Module _protocols_antibody_legacy_

Classes

[hide private]

Antibody
antibody definition

AntibodyAP

AntibodyCAP

AntibodyModeler
protocols/antibody_legacy/AntibodyModeler.hh:41

AntibodyModelerAP

AntibodyModelerCAP

CDRH3Modeler
/////////////////////////////////////////////////////////////////////// Ab initio modeling of CDR H3 loop

CDRH3ModelerAP

CDRH3ModelerCAP

CloseOneMover
Closes only one CDR onto a framework

CloseOneMoverAP

CloseOneMoverCAP

GraftMover
/////////////////////////////////////////////////////////////////////// Grafts a series of CDR onto a framework

GraftMoverAP

GraftMoverCAP

GraftOneMover
/////////////////////////////////////////////////////////////////////// Grafts only one CDR onto a framework

GraftOneMoverAP

GraftOneMoverCAP

LoopRlxMover
Closes only one CDR onto a framework

LoopRlxMoverAP

LoopRlxMoverCAP

SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_core_chemical_ChemicalManager_TAP

SingletonBase_T_core_chemical_ChemicalManager_TCAP

__CPP_AntibodyModeler__

__CPP_CDRH3Modeler__

__CPP_CloseOneMover__

__CPP_GraftMover__

__CPP_GraftOneMover__

__CPP_LoopRlxMover__

Functions

[hide private]

read_H3_cter_fragment(...)
read_H3_cter_fragment( (Antibody)antibody_in, (vector1_FragData)H3_base_library, (bool)is_camelid) -> None : protocols/antibody_legacy/CDRH3Modeler.hh:239

simple_fold_tree(...)
simple_fold_tree( (Pose)pose_in, (int)jumppoint1, (int)cutpoint, (int)jumppoint2) -> None : protocols/antibody_legacy/CDRH3Modeler.hh:251

simple_one_loop_fold_tree(...)
simple_one_loop_fold_tree( (Pose)pose, (Loop)loop) -> None : protocols/antibody_legacy/CDRH3Modeler.hh:244

Variables

[hide private]

__package__ = None

Function Details

[hide private]

read_H3_cter_fragment(...)


read_H3_cter_fragment( (Antibody)antibody_in, (vector1_FragData)H3_base_library, (bool)is_camelid) -> None :
    protocols/antibody_legacy/CDRH3Modeler.hh:239

    C++ signature :
        void read_H3_cter_fragment(protocols::antibody_legacy::Antibody {lvalue},utility::vector1<core::fragment::FragData, std::allocator<core::fragment::FragData> > {lvalue},bool)

simple_fold_tree(...)


simple_fold_tree( (Pose)pose_in, (int)jumppoint1, (int)cutpoint, (int)jumppoint2) -> None :
    protocols/antibody_legacy/CDRH3Modeler.hh:251

    C++ signature :
        void simple_fold_tree(core::pose::Pose {lvalue},unsigned long,unsigned long,unsigned long)

simple_one_loop_fold_tree(...)


simple_one_loop_fold_tree( (Pose)pose, (Loop)loop) -> None :
    protocols/antibody_legacy/CDRH3Modeler.hh:244

    C++ signature :
        void simple_one_loop_fold_tree(core::pose::Pose {lvalue},protocols::loops::Loop)