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Package rosetta :: Package protocols :: Package kinematic_closure :: Package perturbers :: Module _protocols_kinematic_closure_perturbers_
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Module _protocols_kinematic_closure_perturbers_

Classes [hide private]
  BondAnglePerturber
Resample each backbone bond angle from a gaussian distribution.
  BondAnglePerturberAP
  BondAnglePerturberCAP
  FragmentPerturber
Pick phi/psi torsions from the given fragment library.
  FragmentPerturberAP
  FragmentPerturberCAP
  IdealizeNonPhiPsi
Set all the non-phi/psi DOFs to ideal values.
  IdealizeNonPhiPsiAP
  IdealizeNonPhiPsiCAP
  LogFilePerturber
Read torsion angles, bond angles, and bond lengths from a log file.
  LogFilePerturberAP
  LogFilePerturberCAP
  OmegaPerturber
protocols/kinematic_closure/perturbers/OmegaPerturber.hh:22
  OmegaPerturberAP
  OmegaPerturberCAP
  Perturber
Base class for all of the perturber algorithms.
  PerturberAP
  PerturberCAP
  PerturberSet
Maintain a set of perturbers to be executed together.
  PerturberSetAP
  PerturberSetCAP
  Rama2bPerturber
Pick phi/psi pairs from the neighbor-dependent rama distribution.
  Rama2bPerturberAP
  Rama2bPerturberCAP
  RamaPerturber
Pick phi/psi pairs from the rama distribution.
  RamaPerturberAP
  RamaPerturberCAP
  SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.
  SingletonBase_T_core_chemical_ChemicalManager_TAP
  SingletonBase_T_core_chemical_ChemicalManager_TCAP
  UniformPerturber
Sample backbone torsions from a uniform distribution.
  UniformPerturberAP
  UniformPerturberCAP
  VicinityPerturber
Limit sampling to phi/psi pairs within some distance of a target loop.
  VicinityPerturberAP
  VicinityPerturberCAP
  WalkingBondAnglePerturber
Resample each backbone bond angle from a gaussian distribution.
  WalkingBondAnglePerturberAP
  WalkingBondAnglePerturberCAP
  WalkingPerturber
Make small perturbations to the previous backbone torsions.
  WalkingPerturberAP
  WalkingPerturberCAP
  __CPP_BondAnglePerturber__
  __CPP_FragmentPerturber__
  __CPP_IdealizeNonPhiPsi__
  __CPP_LogFilePerturber__
  __CPP_OmegaPerturber__
  __CPP_PerturberSet__
  __CPP_Perturber__
  __CPP_Rama2bPerturber__
  __CPP_RamaPerturber__
  __CPP_UniformPerturber__
  __CPP_VicinityPerturber__
  __CPP_WalkingBondAnglePerturber__
  __CPP_WalkingPerturber__
Variables [hide private]
  __package__ = None
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