Module _protocols_rbsegment_relax_

guess_rbsegs_from_pose( (Pose)pose, (object)rigid_segs, (object)rb_chunks, (Loops)loops) -> None :
    use DSSP and simple rules to guess the asignment of rigid-body segments
    

    C++ signature :
        void guess_rbsegs_from_pose(core::pose::Pose,utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> > {lvalue},utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> > {lvalue},protocols::loops::Loops {lvalue})

read_RBSegment_file( (object)rbsegs, (Loops)loops, (str)filename, (bool)autoGenerateLoops, (int)nres, (vector1_Size)cutpts) -> None :
    ///////////////////////////////////////////////////////
     Parses an RB segment file into a vector of RBsegments
    //////////////////////////////////////////////////////
    

    C++ signature :
        void read_RBSegment_file(utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> > {lvalue},protocols::loops::Loops {lvalue},std::string,bool,int,utility::vector1<unsigned long, std::allocator<unsigned long> >)

remap_rb_segments( (object)rbsegs, (object)rbsegs_remap, (SequenceMapping)resmap) -> None :
    @apply res mapping to rbsegments
    

    C++ signature :
        void remap_rb_segments(utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> > {lvalue},core::id::SequenceMapping)

restore_pose_from_rbsegs( (object)rbsegs, (Pose)pose_in, (Pose)pose_out) -> None :
    restore loops from pose
    

    C++ signature :
        void restore_pose_from_rbsegs(utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,core::pose::Pose,core::pose::Pose {lvalue})

select_RBsegments( (object)rbsegs_in, (Loops)loops_in, (object)rbsegs_selected, (Loops)loops_selected) -> None :
    protocols/rbsegment_relax/RBSegment.hh:163

    C++ signature :
        void select_RBsegments(utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,protocols::loops::Loops,utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> > {lvalue},protocols::loops::Loops {lvalue})

set_constraints( (Pose)pose, (Pose)cst_pose, (float)cst_width, (float)cst_stdev, (int)cst_seqwidth) -> None :
    set up constraints accounting for missing density in start pose
    

    C++ signature :
        void set_constraints(core::pose::Pose {lvalue},core::pose::Pose,double,double,unsigned long)

set_rb_constraints( (Pose)pose, (Pose)cst_pose, (object)rbsegs, (SequenceMapping)resmap, (float)cst_width, (float)cst_stdev, (int)cst_seqwidth) -> None :
    set up constraints over RB segments only; allow ambiguity in sequence threading
    

    C++ signature :
        void set_rb_constraints(core::pose::Pose {lvalue},core::pose::Pose,utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,core::id::SequenceMapping,double,double,unsigned long)

setup_disconnected( (Pose)pose) -> None :
    build a pose where every residue is connected by jumps to vrt
    

    C++ signature :
        void setup_disconnected(core::pose::Pose {lvalue})

setup_pose_from_rbsegs( (object)rbsegs, (Pose)pose_in, (Pose)pose_out, (SequenceMapping)resmap, (MoveMap)mm [, (bool)fixligs=False]) -> None :
    remove loops from pose
    

    C++ signature :
        void setup_pose_from_rbsegs(utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,core::pose::Pose,core::pose::Pose {lvalue},core::id::SequenceMapping {lvalue},core::kinematics::MoveMap {lvalue} [,bool=False])

setup_pose_rbsegs_keep_loops( (Pose)pose, (object)rbsegs, (Loops)loops, (MoveMap)mm) -> vector1_Size :
    protocols/rbsegment_relax/util.hh:87

    C++ signature :
        utility::vector1<unsigned long, std::allocator<unsigned long> > setup_pose_rbsegs_keep_loops(core::pose::Pose {lvalue},utility::vector1<protocols::rbsegment_relax::RBSegment, std::allocator<protocols::rbsegment_relax::RBSegment> >,protocols::loops::Loops,boost::shared_ptr<core::kinematics::MoveMap>)

setup_star_topology( (Pose)pose) -> None :
    setup star-topology fold tree
    

    C++ signature :
        void setup_star_topology(core::pose::Pose {lvalue})

RB_DEFAULT

Value:

rosetta.protocols.rbsegment_relax._protocols_rbsegment_relax_.RBSegmen tType.RB_DEFAULT

RB_HELIX

Value:

rosetta.protocols.rbsegment_relax._protocols_rbsegment_relax_.RBSegmen tType.RB_HELIX

RB_SHEET

Value:

rosetta.protocols.rbsegment_relax._protocols_rbsegment_relax_.RBSegmen tType.RB_SHEET