Bindings for protocols::denovo_design::connection namespace

Classes
		builtins.object AreConnectablePredicate rosetta.protocols.denovo_design.architects.StructureArchitect(builtins.object) ConnectionArchitect rosetta.utility.excn.EXCN_Base(builtins.object) EXCN_ConnectionSetupFailed   class AreConnectablePredicate(builtins.object)       Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.protocols.denovo_design.connection.AreConnectablePredicate, sd : rosetta.protocols.denovo_design.components.StructureData, motif : rosetta.protocols.denovo_design.components.Segment) -> bool __init__(...) from builtins.PyCapsule __init__(self : handle, allow_cyclic : bool) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.protocols.denovo_design.connection.AreConnectablePredicate,  : rosetta.protocols.denovo_design.connection.AreConnectablePredicate) -> rosetta.protocols.denovo_design.connection.AreConnectablePredicate   class ConnectionArchitect(rosetta.protocols.denovo_design.architects.StructureArchitect)     Architect for covalently joining two segments of a pose     Method resolution order: ConnectionArchitect rosetta.protocols.denovo_design.architects.StructureArchitect builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(self : handle, id_value : str) -> NoneType   2. __init__(handle, rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(*args, **kwargs) Overloaded function.   1. apply(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, sd : rosetta.protocols.denovo_design.components.StructureData) -> NoneType   does the work of modifying the StructureData   2. apply(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, sd : rosetta.protocols.denovo_design.components.StructureData, random : float) -> NoneType   applies with a specific random number assign(...) from builtins.PyCapsule assign(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect,  : rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> rosetta.protocols.denovo_design.connection.ConnectionArchitect class_name(...) from builtins.PyCapsule class_name() -> str clone(...) from builtins.PyCapsule clone(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> rosetta.protocols.denovo_design.connection.ConnectionArchitect segment1_ids(...) from builtins.PyCapsule segment1_ids(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> rosetta.std.vector_std_string   returns list of allowed segment 1 ids segment2_ids(...) from builtins.PyCapsule segment2_ids(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> rosetta.std.vector_std_string   returns list of allowed segment2 ids set_motifs(...) from builtins.PyCapsule set_motifs(*args, **kwargs) Overloaded function.   1. set_motifs(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, motif_str : str, cutpoints_str : str) -> NoneType   sets motifs using a motif string and a string of cutpoints   2. set_motifs(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, motifs : rosetta.utility.vector1_std_shared_ptr_const_protocols_denovo_design_components_Segment_t) -> NoneType   sets motifs via a vector set_segment1_ids(...) from builtins.PyCapsule set_segment1_ids(*args, **kwargs) Overloaded function.   1. set_segment1_ids(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, segment1_str : str) -> NoneType   sets list of segment1 ids from string   2. set_segment1_ids(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, segments : rosetta.std.vector_std_string) -> NoneType   sets list of segment1 ids from list set_segment2_ids(...) from builtins.PyCapsule set_segment2_ids(*args, **kwargs) Overloaded function.   1. set_segment2_ids(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, segment2_str : str) -> NoneType   sets list of segment2 ids from string   2. set_segment2_ids(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, segments : rosetta.std.vector_std_string) -> NoneType   sets list of segment1 ids from list set_user_chain1(...) from builtins.PyCapsule set_user_chain1(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, chain : int) -> NoneType   sets user-specified chain number for the lower chain to be connected. 0 if unspecified set_user_chain2(...) from builtins.PyCapsule set_user_chain2(self : rosetta.protocols.denovo_design.connection.ConnectionArchitect, chain : int) -> NoneType   sets user-specified chain number for the upper chain to be connected. 0 if unspecified type(...) from builtins.PyCapsule type(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> str user_chain1(...) from builtins.PyCapsule user_chain1(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> int   gets user-specified chain number for the lower chain to be connected. 0 if not specified user_chain2(...) from builtins.PyCapsule user_chain2(rosetta.protocols.denovo_design.connection.ConnectionArchitect) -> int   gets user-specified chain number for the upper chain to be connected. 0 if not specified Methods inherited from rosetta.protocols.denovo_design.architects.StructureArchitect: id(...) from builtins.PyCapsule id(rosetta.protocols.denovo_design.architects.StructureArchitect) -> str parse_my_tag(...) from builtins.PyCapsule parse_my_tag(self : rosetta.protocols.denovo_design.architects.StructureArchitect, tag : rosetta.utility.tag.Tag, data : rosetta.basic.datacache.DataMap) -> NoneType set_id(...) from builtins.PyCapsule set_id(self : rosetta.protocols.denovo_design.architects.StructureArchitect, new_id : str) -> NoneType   class EXCN_ConnectionSetupFailed(rosetta.utility.excn.EXCN_Base)       Method resolution order: EXCN_ConnectionSetupFailed rosetta.utility.excn.EXCN_Base builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(self : handle, msg : str) -> NoneType   2. __init__(handle, rosetta.protocols.denovo_design.connection.EXCN_ConnectionSetupFailed) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. message(...) from builtins.PyCapsule message(rosetta.protocols.denovo_design.connection.EXCN_ConnectionSetupFailed) -> str Methods inherited from rosetta.utility.excn.EXCN_Base: __str__(...) from builtins.PyCapsule __str__(rosetta.utility.excn.EXCN_Base) -> str assign(...) from builtins.PyCapsule assign(self : rosetta.utility.excn.EXCN_Base,  : rosetta.utility.excn.EXCN_Base) -> rosetta.utility.excn.EXCN_Base msg(...) from builtins.PyCapsule msg(rosetta.utility.excn.EXCN_Base) -> str

Functions
		parse_segment_names(...) method of builtins.PyCapsule instance parse_segment_names(segment_name_str : str) -> rosetta.std.vector_std_string