Package rosetta :: Package protocols :: Package stepwise :: Package sampler :: Package rna :: Module _protocols_stepwise_sampler_rna_
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Module _protocols_stepwise_sampler_rna_

Classes [hide private]
  RNA_ChiStepWiseSampler
protocols/stepwise/sampler/rna/RNA_ChiStepWiseSampler.hh:34
  RNA_ChiStepWiseSamplerAP
  RNA_ChiStepWiseSamplerCAP
  RNA_KIC_Sampler
protocols/stepwise/sampler/rna/RNA_KIC_Sampler.hh:42
  RNA_KIC_SamplerAP
  RNA_KIC_SamplerCAP
  RNA_KinematicCloser
The RNA de novo structure modeling protocol
  RNA_KinematicCloserAP
  RNA_KinematicCloserCAP
  RNA_MC_MultiSuite
protocols/stepwise/sampler/rna/RNA_MC_MultiSuite.hh:32
  RNA_MC_MultiSuiteAP
  RNA_MC_MultiSuiteCAP
  RNA_MC_Sugar
protocols/stepwise/sampler/rna/RNA_MC_Sugar.hh:32
  RNA_MC_SugarAP
  RNA_MC_SugarCAP
  RNA_MC_Suite
protocols/stepwise/sampler/rna/RNA_MC_Suite.hh:45
  RNA_MC_SuiteAP
  RNA_MC_SuiteCAP
  RNA_NucleosideStepWiseSampler
protocols/stepwise/sampler/rna/RNA_NucleosideStepWiseSampler.hh:34
  RNA_NucleosideStepWiseSamplerAP
  RNA_NucleosideStepWiseSamplerCAP
  RNA_SugarStepWiseSampler
protocols/stepwise/sampler/rna/RNA_SugarStepWiseSampler.hh:32
  RNA_SugarStepWiseSamplerAP
  RNA_SugarStepWiseSamplerCAP
  RNA_SuiteStepWiseSampler
protocols/stepwise/sampler/rna/RNA_SuiteStepWiseSampler.hh:34
  RNA_SuiteStepWiseSamplerAP
  RNA_SuiteStepWiseSamplerCAP
  __CPP_RNA_ChiStepWiseSampler__
  __CPP_RNA_KIC_Sampler__
  __CPP_RNA_KinematicCloser__
  __CPP_RNA_MC_MultiSuite__
  __CPP_RNA_MC_Sugar__
  __CPP_RNA_MC_Suite__
  __CPP_RNA_NucleosideStepWiseSampler__
  __CPP_RNA_SugarStepWiseSampler__
  __CPP_RNA_SuiteStepWiseSampler__
Functions [hide private]
 
modeler_sugar_at_five_prime(...)
modeler_sugar_at_five_prime( (Pose)pose, (int)moving_suite) -> bool : protocols/stepwise/sampler/rna/util.hh:42
 
modeler_sugar_at_three_prime(...)
modeler_sugar_at_three_prime( (Pose)pose, (int)moving_suite) -> bool : protocols/stepwise/sampler/rna/util.hh:47
 
setup_sampler(...)
setup_sampler( (Pose)pose, (StepWiseModelerOptions)options, (__CPP_StepWiseWorkingParameters__)working_parameters, (bool)build_pose_from_scratch, (bool)kic_modeler, (bool)close_chain) -> StepWiseSamplerBase : protocols/stepwise/sampler/rna/util.hh:38
Variables [hide private]
  __package__ = None
Function Details [hide private]

modeler_sugar_at_five_prime(...)

 

modeler_sugar_at_five_prime( (Pose)pose, (int)moving_suite) -> bool :
    protocols/stepwise/sampler/rna/util.hh:42

    C++ signature :
        bool modeler_sugar_at_five_prime(core::pose::Pose,unsigned long)

modeler_sugar_at_three_prime(...)

 

modeler_sugar_at_three_prime( (Pose)pose, (int)moving_suite) -> bool :
    protocols/stepwise/sampler/rna/util.hh:47

    C++ signature :
        bool modeler_sugar_at_three_prime(core::pose::Pose,unsigned long)

setup_sampler(...)

 

setup_sampler( (Pose)pose, (StepWiseModelerOptions)options, (__CPP_StepWiseWorkingParameters__)working_parameters, (bool)build_pose_from_scratch, (bool)kic_modeler, (bool)close_chain) -> StepWiseSamplerBase :
    protocols/stepwise/sampler/rna/util.hh:38

    C++ signature :
        boost::shared_ptr<protocols::stepwise::sampler::StepWiseSamplerBase> setup_sampler(core::pose::Pose,boost::shared_ptr<protocols::stepwise::modeler::options::StepWiseModelerOptions const>,boost::shared_ptr<protocols::stepwise::modeler::working_parameters::StepWiseWorkingParameters const>,bool,bool,bool)