solE : float, d2 : float) -> NoneType   Use an analytic functional form of the etable to evaluate an atom-pair energy  without reading from the enormous and uncachable tables. analytic_lk_derivatives(...) from builtins.PyCapsule analytic_lk_derivatives(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, dfasolE1_ddis : float, dfasolE2_ddis : float, inv_d : float) -> NoneType   Analytically evaluate the LK solvation derivatives for a pair of atoms, separately  computing the derivative for atom2's desolvation of atom1 (dfasolE1_ddis) and atom1's desolvation  of atom2 (dfasolE2_ddis). analytic_lk_energy(...) from builtins.PyCapsule analytic_lk_energy(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, fa_solE1 : float, fa_solE2 : float) -> NoneType   Use an analytic functional form of the etable to evaluate only the LK atom-pair energy  computing the desolvation of atom1 by atom2 separately from the desolvation of atom2 by atom1. analytic_params_for_pair(...) from builtins.PyCapsule analytic_params_for_pair(self : rosetta.core.scoring.etable.Etable, atype1 : int, atype2 : int) -> rosetta.core.scoring.etable.EtableParamsOnePair atom_set(...) from builtins.PyCapsule atom_set(rosetta.core.scoring.etable.Etable) -> rosetta.std.weak_ptr_const_core_chemical_AtomTypeSet_t atom_type(...) from builtins.PyCapsule atom_type(self : rosetta.core.scoring.etable.Etable, type : int) -> rosetta.core.chemical.AtomType cubic_polynomial_deriv(...) from builtins.PyCapsule cubic_polynomial_deriv(x : float, cp : rosetta.core.scoring.etable.CubicPolynomial) -> float cubic_polynomial_from_spline(...) from builtins.PyCapsule cubic_polynomial_from_spline(xlo : float, xhi : float, sp : rosetta.core.scoring.etable.SplineParameters) -> rosetta.core.scoring.etable.CubicPolynomial dljatr(...) from builtins.PyCapsule dljatr(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   const access to the deriv arrays dljrep(...) from builtins.PyCapsule dljrep(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double> dsolv(...) from builtins.PyCapsule dsolv(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   return the solvation derivative table that combines atom1 and atom2's desolvations epsilon(...) from builtins.PyCapsule epsilon(rosetta.core.scoring.etable.Etable) -> float etable_disbins(...) from builtins.PyCapsule etable_disbins(rosetta.core.scoring.etable.Etable) -> float eval_cubic_polynomial(...) from builtins.PyCapsule eval_cubic_polynomial(x : float, sp : rosetta.core.scoring.etable.CubicPolynomial) -> float fasol_cubic_poly_far_xhi(...) from builtins.PyCapsule fasol_cubic_poly_far_xhi(rosetta.core.scoring.etable.Etable) -> float fasol_cubic_poly_far_xlo(...) from builtins.PyCapsule fasol_cubic_poly_far_xlo(rosetta.core.scoring.etable.Etable) -> float get_bins_per_A2(...) from builtins.PyCapsule get_bins_per_A2(rosetta.core.scoring.etable.Etable) -> int get_lj_hbond_OH_donor_dis(...) from builtins.PyCapsule get_lj_hbond_OH_donor_dis(rosetta.core.scoring.etable.Etable) -> float get_lj_hbond_dis(...) from builtins.PyCapsule get_lj_hbond_dis(rosetta.core.scoring.etable.Etable) -> float get_lj_hbond_hdis(...) from builtins.PyCapsule get_lj_hbond_hdis(rosetta.core.scoring.etable.Etable) -> float get_safe_max_dis2(...) from builtins.PyCapsule get_safe_max_dis2(rosetta.core.scoring.etable.Etable) -> float hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.Etable) -> float interpolated_analytic_etable_evaluation(...) from builtins.PyCapsule interpolated_analytic_etable_evaluation(self : rosetta.core.scoring.etable.Etable, at1 : rosetta.core.conformation.Atom, at2 : rosetta.core.conformation.Atom, lj_atrE : float, lj_repE : float, fa_solE : float, d2 : float) -> NoneType   Use the analytic_etable_evaluation function to evaluate the energy  of two atoms, but  evaluate the function at the old grid points and then  interpolate between them the way the existing etable does (in square  distance space). Useful for comparing the original etable evaluation with the  analytic evaluation. lj_slope_intercept(...) from builtins.PyCapsule lj_slope_intercept(rosetta.core.scoring.etable.Etable) -> float lj_switch_dis2sigma(...) from builtins.PyCapsule lj_switch_dis2sigma(rosetta.core.scoring.etable.Etable) -> float lj_use_hbond_radii(...) from builtins.PyCapsule lj_use_hbond_radii(rosetta.core.scoring.etable.Etable) -> bool lj_use_lj_deriv_slope(...) from builtins.PyCapsule lj_use_lj_deriv_slope(rosetta.core.scoring.etable.Etable) -> bool lj_use_water_radii(...) from builtins.PyCapsule lj_use_water_radii(rosetta.core.scoring.etable.Etable) -> bool lj_water_dis(...) from builtins.PyCapsule lj_water_dis(rosetta.core.scoring.etable.Etable) -> float lj_water_hdis(...) from builtins.PyCapsule lj_water_hdis(rosetta.core.scoring.etable.Etable) -> float lj_wdepth(...) from builtins.PyCapsule lj_wdepth(self : rosetta.core.scoring.etable.Etable, i : int) -> float   Return the Lennard-Jones well depth for an atom ljatr(...) from builtins.PyCapsule ljatr(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double>   const access to the arrays ljrep(...) from builtins.PyCapsule ljrep(rosetta.core.scoring.etable.Etable) -> ObjexxFCL::FArray3D<double> lk_inv_lambda2(...) from builtins.PyCapsule lk_inv_lambda2(self : rosetta.core.scoring.etable.Etable, i : int) -> float lk_min_dis2sigma(...) from builtins.PyCapsule lk_min_dis2sigma(rosetta.core.scoring.etable.Etable) -> float long_range_damping_length(...) from builtins.PyCapsule long_range_damping_length(rosetta.core.scoring.etable.Etable) -> float max_dis(...) from builtins.PyCapsule max_dis(rosetta.core.scoring.etable.Etable) -> float max_dis2(...) from builtins.PyCapsule max_dis2(rosetta.core.scoring.etable.Etable) -> float max_heavy_heavy_cutoff(...) from builtins.PyCapsule max_heavy_heavy_cutoff(rosetta.core.scoring.etable.Etable) -> float max_heavy_hydrogen_cutoff(...) from builtins.PyCapsule max_heavy_hydrogen_cutoff(rosetta.core.scoring.etable.Etable) -> float max_hydrogen_hydrogen_cutoff(...) from builtins.PyCapsule max_hydrogen_hydrogen_cutoff(rosetta.core.scoring.etable.Etable) -> float min_dis(...) from builtins.PyCapsule min_dis(rosetta.core.scoring.etable.Etable) -> float min_dis2(...) from builtins.PyCapsule min_dis2(rosetta.core.scoring.etable.Etable) -> float n_atomtypes(...) from builtins.PyCapsule n_atomtypes(rosetta.core.scoring.etable.Etable) -> int nblist_dis2_cutoff_HH(...) from builtins.PyCapsule nblist_dis2_cutoff_HH(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which any hydrogen/hydrogen pair is guaranteed  to have an interaction energy of zero.  This function is used by the NeighborList nblist_dis2_cutoff_XH(...) from builtins.PyCapsule nblist_dis2_cutoff_XH(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which a hydrogen/heavy-atom pair is  guaranteed to have an interaction energy of zero.  This function is used  by the NeighborList nblist_dis2_cutoff_XX(...) from builtins.PyCapsule nblist_dis2_cutoff_XX(rosetta.core.scoring.etable.Etable) -> float   The distance cutoff beyond which any pair of heavy-atoms is  guaranteed to have an interaction energy of zero.  This function is  used by the NeighborList   class SplineParameters(builtins.object)     %SplineParameters is a simple struct for holding the cubic spline polynomials used in the etable to interpolate the lennard-jones attractive and LK-solvation terms to zero smoothly.  These splines have exactly two knots to represent them, and the same x values are used for all the knots: thus the only parameters needed are the y values at the knots, and the second-derivatives for the polynomials at knots.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(rosetta.core.scoring.etable.SplineParameters) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. Data descriptors defined here: y2hi y2lo yhi ylo   class TableLookupEtableEnergy(BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t)       Method resolution order: TableLookupEtableEnergy BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy rosetta.core.scoring.methods.TwoBodyEnergy rosetta.core.scoring.methods.EnergyMethod builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle, rosetta.core.scoring.etable.Etable, rosetta.core.scoring.methods.EnergyMethodOptions) -> NoneType   doc   2. __init__(self : handle, etable_in : rosetta.core.scoring.etable.Etable, options : rosetta.core.scoring.methods.EnergyMethodOptions, do_classic_intrares : bool) -> NoneType   3. __init__(handle, rosetta.core.scoring.etable.TableLookupEtableEnergy) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. clone(...) from builtins.PyCapsule clone(rosetta.core.scoring.etable.TableLookupEtableEnergy) -> rosetta.core.scoring.methods.EnergyMethod   clone defines_intrares_energy(...) from builtins.PyCapsule defines_intrares_energy(self : rosetta.core.scoring.etable.TableLookupEtableEnergy,  : rosetta.core.scoring.EMapVector) -> bool   ////////////////////////////////////////////////////////////////////////// eval_intrares_energy(...) from builtins.PyCapsule eval_intrares_energy(self : rosetta.core.scoring.etable.TableLookupEtableEnergy, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType interres_evaluator(...) from builtins.PyCapsule interres_evaluator(*args, **kwargs) Overloaded function.   1. interres_evaluator(rosetta.core.scoring.etable.TableLookupEtableEnergy) -> rosetta.core.scoring.etable.TableLookupEvaluator   2. interres_evaluator(rosetta.core.scoring.etable.TableLookupEtableEnergy) -> rosetta.core.scoring.etable.TableLookupEvaluator intrares_evaluator(...) from builtins.PyCapsule intrares_evaluator(*args, **kwargs) Overloaded function.   1. intrares_evaluator(rosetta.core.scoring.etable.TableLookupEtableEnergy) -> rosetta.core.scoring.etable.TableLookupEvaluator   2. intrares_evaluator(rosetta.core.scoring.etable.TableLookupEtableEnergy) -> rosetta.core.scoring.etable.TableLookupEvaluator setup_for_scoring_(...) from builtins.PyCapsule setup_for_scoring_(self : rosetta.core.scoring.etable.TableLookupEtableEnergy, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType Methods inherited from BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t: assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy,  : rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, dsq : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, bb : float, dsq : float) -> NoneType   3. atom_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, ape : rosetta.core.scoring.etable.AtomPairEnergy) -> NoneType atomic_interaction_cutoff(...) from builtins.PyCapsule atomic_interaction_cutoff(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> float backbone_backbone_energy(...) from builtins.PyCapsule backbone_backbone_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType backbone_sidechain_energy(...) from builtins.PyCapsule backbone_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_backbone(...) from builtins.PyCapsule bump_energy_backbone(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType bump_energy_full(...) from builtins.PyCapsule bump_energy_full(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType calculate_interres(...) from builtins.PyCapsule calculate_interres(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue) -> bool calculate_intrares(...) from builtins.PyCapsule calculate_intrares(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue) -> bool divides_backbone_and_sidechain_energetics(...) from builtins.PyCapsule divides_backbone_and_sidechain_energetics(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool eval_atom_derivative(...) from builtins.PyCapsule eval_atom_derivative(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, id : rosetta.core.id.AtomID, pose : rosetta.core.pose.Pose,  : ObjexxFCL::FArray1D<int>, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, F1 : rosetta.numeric.xyzVector_double_t, F2 : rosetta.numeric.xyzVector_double_t) -> NoneType eval_intrares_derivatives(...) from builtins.PyCapsule eval_intrares_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, atom_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType eval_intrares_energy_ext(...) from builtins.PyCapsule eval_intrares_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType eval_residue_pair_derivatives(...) from builtins.PyCapsule eval_residue_pair_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue,  : rosetta.core.scoring.ResSingleMinimizationData,  : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, weights : rosetta.core.scoring.EMapVector, r1_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair, r2_at_derivs : rosetta.utility.vector1_core_scoring_DerivVectorPair) -> NoneType evaluate_rotamer_background_energies(...) from builtins.PyCapsule evaluate_rotamer_background_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_vector : rosetta.utility.vector1_float) -> NoneType evaluate_rotamer_pair_energies(...) from builtins.PyCapsule evaluate_rotamer_pair_energies(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, set1 : rosetta.core.conformation.RotamerSetBase, set2 : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, energy_table : ObjexxFCL::FArray2D<float>) -> NoneType finalize_total_energy(...) from builtins.PyCapsule finalize_total_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, totals : rosetta.core.scoring.EMapVector) -> NoneType get_count_pair_function(...) from builtins.PyCapsule get_count_pair_function(*args, **kwargs) Overloaded function.   1. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction   2. get_count_pair_function(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction get_intrares_countpair(...) from builtins.PyCapsule get_intrares_countpair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction) -> rosetta.core.scoring.etable.count_pair.CountPairFunction hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> float indicate_required_context_graphs(...) from builtins.PyCapsule indicate_required_context_graphs(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.utility.vector1_bool) -> NoneType method_type(...) from builtins.PyCapsule method_type(rosetta.core.scoring.methods.ContextIndependentTwoBodyEnergy) -> rosetta.core.scoring.methods.EnergyMethodType min_pair_data_type(...) from builtins.PyCapsule min_pair_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.min_pair_data min_single_data_type(...) from builtins.PyCapsule min_single_data_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.min_single_data minimize_in_whole_structure_context(...) from builtins.PyCapsule minimize_in_whole_structure_context(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.core.pose.Pose) -> bool nblist_type(...) from builtins.PyCapsule nblist_type(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> rosetta.core.scoring.EnergiesCacheableDataType.Enum pair_energy_H(...) from builtins.PyCapsule pair_energy_H(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType prepare_for_residue_pair(...) from builtins.PyCapsule prepare_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, res1 : int, res2 : int, pose : rosetta.core.pose.Pose) -> NoneType prepare_rotamers_for_packing(...) from builtins.PyCapsule prepare_rotamers_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, set : rosetta.core.conformation.RotamerSetBase) -> NoneType requires_a_setup_for_derivatives_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_derivatives_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_derivatives_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool requires_a_setup_for_scoring_for_residue_pair_opportunity(...) from builtins.PyCapsule requires_a_setup_for_scoring_for_residue_pair_opportunity(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose) -> bool residue_pair_energy(...) from builtins.PyCapsule residue_pair_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_pair_energy_ext(...) from builtins.PyCapsule residue_pair_energy_ext(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResPairMinimizationData, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType setup_for_derivatives(...) from builtins.PyCapsule setup_for_derivatives(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_derivatives_for_residue(...) from builtins.PyCapsule setup_for_derivatives_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_derivatives_for_residue_pair(...) from builtins.PyCapsule setup_for_derivatives_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_minimizing(...) from builtins.PyCapsule setup_for_minimizing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, min_map : rosetta.core.kinematics.MinimizerMapBase) -> NoneType setup_for_minimizing_for_residue(...) from builtins.PyCapsule setup_for_minimizing_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_minimizing_for_residue_pair(...) from builtins.PyCapsule setup_for_minimizing_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, minmap : rosetta.core.kinematics.MinimizerMapBase, res1_data_cache : rosetta.core.scoring.ResSingleMinimizationData, res2_data_cache : rosetta.core.scoring.ResSingleMinimizationData, min_data : rosetta.core.scoring.ResPairMinimizationData) -> NoneType setup_for_packing(...) from builtins.PyCapsule setup_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t,  : rosetta.core.pose.Pose,  : rosetta.utility.vector1_bool,  : rosetta.utility.vector1_bool) -> NoneType setup_for_scoring(...) from builtins.PyCapsule setup_for_scoring(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, scfxn : rosetta.core.scoring.ScoreFunction) -> NoneType setup_for_scoring_for_residue(...) from builtins.PyCapsule setup_for_scoring_for_residue(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, min_data : rosetta.core.scoring.ResSingleMinimizationData) -> NoneType setup_for_scoring_for_residue_pair(...) from builtins.PyCapsule setup_for_scoring_for_residue_pair(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, minsingle_data1 : rosetta.core.scoring.ResSingleMinimizationData, minsingle_data2 : rosetta.core.scoring.ResSingleMinimizationData, pose : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction, data_cache : rosetta.core.scoring.ResPairMinimizationData) -> NoneType sidechain_sidechain_energy(...) from builtins.PyCapsule sidechain_sidechain_energy(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType update_residue_for_packing(...) from builtins.PyCapsule update_residue_for_packing(self : rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t, pose : rosetta.core.pose.Pose, resid : int) -> NoneType use_extended_intrares_energy_interface(...) from builtins.PyCapsule use_extended_intrares_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool use_extended_residue_pair_energy_interface(...) from builtins.PyCapsule use_extended_residue_pair_energy_interface(rosetta.core.scoring.etable.BaseEtableEnergy_core_scoring_etable_TableLookupEtableEnergy_t) -> bool Methods inherited from rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy: evaluate_rotamer_background_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_background_energy_maps(self : rosetta.core.scoring.methods.ShortRangeTwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, residue : rosetta.core.conformation.Residue, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer/background energies.  Need not be overriden  in derived class -- by default, iterates over all rotamers in the set, and calls  derived class's residue_pair_energy method for each one against the background rotamer  Since short range rotamer pairs may not need calculation, the default method  looks at blocks of residue type pairs and only calls the residue_pair_energy method  if the rotamer pairs are within range Methods inherited from rosetta.core.scoring.methods.TwoBodyEnergy: defines_intrares_dof_derivatives(...) from builtins.PyCapsule defines_intrares_dof_derivatives(self : rosetta.core.scoring.methods.TwoBodyEnergy, p : rosetta.core.pose.Pose) -> bool   Use the dof_derivative interface for this energy method when  calculating derivatives?  It is possible to define both dof_derivatives and  atom-derivatives; they are not mutually exclusive. defines_intrares_energy_for_residue(...) from builtins.PyCapsule defines_intrares_energy_for_residue(self : rosetta.core.scoring.methods.TwoBodyEnergy, res : rosetta.core.conformation.Residue) -> bool   If a score function defines no intra-residue scores for a particular  residue, then it may opt-out of being asked during minimization to evaluate  the score for this residue. defines_score_for_residue_pair(...) from builtins.PyCapsule defines_score_for_residue_pair(self : rosetta.core.scoring.methods.TwoBodyEnergy, res1 : rosetta.core.conformation.Residue, res2 : rosetta.core.conformation.Residue, res_moving_wrt_eachother : bool) -> bool   During minimization, energy methods are allowed to decide that they say nothing  about a particular residue pair (e.g. no non-zero energy) and as a result they will not be queried for  a derivative or an energy.  The default implementation returns "true" for all residue pairs.  Context-dependent two-body energies have the option of behaving as if they are context-independent  by returning "false" for residue pairs that do no move wrt each other. eval_intraresidue_dof_derivative(...) from builtins.PyCapsule eval_intraresidue_dof_derivative(self : rosetta.core.scoring.methods.TwoBodyEnergy, rsd : rosetta.core.conformation.Residue, min_data : rosetta.core.scoring.ResSingleMinimizationData, dof_id : rosetta.core.id.DOF_ID, torsion_id : rosetta.core.id.TorsionID, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, weights : rosetta.core.scoring.EMapVector) -> float   Evaluate the DOF derivative for a particular residue.  The Pose merely serves as context,  and the input residue is not required to be a member of the Pose. evaluate_rotamer_intrares_energies(...) from builtins.PyCapsule evaluate_rotamer_intrares_energies(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, energies : rosetta.utility.vector1_float) -> NoneType   Batch computation of rotamer intrares energies.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. evaluate_rotamer_intrares_energy_maps(...) from builtins.PyCapsule evaluate_rotamer_intrares_energy_maps(self : rosetta.core.scoring.methods.TwoBodyEnergy, set : rosetta.core.conformation.RotamerSetBase, pose : rosetta.core.pose.Pose, sfxn : rosetta.core.scoring.ScoreFunction, emaps : rosetta.utility.vector1_core_scoring_EMapVector) -> NoneType   Batch computation of rotamer intrares energy map.  Need not be overriden in  derived class -- by default, iterates over all rotamers,  and calls derived class's intrares _energy method. Methods inherited from rosetta.core.scoring.methods.EnergyMethod: defines_high_order_terms(...) from builtins.PyCapsule defines_high_order_terms(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose) -> bool   Should this EnergyMethod have score and derivative evaluation  evaluated both in the context of the whole Pose and in the context  of residue or residue-pairs?  This covers scoring terms like env-smooth  wherein the CBeta's get derivatives for increasing the neighbor counts  for surrounding residues, and terms like constraints, which are definable  on arbitrary number of residues (e.g. more than 2); both of these terms  could be used in RTMin, and both should use the residue and residue-pair  evaluation scheme with the MinimizationGraph for the majority of the  work they do.  (Now, high-order constraints (3-body or above) will not  be properly evaluated within RTMin.).  The default implementation  returns "false". finalize_after_derivatives(...) from builtins.PyCapsule finalize_after_derivatives(self : rosetta.core.scoring.methods.EnergyMethod,  : rosetta.core.pose.Pose,  : rosetta.core.scoring.ScoreFunction) -> NoneType   called at the end of derivatives evaluation score_types(...) from builtins.PyCapsule score_types(rosetta.core.scoring.methods.EnergyMethod) -> rosetta.utility.vector1_core_scoring_ScoreType   Returns the score types that this energy method computes. version(...) from builtins.PyCapsule version(rosetta.core.scoring.methods.EnergyMethod) -> int   Return the version of the energy method   class TableLookupEvaluator(EtableEvaluator)       Method resolution order: TableLookupEvaluator EtableEvaluator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(self : handle, etable_in : rosetta.core.scoring.etable.Etable) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. atom_pair_energy(...) from builtins.PyCapsule atom_pair_energy(*args, **kwargs) Overloaded function.   1. atom_pair_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, d2 : float) -> NoneType   2. atom_pair_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float, d2 : float) -> NoneType atom_pair_energy_v(...) from builtins.PyCapsule atom_pair_energy_v(*args, **kwargs) Overloaded function.   1. atom_pair_energy_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector, d2 : float) -> NoneType   2. atom_pair_energy_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atrE : float, repE : float, solE : float, d2 : float) -> NoneType atom_pair_lk_energy_and_deriv_v(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v(*args, **kwargs) Overloaded function.   1. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float) -> NoneType   2. atom_pair_lk_energy_and_deriv_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, dsolE1 : float, eval_deriv : bool) -> NoneType atom_pair_lk_energy_and_deriv_v_efficient(...) from builtins.PyCapsule atom_pair_lk_energy_and_deriv_v_efficient(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, solE1 : float, solE2 : float, dsolE1 : float, eval_deriv : bool) -> NoneType eval_dE_dR_over_r(...) from builtins.PyCapsule eval_dE_dR_over_r(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weights : rosetta.core.scoring.EMapVector, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> float eval_dE_dR_over_r_v(...) from builtins.PyCapsule eval_dE_dR_over_r_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weights : rosetta.core.scoring.EMapVector, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> float heavyatom_heavyatom_energy(...) from builtins.PyCapsule heavyatom_heavyatom_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom, d2 : float,  : int) -> float   Inline Methods For Trie-vs-Trie Algorithm heavyatom_hydrogenatom_energy(...) from builtins.PyCapsule heavyatom_hydrogenatom_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float hydrogenatom_heavyatom_energy(...) from builtins.PyCapsule hydrogenatom_heavyatom_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float hydrogenatom_hydrogenatom_energy(...) from builtins.PyCapsule hydrogenatom_hydrogenatom_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, at1 : rosetta.core.scoring.etable.etrie.EtableAtom, at2 : rosetta.core.scoring.etable.etrie.EtableAtom,  : int) -> float pair_energy_H(...) from builtins.PyCapsule pair_energy_H(*args, **kwargs) Overloaded function.   1. pair_energy_H(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType   2. pair_energy_H(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, atr : float, rep : float, solv : float) -> NoneType pair_energy_H_v(...) from builtins.PyCapsule pair_energy_H_v(self : rosetta.core.scoring.etable.TableLookupEvaluator, atom1 : rosetta.core.conformation.Atom, atom2 : rosetta.core.conformation.Atom, weight : float, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy(...) from builtins.PyCapsule residue_atom_pair_energy(self : rosetta.core.scoring.etable.TableLookupEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType   Atom pair energy inline type resolution functions residue_atom_pair_energy_backbone_backbone(...) from builtins.PyCapsule residue_atom_pair_energy_backbone_backbone(self : rosetta.core.scoring.etable.TableLookupEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_backbone(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_backbone(self : rosetta.core.scoring.etable.TableLookupEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_sidechain(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_sidechain(self : rosetta.core.scoring.etable.TableLookupEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType residue_atom_pair_energy_sidechain_whole(...) from builtins.PyCapsule residue_atom_pair_energy_sidechain_whole(self : rosetta.core.scoring.etable.TableLookupEvaluator, rsd1 : rosetta.core.conformation.Residue, rsd2 : rosetta.core.conformation.Residue, cp : rosetta.core.scoring.etable.count_pair.CountPairFunction, emap : rosetta.core.scoring.EMapVector) -> NoneType trie_vs_path(...) from builtins.PyCapsule trie_vs_path(self : rosetta.core.scoring.etable.TableLookupEvaluator, trie1 : rosetta.core.scoring.trie.RotamerTrieBase, trie2 : rosetta.core.scoring.trie.RotamerTrieBase, cp : rosetta.core.scoring.trie.TrieCountPairBase, pair_energy_vector : rosetta.utility.vector1_float, temp_vector : rosetta.utility.vector1_float) -> NoneType trie_vs_trie(...) from builtins.PyCapsule trie_vs_trie(self : rosetta.core.scoring.etable.TableLookupEvaluator, trie1 : rosetta.core.scoring.trie.RotamerTrieBase, trie2 : rosetta.core.scoring.trie.RotamerTrieBase, cp : rosetta.core.scoring.trie.TrieCountPairBase, pair_energy_table : ObjexxFCL::FArray2D<float>, temp_table : ObjexxFCL::FArray2D<float>) -> NoneType   Trie vs trie / trie vs path type resolution functions Methods inherited from EtableEvaluator: assign(...) from builtins.PyCapsule assign(self : rosetta.core.scoring.etable.EtableEvaluator,  : rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.etable.EtableEvaluator atr_weight(...) from builtins.PyCapsule atr_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float hydrogen_interaction_cutoff2(...) from builtins.PyCapsule hydrogen_interaction_cutoff2(rosetta.core.scoring.etable.EtableEvaluator) -> float rep_weight(...) from builtins.PyCapsule rep_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float set_scoretypes(...) from builtins.PyCapsule set_scoretypes(self : rosetta.core.scoring.etable.EtableEvaluator, st_atr_in : rosetta.core.scoring.ScoreType, st_rep_in : rosetta.core.scoring.ScoreType, st_sol_in : rosetta.core.scoring.ScoreType) -> NoneType set_weights(...) from builtins.PyCapsule set_weights(self : rosetta.core.scoring.etable.EtableEvaluator, weights : rosetta.core.scoring.EMapVector) -> NoneType sol_weight(...) from builtins.PyCapsule sol_weight(rosetta.core.scoring.etable.EtableEvaluator) -> float st_atr(...) from builtins.PyCapsule st_atr(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_rep(...) from builtins.PyCapsule st_rep(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType st_sol(...) from builtins.PyCapsule st_sol(rosetta.core.scoring.etable.EtableEvaluator) -> rosetta.core.scoring.ScoreType sum_energies(...) from builtins.PyCapsule sum_energies(self : rosetta.core.scoring.etable.EtableEvaluator, atr : float, rep : float, solv : float) -> float