initialization

pyrosetta.distributed.cluster.initialization._get_pyrosetta_init_args() → List[str]

Return a list object representing pyrosetta.init parameters.

pyrosetta.distributed.cluster.initialization._get_residue_type_set_name3() → Set[str]

Return a set object of str objects for the 3-letter names of residues currently loaded in Rosetta.

pyrosetta.distributed.cluster.initialization._maybe_init_client() → None

Initialize PyRosetta if it has not been initialized, otherwise confirm that PyRosetta was initialized with a constant seed.

pyrosetta.distributed.cluster.initialization._maybe_relativize(option_name: str = '__no__default__', value: str = '__no__default__', start: str = '__no__default__', ignore_errors: bool = '__no__default__') → str

Relativize a str object if it exists as a filesystem path.

pyrosetta.distributed.cluster.initialization._get_norm_task_options(ignore_errors: bool) → Dict[str, str]

Get normalized Rosetta command-line options for a task dictionary.