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Package rosetta :: Package core :: Package chemical :: Module _core_chemical_ :: Class ResidueDatabaseIO
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Class ResidueDatabaseIO

 object --+    
          |    
??.instance --+
              |
             ResidueDatabaseIO

core/chemical/ResidueDatabaseIO.hh:33

Instance Methods [hide private]
 
__init__(...)
__init__( (object)arg1) -> None :
 
__reduce__(...)
helper for pickle
 
get_all_residues_in_database(...)
get_all_residues_in_database( (ResidueDatabaseIO)arg1, (object)db_session) -> vector1_string : core/chemical/ResidueDatabaseIO.hh:116
 
get_version(...)
get_version( (ResidueDatabaseIO)arg1) -> float : core/chemical/ResidueDatabaseIO.hh:100
 
initialize(...)
initialize( (ResidueDatabaseIO)arg1, (object)db_session) -> None : write the schema
 
read_residuetype_from_database(...)
read_residuetype_from_database( (ResidueDatabaseIO)arg1, (AtomTypeSet)atom_types, (ElementSet)elements, (MMAtomTypeSet)mm_atom_types, (OrbitalTypeSet)orbital_atom_types, (str)residue_type_set_name, (str)residue_type_name, (object)db_session) -> ResidueType : core/chemical/ResidueDatabaseIO.hh:114
 
write_residuetype_to_database(...)
write_residuetype_to_database( (ResidueDatabaseIO)arg1, (str)residue_type_set_name, (ResidueType)res_type, (object)db_session) -> None : core/chemical/ResidueDatabaseIO.hh:105
 
write_schema_to_db(...)
write_schema_to_db( (ResidueDatabaseIO)arg1, (object)db_session) -> None : generate the table schemas and write them to the database

Inherited from unreachable.instance: __new__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  __instance_size__ = 32
Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(...)
(Constructor)

  

__init__( (object)arg1) -> None :

    C++ signature :
        void __init__(_object*)

__init__( (object)arg1, (ResidueDatabaseIO)) -> None :
    core/chemical/ResidueDatabaseIO.hh:33

    C++ signature :
        void __init__(_object*,core::chemical::ResidueDatabaseIO)
Overrides: object.__init__

__reduce__(...)

 

helper for pickle

Overrides: object.__reduce__
(inherited documentation)

get_all_residues_in_database(...)

  

get_all_residues_in_database( (ResidueDatabaseIO)arg1, (object)db_session) -> vector1_string :
    core/chemical/ResidueDatabaseIO.hh:116

    C++ signature :
        utility::vector1<std::string, std::allocator<std::string> > get_all_residues_in_database(core::chemical::ResidueDatabaseIO {lvalue},boost::shared_ptr<utility::sql_database::session>)

get_version(...)

  

get_version( (ResidueDatabaseIO)arg1) -> float :
    core/chemical/ResidueDatabaseIO.hh:100

    C++ signature :
        double get_version(core::chemical::ResidueDatabaseIO {lvalue})

initialize(...)

  

initialize( (ResidueDatabaseIO)arg1, (object)db_session) -> None :
    write the schema
    

    C++ signature :
        void initialize(core::chemical::ResidueDatabaseIO {lvalue},boost::shared_ptr<utility::sql_database::session>)

read_residuetype_from_database(...)

  

read_residuetype_from_database( (ResidueDatabaseIO)arg1, (AtomTypeSet)atom_types, (ElementSet)elements, (MMAtomTypeSet)mm_atom_types, (OrbitalTypeSet)orbital_atom_types, (str)residue_type_set_name, (str)residue_type_name, (object)db_session) -> ResidueType :
    core/chemical/ResidueDatabaseIO.hh:114

    C++ signature :
        boost::shared_ptr<core::chemical::ResidueType> read_residuetype_from_database(core::chemical::ResidueDatabaseIO {lvalue},boost::shared_ptr<core::chemical::AtomTypeSet const>,boost::shared_ptr<core::chemical::ElementSet const>,boost::shared_ptr<core::chemical::MMAtomTypeSet const>,boost::shared_ptr<core::chemical::orbitals::OrbitalTypeSet const>,std::string,std::string,boost::shared_ptr<utility::sql_database::session>)

write_residuetype_to_database(...)

  

write_residuetype_to_database( (ResidueDatabaseIO)arg1, (str)residue_type_set_name, (ResidueType)res_type, (object)db_session) -> None :
    core/chemical/ResidueDatabaseIO.hh:105

    C++ signature :
        void write_residuetype_to_database(core::chemical::ResidueDatabaseIO {lvalue},std::string,core::chemical::ResidueType,boost::shared_ptr<utility::sql_database::session>)

write_schema_to_db(...)

  

write_schema_to_db( (ResidueDatabaseIO)arg1, (object)db_session) -> None :
    generate the table schemas and write them to the database
    

    C++ signature :
        void write_schema_to_db(core::chemical::ResidueDatabaseIO {lvalue},boost::shared_ptr<utility::sql_database::session>)

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