rosetta.protocols.trajectory
index
(built-in)

Bindings for protocols::trajectory namespace

 
Classes
       
builtins.object
DbTrajectoryReader
DbTrajectoryWriter

 
class DbTrajectoryReader(builtins.object)
     Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.protocols.trajectory.DbTrajectoryReader) -> NoneType
 
2. __init__(self : rosetta.protocols.trajectory.DbTrajectoryReader, job_id : int) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
get_iterations(...) from builtins.PyCapsule
get_iterations(rosetta.protocols.trajectory.DbTrajectoryReader) -> rosetta.utility.vector1_unsigned_long
 
Return a vector listing every iteration recorded for this job.
get_num_iterations(...) from builtins.PyCapsule
get_num_iterations(rosetta.protocols.trajectory.DbTrajectoryReader) -> int
 
Return the number of iterations that were recorded for this job.
get_pose(...) from builtins.PyCapsule
get_pose(self : rosetta.protocols.trajectory.DbTrajectoryReader, iteration : int) -> rosetta.core.pose.Pose
 
Return the pose recorded for the given iteration.
get_poses(...) from builtins.PyCapsule
get_poses(rosetta.protocols.trajectory.DbTrajectoryReader) -> rosetta.utility.vector1_core_pose_Pose
 
Return all the poses contained in this trajectory.
set_job_id(...) from builtins.PyCapsule
set_job_id(self : rosetta.protocols.trajectory.DbTrajectoryReader, job_id : int) -> NoneType
 
Set the job id.  This controls which records are selected.

 
class DbTrajectoryWriter(builtins.object)
     Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.protocols.trajectory.DbTrajectoryWriter, int, rosetta.core.pose.Pose) -> NoneType
 
doc
 
2. __init__(rosetta.protocols.trajectory.DbTrajectoryWriter, int, rosetta.core.pose.Pose, int) -> NoneType
 
doc
 
3. __init__(self : rosetta.protocols.trajectory.DbTrajectoryWriter, job_id : int, pose : rosetta.core.pose.Pose, frequency : int, cache_limit : int) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
finalize(...) from builtins.PyCapsule
finalize(rosetta.protocols.trajectory.DbTrajectoryWriter) -> NoneType
 
Make sure any cached poses have been saved.
set_cache_limit(...) from builtins.PyCapsule
set_cache_limit(self : rosetta.protocols.trajectory.DbTrajectoryWriter, setting : int) -> NoneType
 
Specify the number of poses that can be cached.
set_frequency(...) from builtins.PyCapsule
set_frequency(self : rosetta.protocols.trajectory.DbTrajectoryWriter, setting : int) -> NoneType
 
Specify that a pose should be saved once every N iterations.
update(...) from builtins.PyCapsule
update(self : rosetta.protocols.trajectory.DbTrajectoryWriter, pose : rosetta.core.pose.Pose) -> NoneType
 
Add the given pose to the trajectory being saved.