full_model_info¶

Bindings for core::pose::full_model_info namespace

class pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶

Bases: CacheableData

Keep track of all information related to how a subpose ‘fits in’ to global modeling scheme.

See FullModelParameters for more information on the global modeling scheme, including
full_sequence, etc.

add_other_pose(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::FullModelInfo::add_other_pose(class std::shared_ptr<class core::pose::Pose>) –> void

add_submotif_info(*args, **kwargs)¶

Overloaded function.

add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str) -> None
add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str, seed: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const std::string &, const bool &) –> void

add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > >) –> void

add_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_op: core::pose::full_model_info::SubMotifInfo) -> None

C++: core::pose::full_model_info::FullModelInfo::add_submotif_info(class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>) –> void

alignment_anchor_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::alignment_anchor_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

assign(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, : pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶: C++: core::pose::full_model_info::FullModelInfo::operator=(const class core::pose::full_model_info::FullModelInfo &) –> class core::pose::full_model_info::FullModelInfo &

calc_rms_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::calc_rms_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

chains_in_full_model(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::chains_in_full_model() const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

clear_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None¶: C++: core::pose::full_model_info::FullModelInfo::clear_other_pose_list() –> void

clear_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None¶: C++: core::pose::full_model_info::FullModelInfo::clear_res_list() –> void

clone(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.basic.datacache.CacheableData¶: C++: core::pose::full_model_info::FullModelInfo::clone() const –> class std::shared_ptr<class basic::datacache::CacheableData>

clone_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶: C++: core::pose::full_model_info::FullModelInfo::clone_info() const –> class std::shared_ptr<class core::pose::full_model_info::FullModelInfo>

conventional_chains(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_char¶: C++: core::pose::full_model_info::FullModelInfo::conventional_chains() const –> const class utility::vector1<char, class std::allocator<char> > &

conventional_numbering(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_int¶: C++: core::pose::full_model_info::FullModelInfo::conventional_numbering() const –> const class utility::vector1<int, class std::allocator<int> > &

conventional_segids(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_string¶: C++: core::pose::full_model_info::FullModelInfo::conventional_segids() const –> const class utility::vector1<std::string, class std::allocator<std::string > > &

cutpoint_open_in_full_model(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::cutpoint_open_in_full_model() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

cyclize_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelInfo::cyclize_res() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

delete_submotif_info(*args, **kwargs)¶

Overloaded function.

delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str) -> None
delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, tag: str, seed: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const std::string &, const bool &) –> void

delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_list: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > >) –> void

delete_submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, submotif_info_op: core::pose::full_model_info::SubMotifInfo) -> None

C++: core::pose::full_model_info::FullModelInfo::delete_submotif_info(class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>) –> void

disulfide_pairs(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelInfo::disulfide_pairs() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

dock_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::dock_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

extra_minimize_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::extra_minimize_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

find_index_in_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → int¶: C++: core::pose::full_model_info::FullModelInfo::find_index_in_other_pose_list(const class core::pose::Pose &) const –> unsigned long

fiveprime_cap(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelInfo::fiveprime_cap() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

fixed_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::fixed_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → core::pose::full_model_info::FullModelParameters¶: C++: core::pose::full_model_info::FullModelInfo::full_model_parameters() const –> class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>

full_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → str¶: C++: core::pose::full_model_info::FullModelInfo::full_sequence() const –> const std::string &

full_to_sub(*args, **kwargs)¶

Overloaded function.

full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_in_full_model_numbering: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::full_to_sub(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_in_full_model_numbering: int) -> int

C++: core::pose::full_model_info::FullModelInfo::full_to_sub(const unsigned long) const –> unsigned long

full_to_sub(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> pyrosetta.rosetta.std.map_unsigned_long_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::full_to_sub() const –> class std::map<unsigned long, unsigned long, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, unsigned long> > >

get_idx_for_other_pose(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, pose: pyrosetta.rosetta.core.pose.Pose) → int¶: C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose(const class core::pose::Pose &) const –> unsigned long

get_idx_for_other_pose_with_residue(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, input_res: int) → int¶: C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose_with_residue(const unsigned long) const –> unsigned long

get_idx_for_other_pose_with_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, input_res: pyrosetta.rosetta.utility.vector1_unsigned_long) → int¶: C++: core::pose::full_model_info::FullModelInfo::get_idx_for_other_pose_with_residues(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> unsigned long

get_self_ptr(self: pyrosetta.rosetta.basic.datacache.CacheableData) → pyrosetta.rosetta.basic.datacache.CacheableData¶: C++: basic::datacache::CacheableData::get_self_ptr() –> class std::shared_ptr<class basic::datacache::CacheableData>

get_self_weak_ptr(self: pyrosetta.rosetta.basic.datacache.CacheableData) → pyrosetta.rosetta.std.weak_ptr_basic_datacache_CacheableData_t¶: C++: basic::datacache::CacheableData::get_self_weak_ptr() –> class std::weak_ptr<class basic::datacache::CacheableData>

global_mapping(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::global_mapping() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

global_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → str¶: C++: core::pose::full_model_info::FullModelInfo::global_sequence() const –> const std::string &

in_a_submotif(*args, **kwargs)¶

Overloaded function.

in_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
in_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::in_a_submotif(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

in_a_submotif_seed(*args, **kwargs)¶

Overloaded function.

in_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
in_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::in_a_submotif_seed(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

input_domain_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::input_domain_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

is_a_submotif(*args, **kwargs)¶

Overloaded function.

is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif() const –> bool

is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
is_a_submotif(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

is_a_submotif_seed(*args, **kwargs)¶

Overloaded function.

is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif_seed() const –> bool

is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> bool
is_a_submotif_seed(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> bool

C++: core::pose::full_model_info::FullModelInfo::is_a_submotif_seed(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> bool

jump_pairs(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelInfo::jump_pairs() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

jump_res_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::jump_res_map() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t¶: C++: core::pose::full_model_info::FullModelInfo::other_pose_list() const –> const class utility::vector1<class std::shared_ptr<class core::pose::Pose>, class std::allocator<class std::shared_ptr<class core::pose::Pose> > > &

preferred_root_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::preferred_root_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

remove_other_pose_at_idx(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, idx: int) → None¶: C++: core::pose::full_model_info::FullModelInfo::remove_other_pose_at_idx(const unsigned long) –> void

res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::res_list() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_anti_chi_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_anti_chi_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_block_stack_above_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_block_stack_above_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_block_stack_below_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_block_stack_below_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_bulge_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_bulge_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_sample_sugar_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_sample_sugar_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_syn_chi_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_syn_chi_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

rna_terminal_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::rna_terminal_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

sample_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::sample_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

set_full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, setting: core::pose::full_model_info::FullModelParameters) → None¶: C++: core::pose::full_model_info::FullModelInfo::set_full_model_parameters(class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>) –> void

set_other_pose_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, setting: pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_Pose_t) → None¶: C++: core::pose::full_model_info::FullModelInfo::set_other_pose_list(const class utility::vector1<class std::shared_ptr<class core::pose::Pose>, class std::allocator<class std::shared_ptr<class core::pose::Pose> > > &) –> void

set_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::FullModelInfo::set_res_list(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

show_submotif_info_list(*args, **kwargs)¶

Overloaded function.

show_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) -> None
show_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, for_all_poses: bool) -> None

C++: core::pose::full_model_info::FullModelInfo::show_submotif_info_list(const bool &) const –> void

size(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → int¶: C++: core::pose::full_model_info::FullModelInfo::size() const –> unsigned long

sub_to_full(*args, **kwargs)¶

Overloaded function.

sub_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelInfo::sub_to_full(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

sub_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res: int) -> int

C++: core::pose::full_model_info::FullModelInfo::sub_to_full(const unsigned long &) const –> unsigned long

submotif_info(*args, **kwargs)¶

Overloaded function.

submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> core::pose::full_model_info::SubMotifInfo
submotif_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> core::pose::full_model_info::SubMotifInfo

C++: core::pose::full_model_info::FullModelInfo::submotif_info(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

submotif_info_containing_residues(*args, **kwargs)¶

Overloaded function.

submotif_info_containing_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> core::pose::full_model_info::SubMotifInfo
submotif_info_containing_residues(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, check_other_poses: bool) -> core::pose::full_model_info::SubMotifInfo

C++: core::pose::full_model_info::FullModelInfo::submotif_info_containing_residues(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const bool &) const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_shared_ptr_core_pose_full_model_info_SubMotifInfo_t¶: C++: core::pose::full_model_info::FullModelInfo::submotif_info_list() const –> class utility::vector1<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>, class std::allocator<class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo> > > &

twoprime_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelInfo::twoprime_res() const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

update_submotif_info_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None¶: C++: core::pose::full_model_info::FullModelInfo::update_submotif_info_list() –> void

working_res(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelInfo::working_res() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

class pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType¶

Bases: pybind11_object

Members:

NO_TYPE

CALC_RMS

CUTPOINT_OPEN

DOCK_DOMAIN

EXTRA_MINIMIZE

EXTRA_MINIMIZE_JUMP

FIXED_DOMAIN

INPUT_DOMAIN

JUMP

PREFERRED_ROOT

SAMPLE

WORKING

CYCLIZE_RES

TWOPRIME_RES

RNA_BULGE

ALIGNMENT_ANCHOR_RES

RNA_SAMPLE_SUGAR

RNA_SYN_CHI

RNA_ANTI_CHI

RNA_NORTH_SUGAR

RNA_SOUTH_SUGAR

RNA_TERMINAL

RNA_BLOCK_STACK_ABOVE

RNA_BLOCK_STACK_BELOW

FIVEPRIME_CAP

DISULFIDE

LAST_TYPE

ALIGNMENT_ANCHOR_RES = <FullModelParameterType.ALIGNMENT_ANCHOR_RES: 15>¶

CALC_RMS = <FullModelParameterType.CALC_RMS: 1>¶

CUTPOINT_OPEN = <FullModelParameterType.CUTPOINT_OPEN: 2>¶

CYCLIZE_RES = <FullModelParameterType.CYCLIZE_RES: 12>¶

DISULFIDE = <FullModelParameterType.DISULFIDE: 25>¶

DOCK_DOMAIN = <FullModelParameterType.DOCK_DOMAIN: 3>¶

EXTRA_MINIMIZE = <FullModelParameterType.EXTRA_MINIMIZE: 4>¶

EXTRA_MINIMIZE_JUMP = <FullModelParameterType.EXTRA_MINIMIZE_JUMP: 5>¶

FIVEPRIME_CAP = <FullModelParameterType.FIVEPRIME_CAP: 24>¶

FIXED_DOMAIN = <FullModelParameterType.FIXED_DOMAIN: 6>¶

INPUT_DOMAIN = <FullModelParameterType.INPUT_DOMAIN: 7>¶

JUMP = <FullModelParameterType.JUMP: 8>¶

LAST_TYPE = <FullModelParameterType.LAST_TYPE: 26>¶

NO_TYPE = <FullModelParameterType.NO_TYPE: 0>¶

PREFERRED_ROOT = <FullModelParameterType.PREFERRED_ROOT: 9>¶

RNA_ANTI_CHI = <FullModelParameterType.RNA_ANTI_CHI: 18>¶

RNA_BLOCK_STACK_ABOVE = <FullModelParameterType.RNA_BLOCK_STACK_ABOVE: 22>¶

RNA_BLOCK_STACK_BELOW = <FullModelParameterType.RNA_BLOCK_STACK_BELOW: 23>¶

RNA_BULGE = <FullModelParameterType.RNA_BULGE: 14>¶

RNA_NORTH_SUGAR = <FullModelParameterType.RNA_NORTH_SUGAR: 19>¶

RNA_SAMPLE_SUGAR = <FullModelParameterType.RNA_SAMPLE_SUGAR: 16>¶

RNA_SOUTH_SUGAR = <FullModelParameterType.RNA_SOUTH_SUGAR: 20>¶

RNA_SYN_CHI = <FullModelParameterType.RNA_SYN_CHI: 17>¶

RNA_TERMINAL = <FullModelParameterType.RNA_TERMINAL: 21>¶

SAMPLE = <FullModelParameterType.SAMPLE: 10>¶

TWOPRIME_RES = <FullModelParameterType.TWOPRIME_RES: 13>¶

WORKING = <FullModelParameterType.WORKING: 11>¶

property name¶

property value¶

class pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters¶

Bases: pybind11_object

assign(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, : pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters¶: C++: core::pose::full_model_info::FullModelParameters::operator=(const class core::pose::full_model_info::FullModelParameters &) –> class core::pose::full_model_info::FullModelParameters &

chains_in_full_model(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelParameters::chains_in_full_model() const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

clone(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters¶: C++: core::pose::full_model_info::FullModelParameters::clone() const –> class std::shared_ptr<class core::pose::full_model_info::FullModelParameters>

conventional_chains(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_char¶: C++: core::pose::full_model_info::FullModelParameters::conventional_chains() const –> const class utility::vector1<char, class std::allocator<char> > &

conventional_numbering(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_int¶: C++: core::pose::full_model_info::FullModelParameters::conventional_numbering() const –> const class utility::vector1<int, class std::allocator<int> > &

conventional_segids(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_std_string¶: C++: core::pose::full_model_info::FullModelParameters::conventional_segids() const –> const class utility::vector1<std::string, class std::allocator<std::string > > &

conventional_to_full(*args, **kwargs)¶

Overloaded function.

conventional_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_list: pyrosetta.rosetta.utility.vector1_int) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelParameters::conventional_to_full(const class utility::vector1<int, class std::allocator<int> > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

conventional_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, resnum_and_chain_and_segid: Tuple[pyrosetta.rosetta.utility.vector1_int, pyrosetta.rosetta.utility.vector1_char, pyrosetta.rosetta.utility.vector1_std_string]) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelParameters::conventional_to_full(const class std::tuple<class utility::vector1<int, class std::allocator<int> >, class utility::vector1<char, class std::allocator<char> >, class utility::vector1<std::string, class std::allocator<std::string > > > &) const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

conventional_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int) -> int

C++: core::pose::full_model_info::FullModelParameters::conventional_to_full(const int) const –> unsigned long

conventional_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int, chain: str) -> int
conventional_to_full(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int, chain: str, segid: str) -> int

C++: core::pose::full_model_info::FullModelParameters::conventional_to_full(const int, const char, const std::string &) const –> unsigned long

cst_set(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → core::scoring::constraints::ConstraintSet¶: C++: core::pose::full_model_info::FullModelParameters::cst_set() const –> class std::shared_ptr<const class core::scoring::constraints::ConstraintSet>

cst_string(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → str¶: C++: core::pose::full_model_info::FullModelParameters::cst_string() const –> std::string

full_annotated_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → str¶: C++: core::pose::full_model_info::FullModelParameters::full_annotated_sequence() const –> std::string

full_model_pose_for_constraints(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.core.pose.Pose¶: C++: core::pose::full_model_info::FullModelParameters::full_model_pose_for_constraints() const –> const class core::pose::Pose &

full_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → str¶: C++: core::pose::full_model_info::FullModelParameters::full_sequence() const –> const std::string &

full_to_conventional(*args, **kwargs)¶

Overloaded function.

full_to_conventional(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> pyrosetta.rosetta.utility.vector1_int

C++: core::pose::full_model_info::FullModelParameters::full_to_conventional(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class utility::vector1<int, class std::allocator<int> >

full_to_conventional(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int) -> int

C++: core::pose::full_model_info::FullModelParameters::full_to_conventional(const unsigned long) const –> int

full_to_conventional_resnum_and_chain_and_segid(*args, **kwargs)¶

Overloaded function.

full_to_conventional_resnum_and_chain_and_segid(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> Tuple[pyrosetta.rosetta.utility.vector1_int, pyrosetta.rosetta.utility.vector1_char, pyrosetta.rosetta.utility.vector1_std_string]

C++: core::pose::full_model_info::FullModelParameters::full_to_conventional_resnum_and_chain_and_segid(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class std::tuple<class utility::vector1<int, class std::allocator<int> >, class utility::vector1<char, class std::allocator<char> >, class utility::vector1<std::string, class std::allocator<std::string > > >

full_to_conventional_resnum_and_chain_and_segid(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int) -> Tuple[int, str, str]

C++: core::pose::full_model_info::FullModelParameters::full_to_conventional_resnum_and_chain_and_segid(const unsigned long) const –> class std::tuple<int, char, std::string >

get_parameter(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelParameters::get_parameter(const enum core::pose::full_model_info::FullModelParameterType) const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

get_parameter_as_res_lists(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) → pyrosetta.rosetta.std.map_unsigned_long_utility_vector1_unsigned_long_std_allocator_unsigned_long_t_std_allocator_std_pair_const_unsigned_long_utility_vector1_unsigned_long_std_allocator_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelParameters::get_parameter_as_res_lists(const enum core::pose::full_model_info::FullModelParameterType) const –> const class std::map<unsigned long, class utility::vector1<unsigned long, class std::allocator<unsigned long> >, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > > &

get_res_list(*args, **kwargs)¶

Overloaded function.

get_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType, value: int) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelParameters::get_res_list(const enum core::pose::full_model_info::FullModelParameterType, const unsigned long) const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

get_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::FullModelParameters::get_res_list(const enum core::pose::full_model_info::FullModelParameterType) const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

get_res_list_as_pairs(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::FullModelParameters::get_res_list_as_pairs(const enum core::pose::full_model_info::FullModelParameterType) const –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

global_mapping(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelParameters::global_mapping() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

global_sequence(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → str¶: C++: core::pose::full_model_info::FullModelParameters::global_sequence() const –> const std::string &

has_conventional_residue(*args, **kwargs)¶

Overloaded function.

has_conventional_residue(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int) -> bool

C++: core::pose::full_model_info::FullModelParameters::has_conventional_residue(const int) const –> bool

has_conventional_residue(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int, chain: str) -> bool
has_conventional_residue(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, res_num: int, chain: str, segid: str) -> bool

C++: core::pose::full_model_info::FullModelParameters::has_conventional_residue(const int, const char, const std::string &) const –> bool

non_standard_residue_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.std.map_unsigned_long_std_string¶: C++: core::pose::full_model_info::FullModelParameters::non_standard_residue_map() const –> const class std::map<unsigned long, std::string, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, std::string > > > &

non_standard_residue_map_nonconst(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.std.map_unsigned_long_std_string¶: C++: core::pose::full_model_info::FullModelParameters::non_standard_residue_map_nonconst() –> class std::map<unsigned long, std::string, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, std::string > > > &

parent_full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters¶: C++: core::pose::full_model_info::FullModelParameters::parent_full_model_parameters() const –> class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>

read_cst_file(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, cst_file: str) → None¶: C++: core::pose::full_model_info::FullModelParameters::read_cst_file(const std::string &) –> void

read_disulfides(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, disulfide_file: str) → None¶: C++: core::pose::full_model_info::FullModelParameters::read_disulfides(const std::string &) –> void

read_global_seq_info(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, global_seq_file: str) → None¶: C++: core::pose::full_model_info::FullModelParameters::read_global_seq_info(const std::string &) –> void

set_conventional_chains(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.utility.vector1_char) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_conventional_chains(const class utility::vector1<char, class std::allocator<char> > &) –> void

set_conventional_numbering(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.utility.vector1_int) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_conventional_numbering(const class utility::vector1<int, class std::allocator<int> > &) –> void

set_conventional_segids(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.utility.vector1_std_string) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_conventional_segids(const class utility::vector1<std::string, class std::allocator<std::string > > &) –> void

set_cst_string(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: str) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_cst_string(const std::string &) –> void

set_non_standard_residue_map(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.std.map_unsigned_long_std_string) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_non_standard_residue_map(const class std::map<unsigned long, std::string, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, std::string > > > &) –> void

set_parameter(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType, setting: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_parameter(const enum core::pose::full_model_info::FullModelParameterType, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

set_parameter_as_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType, setting: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_parameter_as_res_list(const enum core::pose::full_model_info::FullModelParameterType, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

set_parameter_as_res_list_in_pairs(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType, setting: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_parameter_as_res_list_in_pairs(const enum core::pose::full_model_info::FullModelParameterType, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

set_parameter_as_res_lists(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType, setting: pyrosetta.rosetta.std.map_unsigned_long_utility_vector1_unsigned_long_std_allocator_unsigned_long_t_std_allocator_std_pair_const_unsigned_long_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_parameter_as_res_lists(const enum core::pose::full_model_info::FullModelParameterType, const class std::map<unsigned long, class utility::vector1<unsigned long, class std::allocator<unsigned long> >, struct std::less<unsigned long>, class std::allocator<struct std::pair<const unsigned long, class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > > &) –> void

set_parent_full_model_parameters(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_parent_full_model_parameters(class std::shared_ptr<const class core::pose::full_model_info::FullModelParameters>) –> void

set_slice_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, setting: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::FullModelParameters::set_slice_res_list(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

size(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → int¶: C++: core::pose::full_model_info::FullModelParameters::size() const –> unsigned long

slice(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, slice_res: pyrosetta.rosetta.utility.vector1_unsigned_long) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters¶: C++: core::pose::full_model_info::FullModelParameters::slice(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) const –> class std::shared_ptr<class core::pose::full_model_info::FullModelParameters>

slice_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::FullModelParameters::slice_res_list() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

update_pose_and_cst_set_from_cst_string(self: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameters, rsd_type_set: pyrosetta.rosetta.core.chemical.ResidueTypeSet) → None¶: C++: core::pose::full_model_info::FullModelParameters::update_pose_and_cst_set_from_cst_string(const class core::chemical::ResidueTypeSet &) const –> void

class pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo¶

Bases: pybind11_object

Keep track of information about a submotif added to a pose.

assign(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, : pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) → pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo¶: C++: core::pose::full_model_info::SubMotifInfo::operator=(const class core::pose::full_model_info::SubMotifInfo &) –> class core::pose::full_model_info::SubMotifInfo &

clone(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) → pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo¶: C++: core::pose::full_model_info::SubMotifInfo::clone() const –> class std::shared_ptr<class core::pose::full_model_info::SubMotifInfo>

res_list(*args, **kwargs)¶

Overloaded function.

res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::SubMotifInfo::res_list() const –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, index: int) -> int

C++: core::pose::full_model_info::SubMotifInfo::res_list(const unsigned long &) const –> const unsigned long &

res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long) -> None

C++: core::pose::full_model_info::SubMotifInfo::res_list(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void

seed(*args, **kwargs)¶

Overloaded function.

seed(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> bool

C++: core::pose::full_model_info::SubMotifInfo::seed() const –> const bool &

seed(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, seed: bool) -> None

C++: core::pose::full_model_info::SubMotifInfo::seed(const bool &) –> void

sorted_res_list(*args, **kwargs)¶

Overloaded function.

sorted_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::SubMotifInfo::sorted_res_list() const –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

sorted_res_list(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, index: int) -> int

C++: core::pose::full_model_info::SubMotifInfo::sorted_res_list(const unsigned long &) –> unsigned long

tag(*args, **kwargs)¶

Overloaded function.

tag(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo) -> str

C++: core::pose::full_model_info::SubMotifInfo::tag() const –> const std::string &

tag(self: pyrosetta.rosetta.core.pose.full_model_info.SubMotifInfo, tag: str) -> None

C++: core::pose::full_model_info::SubMotifInfo::tag(const std::string &) –> void

pyrosetta.rosetta.core.pose.full_model_info.add_new_sequence_into_global_sequence(pose: pyrosetta.rosetta.core.pose.Pose, current_global_sequence: str) → None¶: C++: core::pose::full_model_info::add_new_sequence_into_global_sequence(const class core::pose::Pose &, std::string &) –> void

pyrosetta.rosetta.core.pose.full_model_info.append_virtual_residue_to_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::append_virtual_residue_to_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.check_all_residues_sampled(pose: pyrosetta.rosetta.core.pose.Pose) → bool¶: C++: core::pose::full_model_info::check_all_residues_sampled(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.check_full_model_info_OK(pose: pyrosetta.rosetta.core.pose.Pose) → bool¶: C++: core::pose::full_model_info::check_full_model_info_OK(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.check_sample_sugar_in_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose, i: int) → bool¶: C++: core::pose::full_model_info::check_sample_sugar_in_full_model_info(const class core::pose::Pose &, const unsigned long) –> bool

pyrosetta.rosetta.core.pose.full_model_info.const_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶: C++: core::pose::full_model_info::const_full_model_info(const class core::pose::Pose &) –> const class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.figure_out_chain_numbers_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::figure_out_chain_numbers_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_chain_numbers_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::figure_out_chain_numbers_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_conventional_chains_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_char¶: C++: core::pose::full_model_info::figure_out_conventional_chains_from_full_model_info(const class core::pose::Pose &) –> class utility::vector1<char, class std::allocator<char> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_conventional_segids_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_std_string¶: C++: core::pose::full_model_info::figure_out_conventional_segids_from_full_model_info(const class core::pose::Pose &) –> class utility::vector1<std::string, class std::allocator<std::string > >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_dock_domain_map_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::figure_out_dock_domain_map_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_pose_domain_map(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::figure_out_pose_domain_map(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.figure_out_pose_domain_map_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::figure_out_pose_domain_map_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.full_model_info_defined(pose: pyrosetta.rosetta.core.pose.Pose) → bool¶: C++: core::pose::full_model_info::full_model_info_defined(const class core::pose::Pose &) –> bool

pyrosetta.rosetta.core.pose.full_model_info.full_model_parameter_type_from_string(name: str) → pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType¶: C++: core::pose::full_model_info::full_model_parameter_type_from_string(const std::string &) –> enum core::pose::full_model_info::FullModelParameterType

pyrosetta.rosetta.core.pose.full_model_info.full_model_size(pose: pyrosetta.rosetta.core.pose.Pose) → int¶: C++: core::pose::full_model_info::full_model_size(class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.full_to_sub(*args, **kwargs)¶

Overloaded function.

full_to_sub(i: int, pose: pyrosetta.rosetta.core.pose.Pose) -> int

C++: core::pose::full_model_info::full_to_sub(const unsigned long, const class core::pose::Pose &) –> unsigned long

full_to_sub(res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, pose: pyrosetta.rosetta.core.pose.Pose) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::full_to_sub(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_chain_connections(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t¶: C++: core::pose::full_model_info::get_chain_connections(const class core::pose::Pose &) –> class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > >

pyrosetta.rosetta.core.pose.full_model_info.get_chain_for_full_model_resnum(resnum: int, pose: pyrosetta.rosetta.core.pose.Pose) → int¶: C++: core::pose::full_model_info::get_chain_for_full_model_resnum(const unsigned long &, const class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_chain_for_resnum(resnum: int, pose: pyrosetta.rosetta.core.pose.Pose) → int¶: C++: core::pose::full_model_info::get_chain_for_resnum(const unsigned long &, const class core::pose::Pose &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_chains_from_cutpoint_open(cutpoint_open: pyrosetta.rosetta.utility.vector1_unsigned_long, nres: int) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_chains_from_cutpoint_open(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const unsigned long) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_chains_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_char¶: C++: core::pose::full_model_info::get_chains_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<char, class std::allocator<char> >

pyrosetta.rosetta.core.pose.full_model_info.get_chains_full(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_chains_full(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_connection_domains(chain_connections: pyrosetta.rosetta.utility.vector1_std_pair_unsigned_long_unsigned_long_t, nchains: int) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_connection_domains(const class utility::vector1<struct std::pair<unsigned long, unsigned long>, class std::allocator<struct std::pair<unsigned long, unsigned long> > > &, const unsigned long) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_current_global_sequence(*args, **kwargs)¶

Overloaded function.

get_current_global_sequence(pose: pyrosetta.rosetta.core.pose.Pose) -> str

C++: core::pose::full_model_info::get_current_global_sequence(const class core::pose::Pose &) –> std::string

get_current_global_sequence(resvect: pyrosetta.rosetta.utility.vector1_std_shared_ptr_const_core_conformation_Residue_t, global_mapping: pyrosetta.rosetta.utility.vector1_unsigned_long, res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, native_sequence: str) -> str

C++: core::pose::full_model_info::get_current_global_sequence(const class utility::vector1<class std::shared_ptr<const class core::conformation::Residue>, class std::allocator<class std::shared_ptr<const class core::conformation::Residue> > > &, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const std::string &) –> std::string

pyrosetta.rosetta.core.pose.full_model_info.get_cutpoint_open_from_chains(chains: pyrosetta.rosetta.utility.vector1_unsigned_long) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_cutpoint_open_from_chains(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_fixed_domain_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_fixed_domain_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_input_domain_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_input_domain_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_move_elements_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t¶: C++: core::pose::full_model_info::get_move_elements_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > >

pyrosetta.rosetta.core.pose.full_model_info.get_move_elements_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t¶: C++: core::pose::full_model_info::get_move_elements_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > >

pyrosetta.rosetta.core.pose.full_model_info.get_moving_res_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_moving_res_from_full_model_info(class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_moving_res_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_moving_res_from_full_model_info_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_number_missing_residues_and_connections(*args, **kwargs)¶

Overloaded function.

get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The pose is passed by nonconst reference, so that the full_model_info can be setup, if needed.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(class core::pose::Pose &) –> unsigned long

get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose) -> int

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &) –> unsigned long

get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, missing_residues: pyrosetta.rosetta.utility.vector1_char) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The missing_residues vector is passed by nonconst reference, so its values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<char, class std::allocator<char> > &) –> unsigned long

get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, loop_suites: pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The loop_suites vector is passed by nonconst reference, so its values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > &) –> unsigned long

get_number_missing_residues_and_connections(pose: pyrosetta.rosetta.core.pose.Pose, missing_residues: pyrosetta.rosetta.utility.vector1_char, loop_suites: pyrosetta.rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) -> int

Finds the number of missing residues in a pose.

This function returns the number of missing residues in the pose. The missing_res and loop_suites vectors are passed by nonconst reference, so their values can be modified and accessed by this function and the calling method.

C++: core::pose::full_model_info::get_number_missing_residues_and_connections(const class core::pose::Pose &, class utility::vector1<char, class std::allocator<char> > &, class utility::vector1<class utility::vector1<unsigned long, class std::allocator<unsigned long> >, class std::allocator<class utility::vector1<unsigned long, class std::allocator<unsigned long> > > > &) –> unsigned long

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_res_list_const(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_res_list_from_full_model_info(class core::pose::Pose &) –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

pyrosetta.rosetta.core.pose.full_model_info.get_res_list_from_full_model_info_const(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_res_list_from_full_model_info_const(const class core::pose::Pose &) –> const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &

pyrosetta.rosetta.core.pose.full_model_info.get_res_num_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_int¶: C++: core::pose::full_model_info::get_res_num_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<int, class std::allocator<int> >

pyrosetta.rosetta.core.pose.full_model_info.get_residue(seqpos_in_full_model: int, pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.conformation.Residue¶: C++: core::pose::full_model_info::get_residue(const unsigned long, const class core::pose::Pose &) –> const class core::conformation::Residue &

pyrosetta.rosetta.core.pose.full_model_info.get_sample_res_for_pose(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_unsigned_long¶: C++: core::pose::full_model_info::get_sample_res_for_pose(const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.get_segids_from_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.utility.vector1_std_string¶: C++: core::pose::full_model_info::get_segids_from_pdb_info(const class core::pose::Pose &) –> class utility::vector1<std::string, class std::allocator<std::string > >

pyrosetta.rosetta.core.pose.full_model_info.initialize_parameters(full_model_parameters: core::pose::full_model_info::FullModelParameters) → None¶: C++: core::pose::full_model_info::initialize_parameters(class core::pose::full_model_info::FullModelParameters &) –> void

pyrosetta.rosetta.core.pose.full_model_info.make_sure_full_model_info_is_setup(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶: C++: core::pose::full_model_info::make_sure_full_model_info_is_setup(class core::pose::Pose &) –> const class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.nonconst_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo¶: C++: core::pose::full_model_info::nonconst_full_model_info(class core::pose::Pose &) –> class core::pose::full_model_info::FullModelInfo &

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_append(*args, **kwargs)¶

Overloaded function.

reorder_full_model_info_after_append(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int) -> None
reorder_full_model_info_after_append(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int, offset: int) -> None

C++: core::pose::full_model_info::reorder_full_model_info_after_append(class core::pose::Pose &, const unsigned long, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_delete(pose: pyrosetta.rosetta.core.pose.Pose, res_to_delete: int) → None¶: Keep track of RNA centroid information inside the pose.

C++: core::pose::full_model_info::reorder_full_model_info_after_delete(class core::pose::Pose &, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.reorder_full_model_info_after_prepend(*args, **kwargs)¶

Overloaded function.

reorder_full_model_info_after_prepend(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int) -> None
reorder_full_model_info_after_prepend(pose: pyrosetta.rosetta.core.pose.Pose, res_to_add: int, offset: int) -> None

C++: core::pose::full_model_info::reorder_full_model_info_after_prepend(class core::pose::Pose &, const unsigned long, const unsigned long) –> void

pyrosetta.rosetta.core.pose.full_model_info.set_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose, full_model_info: pyrosetta.rosetta.core.pose.full_model_info.FullModelInfo) → None¶: C++: core::pose::full_model_info::set_full_model_info(class core::pose::Pose &, class std::shared_ptr<class core::pose::full_model_info::FullModelInfo> &) –> void

pyrosetta.rosetta.core.pose.full_model_info.sub_to_full(*args, **kwargs)¶

Overloaded function.

sub_to_full(i: int, pose: pyrosetta.rosetta.core.pose.Pose) -> int

C++: core::pose::full_model_info::sub_to_full(const unsigned long, const class core::pose::Pose &) –> unsigned long

sub_to_full(res_list: pyrosetta.rosetta.utility.vector1_unsigned_long, pose: pyrosetta.rosetta.core.pose.Pose) -> pyrosetta.rosetta.utility.vector1_unsigned_long

C++: core::pose::full_model_info::sub_to_full(const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &, const class core::pose::Pose &) –> class utility::vector1<unsigned long, class std::allocator<unsigned long> >

pyrosetta.rosetta.core.pose.full_model_info.to_string(type: pyrosetta.rosetta.core.pose.full_model_info.FullModelParameterType) → str¶: C++: core::pose::full_model_info::to_string(const enum core::pose::full_model_info::FullModelParameterType &) –> std::string

pyrosetta.rosetta.core.pose.full_model_info.update_constraint_set_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::update_constraint_set_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_disulfides_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::update_disulfides_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_full_model_info_from_pose(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::update_full_model_info_from_pose(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_pdb_info_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::update_pdb_info_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_pose_objects_from_full_model_info(pose: pyrosetta.rosetta.core.pose.Pose) → None¶: C++: core::pose::full_model_info::update_pose_objects_from_full_model_info(class core::pose::Pose &) –> void

pyrosetta.rosetta.core.pose.full_model_info.update_res_list_in_full_model_info_and_pdb_info(pose: pyrosetta.rosetta.core.pose.Pose, res_list_new: pyrosetta.rosetta.utility.vector1_unsigned_long) → None¶: C++: core::pose::full_model_info::update_res_list_in_full_model_info_and_pdb_info(class core::pose::Pose &, const class utility::vector1<unsigned long, class std::allocator<unsigned long> > &) –> void