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CombinedTaskOperation protocols/flxbb/LayerDesignOperation.hh:243 |
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| CombinedTaskOperationAP | |||
| CombinedTaskOperationCAP | |||
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DesignTask //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| DesignTaskAP | |||
| DesignTaskCAP | |||
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DesignTask_Layer //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| DesignTask_LayerAP | |||
| DesignTask_LayerCAP | |||
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DesignTask_Normal //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| DesignTask_NormalAP | |||
| DesignTask_NormalCAP | |||
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FilterStructs ///////////////////////////////////////////////////////////////////////////////////// |
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| FilterStructsAP | |||
| FilterStructsCAP | |||
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FilterStructs_Packstat ///////////////////////////////////////////////////////////////////////////////////// |
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| FilterStructs_PackstatAP | |||
| FilterStructs_PackstatCAP | |||
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FilterStructs_TotalCharge ///////////////////////////////////////////////////////////////////////////////////// |
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| FilterStructs_TotalChargeAP | |||
| FilterStructs_TotalChargeCAP | |||
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FlxbbDesign //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| FlxbbDesignAP | |||
| FlxbbDesignCAP | |||
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FlxbbDesignCreator protocols/flxbb/FlxbbDesignCreator.hh:22 |
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| FlxbbDesignCreatorAP | |||
| FlxbbDesignCreatorCAP | |||
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FlxbbDesignPack //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| FlxbbDesignPackAP | |||
| FlxbbDesignPackCAP | |||
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InterlockAroma //////////////////////////////////////////////////////////////////////////////////////////////////// |
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| InterlockAromaAP | |||
| InterlockAromaCAP | |||
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LayerDesignOperation protocols/flxbb/LayerDesignOperation.hh:61 |
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| LayerDesignOperationAP | |||
| LayerDesignOperationCAP | |||
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LayerDesignOperationCreator protocols/flxbb/LayerDesignOperationCreator.hh:21 |
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| LayerDesignOperationCreatorAP | |||
| LayerDesignOperationCreatorCAP | |||
| __CPP_CombinedTaskOperation__ | |||
| __CPP_DesignTask_Layer__ | |||
| __CPP_DesignTask_Normal__ | |||
| __CPP_DesignTask__ | |||
| __CPP_FilterStructs_Packstat__ | |||
| __CPP_FilterStructs_TotalCharge__ | |||
| __CPP_FilterStructs__ | |||
| __CPP_FlxbbDesignCreator__ | |||
| __CPP_FlxbbDesignPack__ | |||
| __CPP_FlxbbDesign__ | |||
| __CPP_InterlockAroma__ | |||
| __CPP_LayerDesignOperationCreator__ | |||
| __CPP_LayerDesignOperation__ | |||
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| None : |
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__package__ = None
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protocols/flxbb/FlxbbDesign_main.hh:20
C++ signature :
void FlxbbDesign_main()
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constraints_NtoC( (Pose)pose, (float)coef [, (float)condist=11.0]) -> object :
constraint between N- and C-terminal Ca atoms
C++ signature :
utility::vector1<boost::shared_ptr<core::scoring::constraints::Constraint>, std::allocator<boost::shared_ptr<core::scoring::constraints::Constraint> > > constraints_NtoC(core::pose::Pose,double [,double=11.0])
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constraints_sheet( (Pose)pose, (float)coef [, (float)condist=5.5]) -> object :
constrain between Ca atoms in beta sheet
C++ signature :
utility::vector1<boost::shared_ptr<core::scoring::constraints::Constraint>, std::allocator<boost::shared_ptr<core::scoring::constraints::Constraint> > > constraints_sheet(core::pose::Pose,double [,double=5.5])
constraints_sheet( (Pose)pose, (object)blue, (float)coef [, (float)condist=5.5]) -> object :
constrain between Ca atoms in beta sheet, which are specified in blueprint file
C++ signature :
utility::vector1<boost::shared_ptr<core::scoring::constraints::Constraint>, std::allocator<boost::shared_ptr<core::scoring::constraints::Constraint> > > constraints_sheet(core::pose::Pose,boost::shared_ptr<protocols::jd2::parser::BluePrint>,double [,double=5.5])
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find_ligands( (Pose)pose) -> vector1_Size :
Looks for unknown amino acids in the pose and returns their indices
C++ signature :
utility::vector1<unsigned long, std::allocator<unsigned long> > find_ligands(core::pose::Pose)
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