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- builtins.object
-
- VIP_Mover
- VIP_Report
class VIP_Mover(builtins.object) |
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Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(rosetta.protocols.vip.VIP_Mover) -> NoneType
2. __init__(self : rosetta.protocols.vip.VIP_Mover, : rosetta.core.pose.Pose, : rosetta.core.pose.Pose, : rosetta.core.pose.Pose, : rosetta.core.pose.Pose, : rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t, : rosetta.utility.vector1_unsigned_long, : rosetta.utility.vector1_double, : rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t, : rosetta.utility.vector1_unsigned_long, : rosetta.utility.vector1_double, : int, : rosetta.utility.vector1_unsigned_long, : rosetta.utility.vector1_std_string, : rosetta.utility.vector1_unsigned_long, : rosetta.utility.vector1_unsigned_long, : float) -> NoneType
3. __init__(self : rosetta.protocols.vip.VIP_Mover, : rosetta.protocols.vip.VIP_Mover) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- apply(...) from builtins.PyCapsule
- apply(rosetta.protocols.vip.VIP_Mover) -> NoneType
- apply_holes(...) from builtins.PyCapsule
- apply_holes(rosetta.protocols.vip.VIP_Mover) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.vip.VIP_Mover, : rosetta.protocols.vip.VIP_Mover) -> rosetta.protocols.vip.VIP_Mover
- compute_number_cavities(...) from builtins.PyCapsule
- compute_number_cavities(rosetta.protocols.vip.VIP_Mover) -> NoneType
- cranny_packer(...) from builtins.PyCapsule
- cranny_packer(rosetta.protocols.vip.VIP_Mover) -> NoneType
- cull_mutatable_residues(...) from builtins.PyCapsule
- cull_mutatable_residues(rosetta.protocols.vip.VIP_Mover) -> NoneType
- dump_pdb_to_file(...) from builtins.PyCapsule
- dump_pdb_to_file(self : rosetta.protocols.vip.VIP_Mover, : rosetta.core.pose.Pose, : str) -> NoneType
- get_cav_approx(...) from builtins.PyCapsule
- get_cav_approx(self : rosetta.protocols.vip.VIP_Mover, : int) -> float
- get_cavity_positions(...) from builtins.PyCapsule
- get_cavity_positions(rosetta.protocols.vip.VIP_Mover) -> NoneType
- get_final_energy(...) from builtins.PyCapsule
- get_final_energy(rosetta.protocols.vip.VIP_Mover) -> float
- get_final_pose(...) from builtins.PyCapsule
- get_final_pose(rosetta.protocols.vip.VIP_Mover) -> rosetta.core.pose.Pose
- get_neighbors(...) from builtins.PyCapsule
- get_neighbors(rosetta.protocols.vip.VIP_Mover) -> NoneType
- get_unrelaxed_pose(...) from builtins.PyCapsule
- get_unrelaxed_pose(rosetta.protocols.vip.VIP_Mover) -> rosetta.core.pose.Pose
- iteration(...) from builtins.PyCapsule
- iteration(rosetta.protocols.vip.VIP_Mover) -> int
- minimize_conformation(...) from builtins.PyCapsule
- minimize_conformation(rosetta.protocols.vip.VIP_Mover) -> NoneType
- nook_finder(...) from builtins.PyCapsule
- nook_finder(rosetta.protocols.vip.VIP_Mover) -> NoneType
- print_pack_report(...) from builtins.PyCapsule
- print_pack_report(rosetta.protocols.vip.VIP_Mover) -> NoneType
- print_relax_report(...) from builtins.PyCapsule
- print_relax_report(rosetta.protocols.vip.VIP_Mover) -> NoneType
- relax_favorable_poses(...) from builtins.PyCapsule
- relax_favorable_poses(rosetta.protocols.vip.VIP_Mover) -> NoneType
- set_energy_to_beat(...) from builtins.PyCapsule
- set_energy_to_beat(self : rosetta.protocols.vip.VIP_Mover, in_value : float) -> NoneType
- set_excluded_positions(...) from builtins.PyCapsule
- set_excluded_positions(rosetta.protocols.vip.VIP_Mover) -> NoneType
- set_initial_pose(...) from builtins.PyCapsule
- set_initial_pose(self : rosetta.protocols.vip.VIP_Mover, : rosetta.core.pose.Pose) -> NoneType
- set_iteration(...) from builtins.PyCapsule
- set_iteration(self : rosetta.protocols.vip.VIP_Mover, it : int) -> NoneType
- set_use_stored_energy(...) from builtins.PyCapsule
- set_use_stored_energy(self : rosetta.protocols.vip.VIP_Mover, in_value : bool) -> NoneType
- skip_relax(...) from builtins.PyCapsule
- skip_relax(rosetta.protocols.vip.VIP_Mover) -> NoneType
- sort_fill_energies(...) from builtins.PyCapsule
- sort_fill_energies(rosetta.protocols.vip.VIP_Mover) -> NoneType
- sort_relaxed_poses(...) from builtins.PyCapsule
- sort_relaxed_poses(rosetta.protocols.vip.VIP_Mover) -> NoneType
- try_point_mutants(...) from builtins.PyCapsule
- try_point_mutants(rosetta.protocols.vip.VIP_Mover) -> NoneType
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class VIP_Report(builtins.object) |
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Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(rosetta.protocols.vip.VIP_Report) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.vip.VIP_Report, : rosetta.protocols.vip.VIP_Report) -> rosetta.protocols.vip.VIP_Report
- get_GOE_packstat_report(...) from builtins.PyCapsule
- get_GOE_packstat_report(self : rosetta.protocols.vip.VIP_Report, goe_native : rosetta.core.pose.Pose, goe_relax : rosetta.utility.vector1_core_pose_Pose) -> NoneType
- get_GOE_relaxed_report(...) from builtins.PyCapsule
- get_GOE_relaxed_report(self : rosetta.protocols.vip.VIP_Report, goe_native : rosetta.core.pose.Pose, goe_repack_e : rosetta.utility.vector1_double, goe_repack_res : rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t, goe_repack_pos : rosetta.utility.vector1_unsigned_long, it : int, use_stored : bool, stored_e : float) -> NoneType
- get_GOE_repack_report(...) from builtins.PyCapsule
- get_GOE_repack_report(self : rosetta.protocols.vip.VIP_Report, goe_native : rosetta.core.pose.Pose, goe_repack_e : rosetta.utility.vector1_double, goe_repack_res : rosetta.utility.vector1_std_shared_ptr_core_conformation_Residue_t, goe_repack_pos : rosetta.utility.vector1_unsigned_long, it : int, use_stored : bool, stored_e : float) -> NoneType
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