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Package rosetta :: Package protocols :: Package genetic_algorithm :: Module _protocols_genetic_algorithm_
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Module _protocols_genetic_algorithm_

Classes [hide private]
  DiscreteRandomizer
/////////////////////////////////////////////////////////////////////////////////////////////////
  DiscreteRandomizerAP
  DiscreteRandomizerCAP
  Entity
Entity: a vector of EntityElements used to describe the state for a system under optimization.
  EntityAP
  EntityCAP
  EntityElement
Entity element
  EntityElementAP
  EntityElementCAP
  EntityElementCreator
Entity element creator
  EntityElementCreatorAP
  EntityElementCreatorCAP
  EntityElementFactory
The %EntityElementFactory is responsible for instantiating entity elements from strings.
  EntityElementFactoryAP
  EntityElementFactoryCAP
  EntityElementsEqual
protocols/genetic_algorithm/Entity.hh:203
  EntityElementsEqualAP
  EntityElementsEqualCAP
  EntityRandomizer
/////////////////////////////////////////////////////////////////////////////////////////////////
  EntityRandomizerAP
  EntityRandomizerCAP
  FitnessFunction
protocols/genetic_algorithm/FitnessFunction.hh:26
  FitnessFunctionAP
  FitnessFunctionCAP
  GeneticAlgorithm
protocols/genetic_algorithm/GeneticAlgorithm.hh:145
  GeneticAlgorithmAP
  GeneticAlgorithmBase
protocols/genetic_algorithm/GeneticAlgorithm.hh:38
  GeneticAlgorithmBaseAP
  GeneticAlgorithmBaseCAP
  GeneticAlgorithmCAP
  Mutate1Randomizer
protocols/genetic_algorithm/Mutate1Randomizer.hh:28
  Mutate1RandomizerAP
  Mutate1RandomizerCAP
  PositionSpecificRandomizer
///////////////////////////////////////////////////////////////////////////////////////////////// different set of choices at each position in Entity's traits
  PositionSpecificRandomizerAP
  PositionSpecificRandomizerCAP
  SingletonBase_T_protocols_genetic_algorithm_EntityElementFactory_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.
  SingletonBase_T_protocols_genetic_algorithm_EntityElementFactory_TAP
  SingletonBase_T_protocols_genetic_algorithm_EntityElementFactory_TCAP
  Vec1Hash
protocols/genetic_algorithm/Entity.hh:191
  Vec1HashAP
  Vec1HashCAP
  __CPP_DiscreteRandomizer__
  __CPP_EntityElementCreator__
  __CPP_EntityElement__
  __CPP_EntityRandomizer__
  __CPP_Entity__
  __CPP_FitnessFunction__
  __CPP_GeneticAlgorithmBase__
  __CPP_GeneticAlgorithm__
  __CPP_Mutate1Randomizer__
  __CPP_PositionSpecificRandomizer__
Variables [hide private]
  __package__ = None
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