Package rosetta :: Package protocols :: Package make_rot_lib :: Module _protocols_make_rot_lib_
[hide private]
[frames] | no frames]

Module _protocols_make_rot_lib_

Classes [hide private]
  CentroidRotNum
protocols/make_rot_lib/MakeRotLibOptionsData.hh:50
  CentroidRotNumAP
  CentroidRotNumCAP
  MakeRotLibJob
protocols/make_rot_lib/MakeRotLibJob.hh:30
  MakeRotLibJobAP
  MakeRotLibJobCAP
  MakeRotLibJobInputter
JobInputter that creats jobs based on MakeRotLib option files.
  MakeRotLibJobInputterAP
  MakeRotLibJobInputterCAP
  MakeRotLibJobInputterCreator
protocols/make_rot_lib/MakeRotLibJobInputterCreator.hh:22
  MakeRotLibJobInputterCreatorAP
  MakeRotLibJobInputterCreatorCAP
  MakeRotLibMover
protocols/make_rot_lib/MakeRotLibMover.hh:38
  MakeRotLibMoverAP
  MakeRotLibMoverCAP
  MakeRotLibOptionsData
Stores all options contained in a MakeRotLib option file
  MakeRotLibOptionsDataAP
  MakeRotLibOptionsDataCAP
  MakeRotLibPolymerType
protocols/make_rot_lib/MakeRotLibOptionsData.hh:58
  RotData
protocols/make_rot_lib/RotData.hh:38
  RotDataAP
  RotDataCAP
  TorsionRange
protocols/make_rot_lib/MakeRotLibOptionsData.hh:38
  TorsionRangeAP
  TorsionRangeCAP
  __CPP_MakeRotLibJobInputterCreator__
  __CPP_MakeRotLibJobInputter__
  __CPP_MakeRotLibMover__
Functions [hide private]
 
asp_corrections(...)
asp_corrections( (object)) -> None : protocols/make_rot_lib/MakeRotLib.hh:30
 
avg_cluster_cen_dist(...)
avg_cluster_cen_dist( (object), (int)) -> float : protocols/make_rot_lib/MakeRotLib.hh:61
 
calc_all_dist(...)
calc_all_dist( (object), (object)) -> None : protocols/make_rot_lib/MakeRotLib.hh:65
 
calc_centroids(...)
calc_centroids( (object), (object)) -> bool : protocols/make_rot_lib/MakeRotLib.hh:53
 
calc_dist(...)
calc_dist( (RotData), (RotData)) -> float : protocols/make_rot_lib/MakeRotLib.hh:57
 
calc_rotamer_clusters(...)
calc_rotamer_clusters( (object)) -> bool : protocols/make_rot_lib/MakeRotLib.hh:49
 
calc_std_dev(...)
calc_std_dev( (object), (__CPP_ScoreFunction__), (str)) -> None : protocols/make_rot_lib/MakeRotLib.hh:76
 
dunbrack_print(...)
dunbrack_print( (object), (object), (str)) -> None : protocols/make_rot_lib/MakeRotLib.hh:84
 
get_final_rot_probs(...)
get_final_rot_probs( (object)) -> None : protocols/make_rot_lib/MakeRotLib.hh:73
 
get_final_rots(...)
get_final_rots( (object), (object), (int)) -> None : protocols/make_rot_lib/MakeRotLib.hh:69
 
glu_corrections(...)
glu_corrections( (object)) -> None : protocols/make_rot_lib/MakeRotLib.hh:33
 
init_rotamers_centroids(...)
init_rotamers_centroids( (object), (object), (int), (str), (str), (bool), (float), (float)) -> None : protocols/make_rot_lib/MakeRotLib.hh:44
 
min_rotamers(...)
min_rotamers( (object), (__CPP_ScoreFunction__), (str)) -> None : protocols/make_rot_lib/MakeRotLib.hh:40
 
phe_tyr_corrections(...)
phe_tyr_corrections( (object)) -> None : protocols/make_rot_lib/MakeRotLib.hh:36
 
pretty_print_rd(...)
pretty_print_rd( (RotData)) -> None : protocols/make_rot_lib/MakeRotLib.hh:80
Variables [hide private]
  PEPTIDE = rosetta.protocols.make_rot_lib._protocols_make_rot_l...
  PEPTOID = rosetta.protocols.make_rot_lib._protocols_make_rot_l...
  __package__ = None
Function Details [hide private]

asp_corrections(...)

 

asp_corrections( (object)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:30

    C++ signature :
        void asp_corrections(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

avg_cluster_cen_dist(...)

 

avg_cluster_cen_dist( (object), (int)) -> float :
    protocols/make_rot_lib/MakeRotLib.hh:61

    C++ signature :
        double avg_cluster_cen_dist(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},unsigned long {lvalue})

calc_all_dist(...)

 

calc_all_dist( (object), (object)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:65

    C++ signature :
        void calc_all_dist(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

calc_centroids(...)

 

calc_centroids( (object), (object)) -> bool :
    protocols/make_rot_lib/MakeRotLib.hh:53

    C++ signature :
        bool calc_centroids(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

calc_dist(...)

 

calc_dist( (RotData), (RotData)) -> float :
    protocols/make_rot_lib/MakeRotLib.hh:57

    C++ signature :
        double calc_dist(protocols::make_rot_lib::RotData {lvalue},protocols::make_rot_lib::RotData {lvalue})

calc_rotamer_clusters(...)

 

calc_rotamer_clusters( (object)) -> bool :
    protocols/make_rot_lib/MakeRotLib.hh:49

    C++ signature :
        bool calc_rotamer_clusters(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

calc_std_dev(...)

 

calc_std_dev( (object), (__CPP_ScoreFunction__), (str)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:76

    C++ signature :
        void calc_std_dev(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},boost::shared_ptr<core::scoring::ScoreFunction>,std::string)

dunbrack_print(...)

 

dunbrack_print( (object), (object), (str)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:84

    C++ signature :
        void dunbrack_print(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},std::string)

get_final_rot_probs(...)

 

get_final_rot_probs( (object)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:73

    C++ signature :
        void get_final_rot_probs(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

get_final_rots(...)

 

get_final_rots( (object), (object), (int)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:69

    C++ signature :
        void get_final_rots(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},unsigned long {lvalue})

glu_corrections(...)

 

glu_corrections( (object)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:33

    C++ signature :
        void glu_corrections(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

init_rotamers_centroids(...)

 

init_rotamers_centroids( (object), (object), (int), (str), (str), (bool), (float), (float)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:44

    C++ signature :
        void init_rotamers_centroids(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},unsigned long {lvalue},std::string,std::string {lvalue},bool,double,double)

min_rotamers(...)

 

min_rotamers( (object), (__CPP_ScoreFunction__), (str)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:40

    C++ signature :
        void min_rotamers(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue},boost::shared_ptr<core::scoring::ScoreFunction>,std::string)

phe_tyr_corrections(...)

 

phe_tyr_corrections( (object)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:36

    C++ signature :
        void phe_tyr_corrections(utility::vector1<protocols::make_rot_lib::RotData, std::allocator<protocols::make_rot_lib::RotData> > {lvalue})

pretty_print_rd(...)

 

pretty_print_rd( (RotData)) -> None :
    protocols/make_rot_lib/MakeRotLib.hh:80

    C++ signature :
        void pretty_print_rd(protocols::make_rot_lib::RotData {lvalue})


Variables Details [hide private]

PEPTIDE

Value:
rosetta.protocols.make_rot_lib._protocols_make_rot_lib_.MakeRotLibPoly\
merType.PEPTIDE

PEPTOID

Value:
rosetta.protocols.make_rot_lib._protocols_make_rot_lib_.MakeRotLibPoly\
merType.PEPTOID