SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_core_chemical_ChemicalManager_TAP

SingletonBase_T_core_chemical_ChemicalManager_TCAP

SingletonBase_T_protocols_jumping_StandardPairingLibrary_T
SingletonBase is meant to serve as a base class for singleton classes in Rosetta handling the initialization of the singleton in a thread-safe way.

SingletonBase_T_protocols_jumping_StandardPairingLibrary_TAP

SingletonBase_T_protocols_jumping_StandardPairingLibrary_TCAP

StageID
protocols/abinitio/FragmentSampler.fwd.hh:33

StrandConstraints
protocols/abinitio/StrandConstraints.hh:75

StrandConstraintsAP

StrandConstraintsCAP

Template
protocols/abinitio/Template.hh:54

TemplateAP

TemplateCAP

TemplateJumpSetup
protocols/abinitio/TemplateJumpSetup.hh:50

TemplateJumpSetupAP

TemplateJumpSetupCAP

Templates
protocols/abinitio/Templates.hh:58

TemplatesAP

TemplatesCAP

_HashEntry
protocols/abinitio/PairingStatistics.hh:122

_HashEntryAP

_HashEntryCAP

_MergableEntries
protocols/abinitio/PairingStatistics.hh:115

_MergableEntriesAP

_MergableEntriesCAP

__CPP_AbrelaxMover__

__CPP_AllResiduesChanged__

__CPP_ClassicAbinitio__

__CPP_ConstraintFragmentSampler__

__CPP_CoordinateConstraintKC__

__CPP_DomainAssemblyCreator__

__CPP_DomainAssembly__

__CPP_DoubleLayerKinematicAbinitio__

__CPP_FixTemplateJumpSetup__

__CPP_FoldConstraints__

__CPP_FragmentSampler__

__CPP_HedgeArchive__

__CPP_IterativeAbrelax__

__CPP_IterativeBase__

__CPP_IterativeCentroid__

__CPP_IterativeFullatom__

__CPP_JumpingFoldConstraintsWrapper__

__CPP_KinematicAbinitio__

__CPP_KinematicControl__

__CPP_KinematicTaskControl__

__CPP_LoopJumpFoldCst__

__CPP_MembraneAbinitio__

__CPP_Protocol__

__CPP_ResolutionSwitcher__

__CPP_TemplateJumpSetup__

Functions

[hide private]

None :

Broker_main()
Initiates AbrelaxMover using the job distribution (jd2)

create_ClassicFragmentMover(...)
create_ClassicFragmentMover( (FragSet)arg1, (MoveMap)arg2) -> ClassicFragmentMover :

hash_value(...)
hash_value( (StrandPairing)val) -> int : protocols/abinitio/PairingStatistics.hh:111

None :

register_options_broker()
Registers options that are relevant to the application.

int :

run_boinc_debug()
protocols/abinitio/vs_test.hh:19

Variables

[hide private]

ALL_STAGES = rosetta.protocols.abinitio._protocols_abinitio_.S...

END_ABINITIO = rosetta.protocols.abinitio._protocols_abinitio_...

LAST_STAGE = rosetta.protocols.abinitio._protocols_abinitio_.S...

LOOP_CLOSURE = rosetta.protocols.abinitio._protocols_abinitio_...

RELAX = rosetta.protocols.abinitio._protocols_abinitio_.StageI...

STAGE_1 = rosetta.protocols.abinitio._protocols_abinitio_.Stag...

STAGE_2 = rosetta.protocols.abinitio._protocols_abinitio_.Stag...

STAGE_3 = rosetta.protocols.abinitio._protocols_abinitio_.Stag...

STAGE_3a = rosetta.protocols.abinitio._protocols_abinitio_.Sta...

STAGE_3b = rosetta.protocols.abinitio._protocols_abinitio_.Sta...

STAGE_4 = rosetta.protocols.abinitio._protocols_abinitio_.Stag...

SWITCH_TO_FULLATOM = rosetta.protocols.abinitio._protocols_abi...

__package__ = None

Function Details

[hide private]

Broker_main()

    Initiates AbrelaxMover using the job distribution (jd2)
    

    C++ signature :
        void Broker_main()

Returns: None :

create_ClassicFragmentMover(...)


create_ClassicFragmentMover( (FragSet)arg1, (MoveMap)arg2) -> ClassicFragmentMover :

    C++ signature :
        boost::shared_ptr<protocols::simple_moves::ClassicFragmentMover> create_ClassicFragmentMover(core::fragment::FragSet,core::kinematics::MoveMap)

create_ClassicFragmentMover( (ConstantLengthFragSet)arg1, (MoveMap)arg2) -> ClassicFragmentMover :

    C++ signature :
        boost::shared_ptr<protocols::simple_moves::ClassicFragmentMover> create_ClassicFragmentMover(core::fragment::ConstantLengthFragSet,core::kinematics::MoveMap)

hash_value(...)


hash_value( (StrandPairing)val) -> int :
    protocols/abinitio/PairingStatistics.hh:111

    C++ signature :
        unsigned long hash_value(core::scoring::dssp::StrandPairing)

hash_value( (PairingStatEntry)val) -> int :
    protocols/abinitio/PairingStatistics.hh:108

    C++ signature :
        unsigned long hash_value(protocols::abinitio::PairingStatEntry)

register_options_broker()

    Registers options that are relevant to the application. This function
    must be called prior to Broker_main() or Loopbuild_Threading_main().
    

    C++ signature :
        void register_options_broker()

Returns: None :

run_boinc_debug()

    protocols/abinitio/vs_test.hh:19

    C++ signature :
        int run_boinc_debug()

Returns: int :

Variables Details

[hide private]

ALL_STAGES

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.ALL_STAGES

END_ABINITIO

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.END_ABINITIO

LAST_STAGE

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.LAST_STAGE

LOOP_CLOSURE

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.LOOP_CLOSURE

RELAX

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.RELAX

STAGE_1

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_1

STAGE_2

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_2

STAGE_3

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_3

STAGE_3a

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_3a

STAGE_3b

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_3b

STAGE_4

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.STAGE_4

SWITCH_TO_FULLATOM

Value:

rosetta.protocols.abinitio._protocols_abinitio_.StageID.SWITCH_TO_FULL
ATOM