Package rosetta :: Package protocols :: Package toolbox :: Package sample_around :: Module _protocols_toolbox_sample_around_
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Module _protocols_toolbox_sample_around_

Functions [hide private]
 
add_another_virtual_res(...)
add_another_virtual_res( (Pose)pose) -> None : protocols/toolbox/sample_around/util.hh:32
 
add_virtual_res(...)
add_virtual_res( (Pose)pose [, (bool)set_res_as_root=True]) -> None : protocols/toolbox/sample_around/util.hh:29
 
centroid_dist(...)
centroid_dist( (Pose)pose [, (bool)sample_another_adenosine=False]) -> float : protocols/toolbox/sample_around/util.hh:42
 
do_scoring(...)
do_scoring( (Pose)pose, (__CPP_ScoreFunction__)scorefxn, (bool)sample_rotations, (int)probe_jump_num) -> float : protocols/toolbox/sample_around/util.hh:51
 
do_xy_scan(...)
do_xy_scan( (Pose)pose, (__CPP_ScoreFunction__)scorefxn, (str)outfile, (float)z, (int)probe_jump_num, (float)box_bins, (float)translation_increment, (bool)sample_rotations) -> None : protocols/toolbox/sample_around/util.hh:61
 
rotate_into_nucleobase_frame(...)
rotate_into_nucleobase_frame( (Pose)pose) -> None : protocols/toolbox/sample_around/util.hh:35
 
rotate_into_phosphate_frame(...)
rotate_into_phosphate_frame( (Pose)pose, (int)n, (bool)center_on_OP2) -> None : protocols/toolbox/sample_around/util.hh:38
 
sample_all_rotations_at_jump(...)
sample_all_rotations_at_jump( (Pose)pose, (int)num_jump [, (__CPP_ScoreFunction__)scorefxn=0]) -> float : protocols/toolbox/sample_around/util.hh:45
Variables [hide private]
  __package__ = None
Function Details [hide private]

add_another_virtual_res(...)

 

add_another_virtual_res( (Pose)pose) -> None :
    protocols/toolbox/sample_around/util.hh:32

    C++ signature :
        void add_another_virtual_res(core::pose::Pose {lvalue})

add_virtual_res(...)

 

add_virtual_res( (Pose)pose [, (bool)set_res_as_root=True]) -> None :
    protocols/toolbox/sample_around/util.hh:29

    C++ signature :
        void add_virtual_res(core::pose::Pose {lvalue} [,bool=True])

centroid_dist(...)

 

centroid_dist( (Pose)pose [, (bool)sample_another_adenosine=False]) -> float :
    protocols/toolbox/sample_around/util.hh:42

    C++ signature :
        double centroid_dist(core::pose::Pose {lvalue} [,bool=False])

do_scoring(...)

 

do_scoring( (Pose)pose, (__CPP_ScoreFunction__)scorefxn, (bool)sample_rotations, (int)probe_jump_num) -> float :
    protocols/toolbox/sample_around/util.hh:51

    C++ signature :
        double do_scoring(core::pose::Pose {lvalue},boost::shared_ptr<core::scoring::ScoreFunction>,bool,unsigned long)

do_xy_scan(...)

 

do_xy_scan( (Pose)pose, (__CPP_ScoreFunction__)scorefxn, (str)outfile, (float)z, (int)probe_jump_num, (float)box_bins, (float)translation_increment, (bool)sample_rotations) -> None :
    protocols/toolbox/sample_around/util.hh:61

    C++ signature :
        void do_xy_scan(core::pose::Pose {lvalue},boost::shared_ptr<core::scoring::ScoreFunction>,std::string,double,unsigned long,double,double,bool)

rotate_into_nucleobase_frame(...)

 

rotate_into_nucleobase_frame( (Pose)pose) -> None :
    protocols/toolbox/sample_around/util.hh:35

    C++ signature :
        void rotate_into_nucleobase_frame(core::pose::Pose {lvalue})

rotate_into_phosphate_frame(...)

 

rotate_into_phosphate_frame( (Pose)pose, (int)n, (bool)center_on_OP2) -> None :
    protocols/toolbox/sample_around/util.hh:38

    C++ signature :
        void rotate_into_phosphate_frame(core::pose::Pose {lvalue},unsigned long,bool)

sample_all_rotations_at_jump(...)

 

sample_all_rotations_at_jump( (Pose)pose, (int)num_jump [, (__CPP_ScoreFunction__)scorefxn=0]) -> float :
    protocols/toolbox/sample_around/util.hh:45

    C++ signature :
        double sample_all_rotations_at_jump(core::pose::Pose {lvalue},unsigned long [,boost::shared_ptr<core::scoring::ScoreFunction>=0])