Package rosetta :: Package protocols :: Package rotamer_recovery :: Module _protocols_rotamer_recovery_

Module _protocols_rotamer_recovery_

Classes

OutputLevel
protocols/rotamer_recovery/RRReporterSQLite.hh:39

PerNativeRRReporterHuman
protocols/rotamer_recovery/RRReporterHuman.hh:66

RRComparer
The comparison functionality for the rotamer recovery test Besides implementing the interface given in the base class RRComparer each RRComparer should have an entry in the conevience RotamerRecovery constructor so its use can be indicated by name.

RRComparerAP

RRComparerAutomorphicRMSD
protocols/rotamer_recovery/RRComparerAutomorphicRMSD.hh:37

RRComparerAutomorphicRMSDAP

RRComparerAutomorphicRMSDCAP

RRComparerAutomorphicRMSDCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:119

RRComparerAutomorphicRMSDCreatorAP

RRComparerAutomorphicRMSDCreatorCAP

RRComparerCAP

RRComparerChiDiff
protocols/rotamer_recovery/RRComparer.hh:120

RRComparerChiDiffAP

RRComparerChiDiffCAP

RRComparerChiDiffCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:137

RRComparerChiDiffCreatorAP

RRComparerChiDiffCreatorCAP

RRComparerCreator
The Creator class is responsible for creating a particular mover class.

RRComparerCreatorAP

RRComparerCreatorCAP

RRComparerElecDensDiff
protocols/rotamer_recovery/RRComparerElecDensDiff.hh:37

RRComparerElecDensDiffAP

RRComparerElecDensDiffCAP

RRComparerElecDensDiffCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:146

RRComparerElecDensDiffCreatorAP

RRComparerElecDensDiffCreatorCAP

RRComparerRotBins
protocols/rotamer_recovery/RRComparer.hh:79

RRComparerRotBinsAP

RRComparerRotBinsCAP

RRComparerRotBinsCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:128

RRComparerRotBinsCreatorAP

RRComparerRotBinsCreatorCAP

RRProtocol
The protocol to run to compute the rotamer recovery the rotamer recovery test Besides implementing the interface given in the base class RRProtocol each RRProtocol should have an entry in the convenience RotamerRecovery constructor so its use can be indicated by name.

RRProtocolAP

RRProtocolCAP

RRProtocolCreator
The Creator class is responsible for creating a particular mover class.

RRProtocolCreatorAP

RRProtocolCreatorCAP

RRProtocolMinPack
protocols/rotamer_recovery/RRProtocolMinPack.hh:34

RRProtocolMinPackAP

RRProtocolMinPackCAP

RRProtocolMinPackCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:71

RRProtocolMinPackCreatorAP

RRProtocolMinPackCreatorCAP

RRProtocolMover
protocols/rotamer_recovery/RRProtocolMover.hh:38

RRProtocolMoverAP

RRProtocolMoverCAP

RRProtocolMoverCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:98

RRProtocolMoverCreatorAP

RRProtocolMoverCreatorCAP

RRProtocolPackRotamers
protocols/rotamer_recovery/RRProtocolPackRotamers.hh:34

RRProtocolPackRotamersAP

RRProtocolPackRotamersCAP

RRProtocolPackRotamersCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:80

RRProtocolPackRotamersCreatorAP

RRProtocolPackRotamersCreatorCAP

RRProtocolRTMin
protocols/rotamer_recovery/RRProtocolRTMin.hh:33

RRProtocolRTMinAP

RRProtocolRTMinCAP

RRProtocolRTMinCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:53

RRProtocolRTMinCreatorAP

RRProtocolRTMinCreatorCAP

RRProtocolReferenceStructure
protocols/rotamer_recovery/RRProtocolReferenceStructure.hh:37

RRProtocolReferenceStructureAP

RRProtocolReferenceStructureCAP

RRProtocolReferenceStructureCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:44

RRProtocolReferenceStructureCreatorAP

RRProtocolReferenceStructureCreatorCAP

RRProtocolRelax
protocols/rotamer_recovery/RRProtocolRelax.hh:34

RRProtocolRelaxAP

RRProtocolRelaxCAP

RRProtocolRelaxCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:89

RRProtocolRelaxCreatorAP

RRProtocolRelaxCreatorCAP

RRProtocolRotamerTrials
protocols/rotamer_recovery/RRProtocolRotamerTrials.hh:34

RRProtocolRotamerTrialsAP

RRProtocolRotamerTrialsCAP

RRProtocolRotamerTrialsCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:62

RRProtocolRotamerTrialsCreatorAP

RRProtocolRotamerTrialsCreatorCAP

RRReporter
The reporting functionality for the rotamer recovery test Besides implementing the interface given in the base class RRReporter each RRReporter should have an entry in the conevience RotamerRecovery constructor so its use can be indicated by name.

RRReporterAP

RRReporterCAP

RRReporterCreator
The Creator class is responsible for creating a particular mover class.

RRReporterCreatorAP

RRReporterCreatorCAP

RRReporterHuman
The reporting functionality for the rotamer recovery test in a human readable format.

RRReporterHumanAP

RRReporterHumanCAP

RRReporterHumanCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:175

RRReporterHumanCreatorAP

RRReporterHumanCreatorCAP

RRReporterSQLite
protocols/rotamer_recovery/RRReporterSQLite.hh:46

RRReporterSQLiteAP

RRReporterSQLiteCAP

RRReporterSQLiteCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:184

RRReporterSQLiteCreatorAP

RRReporterSQLiteCreatorCAP

RRReporterSimple
protocols/rotamer_recovery/RRReporter.hh:86

RRReporterSimpleAP

RRReporterSimpleCAP

RRReporterSimpleCreator
protocols/rotamer_recovery/RotamerRecoveryCreator.hh:166

RRReporterSimpleCreatorAP

RRReporterSimpleCreatorCAP

RotamerRecovery
protocols/rotamer_recovery/RotamerRecovery.hh:36

RotamerRecoveryAP

RotamerRecoveryCAP

RotamerRecoveryFactory
Create Rotamer_Recovery Reporters

RotamerRecoveryFactoryAP

RotamerRecoveryFactoryCAP

RotamerRecoveryMover
protocols/rotamer_recovery/RotamerRecoveryMover.hh:40

RotamerRecoveryMoverAP

RotamerRecoveryMoverCAP

RotamerRecoveryMoverCreator
protocols/rotamer_recovery/RotamerRecoveryMoverCreator.hh:23

RotamerRecoveryMoverCreatorAP

RotamerRecoveryMoverCreatorCAP

SingletonBase_T_protocols_rotamer_recovery_RotamerRecoveryFactory_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_protocols_rotamer_recovery_RotamerRecoveryFactory_TAP

SingletonBase_T_protocols_rotamer_recovery_RotamerRecoveryFactory_TCAP

__CPP_RRComparerAutomorphicRMSDCreator__

__CPP_RRComparerAutomorphicRMSD__

__CPP_RRComparerChiDiffCreator__

__CPP_RRComparerChiDiff__

__CPP_RRComparerCreator__

__CPP_RRComparerElecDensDiffCreator__

__CPP_RRComparerElecDensDiff__

__CPP_RRComparerRotBinsCreator__

__CPP_RRComparerRotBins__

__CPP_RRComparer__

__CPP_RRProtocolCreator__

__CPP_RRProtocolMinPackCreator__

__CPP_RRProtocolMinPack__

__CPP_RRProtocolMoverCreator__

__CPP_RRProtocolMover__

__CPP_RRProtocolPackRotamersCreator__

__CPP_RRProtocolPackRotamers__

__CPP_RRProtocolRTMinCreator__

__CPP_RRProtocolRTMin__

__CPP_RRProtocolReferenceStructureCreator__

__CPP_RRProtocolReferenceStructure__

__CPP_RRProtocolRelaxCreator__

__CPP_RRProtocolRelax__

__CPP_RRProtocolRotamerTrialsCreator__

__CPP_RRProtocolRotamerTrials__

__CPP_RRProtocol__

__CPP_RRReporterCreator__

__CPP_RRReporterHumanCreator__

__CPP_RRReporterHuman__

__CPP_RRReporterSQLiteCreator__

__CPP_RRReporterSQLite__

__CPP_RRReporterSimpleCreator__

__CPP_RRReporterSimple__

__CPP_RRReporter__

__CPP_RotamerRecoveryMoverCreator__

__CPP_RotamerRecoveryMover__

__CPP_RotamerRecovery__

Variables

[hide private]

OL_features = rosetta.protocols.rotamer_recovery._protocols_ro...

OL_full = rosetta.protocols.rotamer_recovery._protocols_rotame...

OL_none = rosetta.protocols.rotamer_recovery._protocols_rotame...

__package__ = None

Variables Details

[hide private]

OL_features

Value:

rosetta.protocols.rotamer_recovery._protocols_rotamer_recovery_.Output
Level.OL_features

OL_full

Value:

rosetta.protocols.rotamer_recovery._protocols_rotamer_recovery_.Output
Level.OL_full

OL_none

Value:

rosetta.protocols.rotamer_recovery._protocols_rotamer_recovery_.Output
Level.OL_none