|        |   | 
- builtins.object
 - 
- PhosphateMove
 - PhosphateTerminus
  
 
- rosetta.protocols.moves.Mover(builtins.object)
 - 
- MultiPhosphateSampler
 - PhosphateMover
  
 
 
 
 
  
class MultiPhosphateSampler(rosetta.protocols.moves.Mover) |  
    
|     |   | 
- Method resolution order:
 
- MultiPhosphateSampler
 
- rosetta.protocols.moves.Mover
 
- builtins.object
 
 
 
Methods defined here: 
- __init__(...) from builtins.PyCapsule
 - __init__(*args, **kwargs)
 
Overloaded function. 
  
1. __init__(self : handle, reference_pose : rosetta.core.pose.Pose) -> NoneType 
  
2. __init__(self : handle, pose_to_prepack : rosetta.core.pose.Pose, moving_res : int) -> NoneType 
  
3. __init__(handle, rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> NoneType  
- __new__(*args, **kwargs) from builtins.type
 - Create and return a new object.  See help(type) for accurate signature.
  
- apply(...) from builtins.PyCapsule
 - apply(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, pose : rosetta.core.pose.Pose) -> NoneType
  
- assign(...) from builtins.PyCapsule
 - assign(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler,  : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler
  
- clone(...) from builtins.PyCapsule
 - clone(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.protocols.moves.Mover
  
- clone_sampler(...) from builtins.PyCapsule
 - clone_sampler(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler
  
- copy_phosphates(...) from builtins.PyCapsule
 - copy_phosphates(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, mod_pose : rosetta.core.pose.Pose) -> NoneType
  
- do_prepack(...) from builtins.PyCapsule
 - do_prepack(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, pose : rosetta.core.pose.Pose, moving_res_list : rosetta.utility.vector1_unsigned_long) -> NoneType
  
- force_phosphate_instantiation(...) from builtins.PyCapsule
 - force_phosphate_instantiation(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> bool
  
- get_name(...) from builtins.PyCapsule
 - get_name(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> str
  
- get_scorefxn(...) from builtins.PyCapsule
 - get_scorefxn(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.core.scoring.ScoreFunction
  
- initialize_by_prepack(...) from builtins.PyCapsule
 - initialize_by_prepack(*args, **kwargs)
 
Overloaded function. 
  
1. initialize_by_prepack(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, pose : rosetta.core.pose.Pose, moving_res : int) -> NoneType 
  
2. initialize_by_prepack(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, pose : rosetta.core.pose.Pose, moving_res_list : rosetta.utility.vector1_unsigned_long) -> NoneType  
- instantiated_some_phosphate(...) from builtins.PyCapsule
 - instantiated_some_phosphate(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> bool
  
- moving_partition_res(...) from builtins.PyCapsule
 - moving_partition_res(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.utility.vector1_unsigned_long
  
- phosphate_move_list(...) from builtins.PyCapsule
 - phosphate_move_list(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.utility.vector1_protocols_stepwise_modeler_rna_phosphate_PhosphateMove
  
- pose(...) from builtins.PyCapsule
 - pose(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> rosetta.core.pose.Pose
  
- reset(...) from builtins.PyCapsule
 - reset(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, pose : rosetta.core.pose.Pose) -> NoneType
  
- reset_to_original_pose(...) from builtins.PyCapsule
 - reset_to_original_pose(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> NoneType
  
- sample_phosphates(...) from builtins.PyCapsule
 - sample_phosphates(*args, **kwargs)
 
Overloaded function. 
  
1. sample_phosphates(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> NoneType 
  
2. sample_phosphates(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, viewer_pose_op : rosetta.core.pose.Pose) -> NoneType  
- screen_all(...) from builtins.PyCapsule
 - screen_all(rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler) -> bool
  
- set_five_prime_phosphate_res(...) from builtins.PyCapsule
 - set_five_prime_phosphate_res(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : rosetta.utility.vector1_unsigned_long) -> NoneType
  
- set_force_phosphate_instantiation(...) from builtins.PyCapsule
 - set_force_phosphate_instantiation(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : bool) -> NoneType
  
- set_moving_partition_res(...) from builtins.PyCapsule
 - set_moving_partition_res(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : rosetta.utility.vector1_unsigned_long) -> NoneType
  
- set_phosphate_move_list(...) from builtins.PyCapsule
 - set_phosphate_move_list(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : rosetta.utility.vector1_protocols_stepwise_modeler_rna_phosphate_PhosphateMove) -> NoneType
  
- set_scorefxn(...) from builtins.PyCapsule
 - set_scorefxn(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, scorefxn : rosetta.core.scoring.ScoreFunction) -> NoneType
  
- set_screen_all(...) from builtins.PyCapsule
 - set_screen_all(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : bool) -> NoneType
  
- set_three_prime_phosphate_res(...) from builtins.PyCapsule
 - set_three_prime_phosphate_res(self : rosetta.protocols.stepwise.modeler.rna.phosphate.MultiPhosphateSampler, setting : rosetta.utility.vector1_unsigned_long) -> NoneType
  
 
Methods inherited from rosetta.protocols.moves.Mover: 
- clear_info(...) from builtins.PyCapsule
 - clear_info(rosetta.protocols.moves.Mover) -> NoneType
 
  
Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file. 
  
  
 clear_info is called by jd2 before calling apply  
- create(...) from builtins.PyCapsule
 - create(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
  
- fresh_instance(...) from builtins.PyCapsule
 - fresh_instance(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
 
  
Generates a new Mover object freshly created with the default ctor.  
- get_additional_output(...) from builtins.PyCapsule
 - get_additional_output(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
 
  
fpd 
  
  
 Mechanism by which a mover may return multiple output poses from a single input pose.  
- get_current_job(...) from builtins.PyCapsule
 - get_current_job(rosetta.protocols.moves.Mover) -> protocols::jobdist::BasicJob
  
- get_current_tag(...) from builtins.PyCapsule
 - get_current_tag(rosetta.protocols.moves.Mover) -> str
 
  
A tag is a unique identifier used to identify structures produced 
 by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) 
 sets the tag.  This functionality is not intended for use with the 2008 job distributor.  
- get_input_pose(...) from builtins.PyCapsule
 - get_input_pose(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
  
- get_last_move_status(...) from builtins.PyCapsule
 - get_last_move_status(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.MoverStatus
 
  
returns status after an apply().  The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say "that run was no good, skip it" then use the protected last_move_status(MoverStatus) to change the value that this function will return.  
- get_native_pose(...) from builtins.PyCapsule
 - get_native_pose(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
  
- get_self_ptr(...) from builtins.PyCapsule
 - get_self_ptr(*args, **kwargs)
 
Overloaded function. 
  
1. get_self_ptr(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover 
  
2. get_self_ptr(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover  
- get_self_weak_ptr(...) from builtins.PyCapsule
 - get_self_weak_ptr(*args, **kwargs)
 
Overloaded function. 
  
1. get_self_weak_ptr(rosetta.protocols.moves.Mover) -> rosetta.std.weak_ptr_const_protocols_moves_Mover_t 
  
2. get_self_weak_ptr(rosetta.protocols.moves.Mover) -> rosetta.std.weak_ptr_protocols_moves_Mover_t  
- get_type(...) from builtins.PyCapsule
 - get_type(rosetta.protocols.moves.Mover) -> str
  
- info(...) from builtins.PyCapsule
 - info(*args, **kwargs)
 
Overloaded function. 
  
1. info(rosetta.protocols.moves.Mover) -> rosetta.std.list_std_string_std_allocator_std_string_t 
  
non-const accessor 
  
2. info(rosetta.protocols.moves.Mover) -> rosetta.std.list_std_string_std_allocator_std_string_t 
  
const accessor  
- last_proposal_density_ratio(...) from builtins.PyCapsule
 - last_proposal_density_ratio(rosetta.protocols.moves.Mover) -> float
  
- name(...) from builtins.PyCapsule
 - name() -> str
  
- register_options(...) from builtins.PyCapsule
 - register_options(*args, **kwargs)
 
Overloaded function. 
  
1. register_options() -> NoneType 
  
Overload this static method if you access options within the mover. 
  
  
 These options will end up in -help of your application if users of this mover call register_options. 
 Do this recursively! 
 If you use movers within your mover, call their register_options in your register_options() method. 
  
2. register_options() -> NoneType 
  
3. register_options() -> NoneType 
  
4. register_options() -> NoneType 
  
5. register_options() -> NoneType 
  
6. register_options() -> NoneType 
  
7. register_options() -> NoneType 
  
8. register_options() -> NoneType 
  
9. register_options() -> NoneType 
  
Associates relevant options with the AntibodyModeler class 
  
10. register_options() -> NoneType 
  
Associates relevant options with the AntibodyModeler class 
  
11. register_options() -> NoneType 
  
Associates relevant options with the SnugDock class 
  
12. register_options() -> NoneType 
  
Associates relevant options with the SnugDockProtocol class 
  
13. register_options() -> NoneType 
  
Register the options used by this mover with the global options 
 system. 
  
14. register_options() -> NoneType 
  
15. register_options() -> NoneType 
  
Associate relevant options with the TemperedDocking class. 
  
16. register_options() -> NoneType 
  
17. register_options() -> NoneType 
  
18. register_options() -> NoneType 
  
Associates relevant options with the TemperedDocking class. 
  
19. register_options() -> NoneType 
  
20. register_options() -> NoneType 
  
Associates relevant options with the ConstraintSetMover class 
  
21. register_options() -> NoneType 
  
22. register_options() -> NoneType 
  
Associates relevant options with the DockingInitialPerturbation class 
  
23. register_options() -> NoneType 
  
Associates relevant options with the DockingProtocol class 
  
24. register_options() -> NoneType 
  
Associates relevant options with the TemperedDocking class 
  
25. register_options() -> NoneType 
  
26. register_options() -> NoneType 
  
27. register_options() -> NoneType 
  
28. register_options() -> NoneType 
  
register options 
  
29. register_options() -> NoneType 
  
30. register_options() -> NoneType 
  
Registers applicable options 
  
31. register_options() -> NoneType 
  
Register options with the option system. 
  
32. register_options() -> NoneType 
  
33. register_options() -> NoneType 
  
34. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
35. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycleContainer class 
  
36. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
37. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
38. register_options() -> NoneType 
  
39. register_options() -> NoneType 
  
Register options with the option system. 
  
40. register_options() -> NoneType  
- reinitialize_for_each_job(...) from builtins.PyCapsule
 - reinitialize_for_each_job(rosetta.protocols.moves.Mover) -> bool
 
  
Inform the Job Distributor (August '08 vintage) whether this object needs to be freshly regenerated on 
 each use.  
- reinitialize_for_new_input(...) from builtins.PyCapsule
 - reinitialize_for_new_input(rosetta.protocols.moves.Mover) -> bool
 
  
Inform the Job Distributor (August '08 vintage) whether this object needs to be regenerated when the input 
 pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for 
 that one input pose).  
- reset_status(...) from builtins.PyCapsule
 - reset_status(rosetta.protocols.moves.Mover) -> NoneType
 
  
resets status to SUCCESS, meant to be used before an apply().  The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.  
- set_current_job(...) from builtins.PyCapsule
 - set_current_job(self : rosetta.protocols.moves.Mover, job : protocols::jobdist::BasicJob) -> NoneType
 
  
////////////////////////////end Job Distributor interface////////////////////////////////////////  
- set_current_tag(...) from builtins.PyCapsule
 - set_current_tag(self : rosetta.protocols.moves.Mover, new_tag : str) -> NoneType
  
- set_input_pose(...) from builtins.PyCapsule
 - set_input_pose(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
setter for poses contained for rms  
- set_native_pose(...) from builtins.PyCapsule
 - set_native_pose(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
setter for native poses contained for rms ---- we should get rid of this method? it is widely used, but a bit unsafe  
- set_type(...) from builtins.PyCapsule
 - set_type(self : rosetta.protocols.moves.Mover, setting : str) -> NoneType
  
- test_move(...) from builtins.PyCapsule
 - test_move(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
: Unit test support function.  Apply one move to a given pose. 
      Allows extra test specific functions to be called before applying  
- type(...) from builtins.PyCapsule
 - type(*args, **kwargs)
 
Overloaded function. 
  
1. type(rosetta.protocols.moves.Mover) -> str 
  
2. type(self : rosetta.protocols.moves.Mover, type_in : str) -> NoneType  
 |    
  
 
  
class PhosphateMover(rosetta.protocols.moves.Mover) |  
    
|     | 
////////////////////////////////////////////////////////////   |  
|   | 
- Method resolution order:
 
- PhosphateMover
 
- rosetta.protocols.moves.Mover
 
- builtins.object
 
 
 
Methods defined here: 
- __init__(...) from builtins.PyCapsule
 - __init__(*args, **kwargs)
 
Overloaded function. 
  
1. __init__(self : handle, sample_res : int, which_terminus_ : rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateTerminus, scorefxn : rosetta.core.scoring.ScoreFunction) -> NoneType 
  
2. __init__(self : handle, phosphate_move : rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMove, scorefxn : rosetta.core.scoring.ScoreFunction) -> NoneType 
  
3. __init__(handle, rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover) -> NoneType  
- __new__(*args, **kwargs) from builtins.type
 - Create and return a new object.  See help(type) for accurate signature.
  
- apply(...) from builtins.PyCapsule
 - apply(self : rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover, pose_to_visualize : rosetta.core.pose.Pose) -> NoneType
  
- force_phosphate_instantiation(...) from builtins.PyCapsule
 - force_phosphate_instantiation(rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover) -> bool
  
- get_name(...) from builtins.PyCapsule
 - get_name(rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover) -> str
  
- instantiated_phosphate(...) from builtins.PyCapsule
 - instantiated_phosphate(rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover) -> bool
  
- screen_phosphate(...) from builtins.PyCapsule
 - screen_phosphate(self : rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover, pose : rosetta.core.pose.Pose) -> NoneType
  
- set_force_phosphate_instantiation(...) from builtins.PyCapsule
 - set_force_phosphate_instantiation(self : rosetta.protocols.stepwise.modeler.rna.phosphate.PhosphateMover, setting : bool) -> NoneType
  
 
Methods inherited from rosetta.protocols.moves.Mover: 
- assign(...) from builtins.PyCapsule
 - assign(self : rosetta.protocols.moves.Mover, other : rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
  
- clear_info(...) from builtins.PyCapsule
 - clear_info(rosetta.protocols.moves.Mover) -> NoneType
 
  
Strings container can be used to return miscellaneous info (as std::string) from a mover, such as notes about the results of apply(). The job distributor (Apr 09 vintage) will check this function to see if your protocol wants to add string info to the Job that ran this mover. One way this can be useful is that later, a JobOutputter may include/append this info to an output file. 
  
  
 clear_info is called by jd2 before calling apply  
- clone(...) from builtins.PyCapsule
 - clone(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
 
  
Return a clone of the Mover object.  
- create(...) from builtins.PyCapsule
 - create(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
  
- fresh_instance(...) from builtins.PyCapsule
 - fresh_instance(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover
 
  
Generates a new Mover object freshly created with the default ctor.  
- get_additional_output(...) from builtins.PyCapsule
 - get_additional_output(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
 
  
fpd 
  
  
 Mechanism by which a mover may return multiple output poses from a single input pose.  
- get_current_job(...) from builtins.PyCapsule
 - get_current_job(rosetta.protocols.moves.Mover) -> protocols::jobdist::BasicJob
  
- get_current_tag(...) from builtins.PyCapsule
 - get_current_tag(rosetta.protocols.moves.Mover) -> str
 
  
A tag is a unique identifier used to identify structures produced 
 by this Mover. get_current_tag() returns the tag, and set_current_tag( std::string tag ) 
 sets the tag.  This functionality is not intended for use with the 2008 job distributor.  
- get_input_pose(...) from builtins.PyCapsule
 - get_input_pose(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
  
- get_last_move_status(...) from builtins.PyCapsule
 - get_last_move_status(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.MoverStatus
 
  
returns status after an apply().  The job distributor (august 08 vintage) will check this function to see if your protocol wants to filter its results - if your protocol wants to say "that run was no good, skip it" then use the protected last_move_status(MoverStatus) to change the value that this function will return.  
- get_native_pose(...) from builtins.PyCapsule
 - get_native_pose(rosetta.protocols.moves.Mover) -> rosetta.core.pose.Pose
  
- get_self_ptr(...) from builtins.PyCapsule
 - get_self_ptr(*args, **kwargs)
 
Overloaded function. 
  
1. get_self_ptr(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover 
  
2. get_self_ptr(rosetta.protocols.moves.Mover) -> rosetta.protocols.moves.Mover  
- get_self_weak_ptr(...) from builtins.PyCapsule
 - get_self_weak_ptr(*args, **kwargs)
 
Overloaded function. 
  
1. get_self_weak_ptr(rosetta.protocols.moves.Mover) -> rosetta.std.weak_ptr_const_protocols_moves_Mover_t 
  
2. get_self_weak_ptr(rosetta.protocols.moves.Mover) -> rosetta.std.weak_ptr_protocols_moves_Mover_t  
- get_type(...) from builtins.PyCapsule
 - get_type(rosetta.protocols.moves.Mover) -> str
  
- info(...) from builtins.PyCapsule
 - info(*args, **kwargs)
 
Overloaded function. 
  
1. info(rosetta.protocols.moves.Mover) -> rosetta.std.list_std_string_std_allocator_std_string_t 
  
non-const accessor 
  
2. info(rosetta.protocols.moves.Mover) -> rosetta.std.list_std_string_std_allocator_std_string_t 
  
const accessor  
- last_proposal_density_ratio(...) from builtins.PyCapsule
 - last_proposal_density_ratio(rosetta.protocols.moves.Mover) -> float
  
- name(...) from builtins.PyCapsule
 - name() -> str
  
- register_options(...) from builtins.PyCapsule
 - register_options(*args, **kwargs)
 
Overloaded function. 
  
1. register_options() -> NoneType 
  
Overload this static method if you access options within the mover. 
  
  
 These options will end up in -help of your application if users of this mover call register_options. 
 Do this recursively! 
 If you use movers within your mover, call their register_options in your register_options() method. 
  
2. register_options() -> NoneType 
  
3. register_options() -> NoneType 
  
4. register_options() -> NoneType 
  
5. register_options() -> NoneType 
  
6. register_options() -> NoneType 
  
7. register_options() -> NoneType 
  
8. register_options() -> NoneType 
  
9. register_options() -> NoneType 
  
Associates relevant options with the AntibodyModeler class 
  
10. register_options() -> NoneType 
  
Associates relevant options with the AntibodyModeler class 
  
11. register_options() -> NoneType 
  
Associates relevant options with the SnugDock class 
  
12. register_options() -> NoneType 
  
Associates relevant options with the SnugDockProtocol class 
  
13. register_options() -> NoneType 
  
Register the options used by this mover with the global options 
 system. 
  
14. register_options() -> NoneType 
  
15. register_options() -> NoneType 
  
Associate relevant options with the TemperedDocking class. 
  
16. register_options() -> NoneType 
  
17. register_options() -> NoneType 
  
18. register_options() -> NoneType 
  
Associates relevant options with the TemperedDocking class. 
  
19. register_options() -> NoneType 
  
20. register_options() -> NoneType 
  
Associates relevant options with the ConstraintSetMover class 
  
21. register_options() -> NoneType 
  
22. register_options() -> NoneType 
  
Associates relevant options with the DockingInitialPerturbation class 
  
23. register_options() -> NoneType 
  
Associates relevant options with the DockingProtocol class 
  
24. register_options() -> NoneType 
  
Associates relevant options with the TemperedDocking class 
  
25. register_options() -> NoneType 
  
26. register_options() -> NoneType 
  
27. register_options() -> NoneType 
  
28. register_options() -> NoneType 
  
register options 
  
29. register_options() -> NoneType 
  
30. register_options() -> NoneType 
  
Registers applicable options 
  
31. register_options() -> NoneType 
  
Register options with the option system. 
  
32. register_options() -> NoneType 
  
33. register_options() -> NoneType 
  
34. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
35. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycleContainer class 
  
36. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
37. register_options() -> NoneType 
  
Associates relevant options with the LoopRefineInnerCycle class 
  
38. register_options() -> NoneType 
  
39. register_options() -> NoneType 
  
Register options with the option system. 
  
40. register_options() -> NoneType  
- reinitialize_for_each_job(...) from builtins.PyCapsule
 - reinitialize_for_each_job(rosetta.protocols.moves.Mover) -> bool
 
  
Inform the Job Distributor (August '08 vintage) whether this object needs to be freshly regenerated on 
 each use.  
- reinitialize_for_new_input(...) from builtins.PyCapsule
 - reinitialize_for_new_input(rosetta.protocols.moves.Mover) -> bool
 
  
Inform the Job Distributor (August '08 vintage) whether this object needs to be regenerated when the input 
 pose is about to change, (for example, if the Mover has special code on the first apply() that is only valid for 
 that one input pose).  
- reset_status(...) from builtins.PyCapsule
 - reset_status(rosetta.protocols.moves.Mover) -> NoneType
 
  
resets status to SUCCESS, meant to be used before an apply().  The job distributor (august 08 vintage) uses this to ensure non-accumulation of status across apply()s.  
- set_current_job(...) from builtins.PyCapsule
 - set_current_job(self : rosetta.protocols.moves.Mover, job : protocols::jobdist::BasicJob) -> NoneType
 
  
////////////////////////////end Job Distributor interface////////////////////////////////////////  
- set_current_tag(...) from builtins.PyCapsule
 - set_current_tag(self : rosetta.protocols.moves.Mover, new_tag : str) -> NoneType
  
- set_input_pose(...) from builtins.PyCapsule
 - set_input_pose(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
setter for poses contained for rms  
- set_native_pose(...) from builtins.PyCapsule
 - set_native_pose(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
setter for native poses contained for rms ---- we should get rid of this method? it is widely used, but a bit unsafe  
- set_type(...) from builtins.PyCapsule
 - set_type(self : rosetta.protocols.moves.Mover, setting : str) -> NoneType
  
- test_move(...) from builtins.PyCapsule
 - test_move(self : rosetta.protocols.moves.Mover, pose : rosetta.core.pose.Pose) -> NoneType
 
  
: Unit test support function.  Apply one move to a given pose. 
      Allows extra test specific functions to be called before applying  
- type(...) from builtins.PyCapsule
 - type(*args, **kwargs)
 
Overloaded function. 
  
1. type(rosetta.protocols.moves.Mover) -> str 
  
2. type(self : rosetta.protocols.moves.Mover, type_in : str) -> NoneType  
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