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object --+
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??.instance --+
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Bond
basic chemical Bond name, element, certain properties and parameters from .params file
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Inherited from Inherited from |
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__instance_size__ = 32
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Inherited from |
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GetMaximumElectrons( (Bond)arg1) -> int :
core/chemical/Bond.hh:113
C++ signature :
unsigned long GetMaximumElectrons(core::chemical::Bond {lvalue})
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GetMinimumElectrons( (Bond)arg1) -> int :
core/chemical/Bond.hh:112
C++ signature :
unsigned long GetMinimumElectrons(core::chemical::Bond {lvalue})
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GetNumberOfElectrons( (Bond)arg1) -> int :
core/chemical/Bond.hh:111
C++ signature :
unsigned long GetNumberOfElectrons(core::chemical::Bond {lvalue})
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GetSDAltFileID( (Bond)arg1) -> int :
core/chemical/Bond.hh:120
C++ signature :
unsigned long GetSDAltFileID(core::chemical::Bond {lvalue})
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GetSDFileID( (Bond)arg1) -> int :
core/chemical/Bond.hh:119
C++ signature :
unsigned long GetSDFileID(core::chemical::Bond {lvalue})
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IsBondInRing( (Bond)arg1) -> bool :
core/chemical/Bond.hh:117
C++ signature :
bool IsBondInRing(core::chemical::Bond {lvalue})
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IsBondOrderKnown( (Bond)arg1) -> bool :
core/chemical/Bond.hh:115
C++ signature :
bool IsBondOrderKnown(core::chemical::Bond {lvalue})
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SetSDFType( (Bond)arg1, (int)SDF_ID) -> None :
Reset the internal data such that it matches the appropriate value for the SDF datatype.
Substitution (taken from) for BCL's FindBondTypeFromSDFInfo( const std::size_t &SDF_ID)
C++ signature :
void SetSDFType(core::chemical::Bond {lvalue},unsigned long)
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__init__( (object)arg1) -> None :
C++ signature :
void __init__(_object*)
__init__( (object)arg1, (Bond)) -> None :
basic chemical Bond
name, element, certain properties and parameters from .params file
C++ signature :
void __init__(_object*,core::chemical::Bond)
__init__( (object)arg1, (float)d, (BondName)name [, (bool)cut_bond=False]) -> None :
core/chemical/Bond.hh:44
C++ signature :
void __init__(_object*,double,core::chemical::BondName [,bool=False])
__init__( (object)arg1, (float)d, (BondOrder)order, (BondConjugability)conj, (BondAromaticity)aroma [, (BondRingness)ring=rosetta.core.chemical._core_chemical_.BondRingness.UnknownRingness [, (BondIsometry)isom=rosetta.core.chemical._core_chemical_.BondIsometry.UnknownIsometry [, (bool)cut_bond=False]]]) -> None :
core/chemical/Bond.hh:45
C++ signature :
void __init__(_object*,double,core::chemical::BondOrder,core::chemical::BondConjugability,core::chemical::BondAromaticity [,core::chemical::BondRingness=rosetta.core.chemical._core_chemical_.BondRingness.UnknownRingness [,core::chemical::BondIsometry=rosetta.core.chemical._core_chemical_.BondIsometry.UnknownIsometry [,bool=False]]])
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helper for pickle
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__str__( (Bond)arg1) -> object :
C++ signature :
_object* __str__(core::chemical::Bond {lvalue})
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aromaticity( (Bond)arg1, (BondAromaticity)aroma) -> None :
core/chemical/Bond.hh:61
C++ signature :
void aromaticity(core::chemical::Bond {lvalue},core::chemical::BondAromaticity)
aromaticity( (Bond)arg1) -> BondAromaticity :
core/chemical/Bond.hh:87
C++ signature :
core::chemical::BondAromaticity aromaticity(core::chemical::Bond {lvalue})
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bond_name( (Bond)arg1, (BondName)bond_name) -> None :
core/chemical/Bond.hh:51
C++ signature :
void bond_name(core::chemical::Bond {lvalue},core::chemical::BondName)
bond_name( (Bond)arg1) -> BondName :
core/chemical/Bond.hh:75
C++ signature :
core::chemical::BondName bond_name(core::chemical::Bond {lvalue})
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conjugability( (Bond)arg1, (BondConjugability)conjug) -> None :
core/chemical/Bond.hh:58
C++ signature :
void conjugability(core::chemical::Bond {lvalue},core::chemical::BondConjugability)
conjugability( (Bond)arg1) -> BondConjugability :
core/chemical/Bond.hh:84
C++ signature :
core::chemical::BondConjugability conjugability(core::chemical::Bond {lvalue})
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cut_bond( (Bond)arg1, (bool)cut_bond) -> None :
core/chemical/Bond.hh:53
C++ signature :
void cut_bond(core::chemical::Bond {lvalue},bool)
cut_bond( (Bond)arg1) -> bool :
core/chemical/Bond.hh:78
C++ signature :
bool cut_bond(core::chemical::Bond {lvalue})
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distance( (Bond)arg1, (float)distance) -> None :
core/chemical/Bond.hh:48
C++ signature :
void distance(core::chemical::Bond {lvalue},double)
distance( (Bond)arg1) -> float :
core/chemical/Bond.hh:72
C++ signature :
double distance(core::chemical::Bond {lvalue})
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is_fake( (Bond)arg1) -> bool :
Return true if this bond represents a non-physical bond
C++ signature :
bool is_fake(core::chemical::Bond {lvalue})
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isometry( (Bond)arg1, (BondIsometry)isom) -> None :
core/chemical/Bond.hh:66
C++ signature :
void isometry(core::chemical::Bond {lvalue},core::chemical::BondIsometry)
isometry( (Bond)arg1) -> BondIsometry :
core/chemical/Bond.hh:93
C++ signature :
core::chemical::BondIsometry isometry(core::chemical::Bond {lvalue})
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order( (Bond)arg1, (BondOrder)order) -> None :
core/chemical/Bond.hh:56
C++ signature :
void order(core::chemical::Bond {lvalue},core::chemical::BondOrder)
order( (Bond)arg1) -> BondOrder :
core/chemical/Bond.hh:81
C++ signature :
core::chemical::BondOrder order(core::chemical::Bond {lvalue})
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print( (Bond)arg1, (OStream)out) -> None :
core/chemical/Bond.hh:99
C++ signature :
void print(core::chemical::Bond {lvalue},std::ostream {lvalue})
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ringness( (Bond)arg1, (BondRingness)ring) -> None :
core/chemical/Bond.hh:63
C++ signature :
void ringness(core::chemical::Bond {lvalue},core::chemical::BondRingness)
ringness( (Bond)arg1) -> BondRingness :
core/chemical/Bond.hh:90
C++ signature :
core::chemical::BondRingness ringness(core::chemical::Bond {lvalue})
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