Bindings for protocols::farna::secstruct namespace

Classes
		builtins.object RNA_SecStruct rosetta.basic.datacache.CacheableData(builtins.object) RNA_SecStructLegacyInfo   class RNA_SecStruct(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.protocols.farna.secstruct.RNA_SecStruct, str) -> NoneType   doc   2. __init__(rosetta.protocols.farna.secstruct.RNA_SecStruct, str, str) -> NoneType   doc   3. __init__(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, secstruct : str, secstruct_file : str, sequence : str) -> NoneType   4. __init__(self : rosetta.protocols.farna.secstruct.RNA_SecStruct,  : rosetta.protocols.farna.secstruct.RNA_SecStruct) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.protocols.farna.secstruct.RNA_SecStruct,  : rosetta.protocols.farna.secstruct.RNA_SecStruct) -> rosetta.protocols.farna.secstruct.RNA_SecStruct blank(...) from builtins.PyCapsule blank(rosetta.protocols.farna.secstruct.RNA_SecStruct) -> bool check_compatible_with_sequence(...) from builtins.PyCapsule check_compatible_with_sequence(*args, **kwargs) Overloaded function.   1. check_compatible_with_sequence(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, sequence_in : str) -> NoneType   2. check_compatible_with_sequence(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, sequence_in : str, check_complementarity : bool) -> NoneType get_all_stems(...) from builtins.PyCapsule get_all_stems(*args, **kwargs) Overloaded function.   1. get_all_stems(rosetta.protocols.farna.secstruct.RNA_SecStruct) -> rosetta.utility.vector1_utility_vector1_std_pair_unsigned_long_unsigned_long_std_allocator_std_pair_unsigned_long_unsigned_long_t   2. get_all_stems(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, sequence : str) -> rosetta.utility.vector1_utility_vector1_std_pair_unsigned_long_unsigned_long_std_allocator_std_pair_unsigned_long_unsigned_long_t   3. get_all_stems(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, sequence : str, cutpoint_open : rosetta.utility.vector1_unsigned_long) -> rosetta.utility.vector1_utility_vector1_std_pair_unsigned_long_unsigned_long_std_allocator_std_pair_unsigned_long_unsigned_long_t remove_pair(...) from builtins.PyCapsule remove_pair(self : rosetta.protocols.farna.secstruct.RNA_SecStruct, pair : (int, int)) -> NoneType secstruct(...) from builtins.PyCapsule secstruct(rosetta.protocols.farna.secstruct.RNA_SecStruct) -> str size(...) from builtins.PyCapsule size(rosetta.protocols.farna.secstruct.RNA_SecStruct) -> int   class RNA_SecStructLegacyInfo(rosetta.basic.datacache.CacheableData)     /////////////////////////////////////////////////////////////////////////////////////////////////      Keep track of RNA centroid information inside the pose. / Rhiju move this to its own namespace!     Method resolution order: RNA_SecStructLegacyInfo rosetta.basic.datacache.CacheableData builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, rna_secstruct_legacy_string : str) -> NoneType   3. __init__(handle, rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo,  : rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo) -> rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo clone(...) from builtins.PyCapsule clone(rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo) -> rosetta.basic.datacache.CacheableData get_secstruct(...) from builtins.PyCapsule get_secstruct(rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo) -> str set_secstruct(...) from builtins.PyCapsule set_secstruct(self : rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo, secstruct : str) -> NoneType size(...) from builtins.PyCapsule size(rosetta.protocols.farna.secstruct.RNA_SecStructLegacyInfo) -> int Methods inherited from rosetta.basic.datacache.CacheableData: get_self_ptr(...) from builtins.PyCapsule get_self_ptr(*args, **kwargs) Overloaded function.   1. get_self_ptr(rosetta.basic.datacache.CacheableData) -> rosetta.basic.datacache.CacheableData   self pointers   2. get_self_ptr(rosetta.basic.datacache.CacheableData) -> rosetta.basic.datacache.CacheableData get_self_weak_ptr(...) from builtins.PyCapsule get_self_weak_ptr(*args, **kwargs) Overloaded function.   1. get_self_weak_ptr(rosetta.basic.datacache.CacheableData) -> rosetta.std.weak_ptr_const_basic_datacache_CacheableData_t   2. get_self_weak_ptr(rosetta.basic.datacache.CacheableData) -> rosetta.std.weak_ptr_basic_datacache_CacheableData_t

Functions
		clear_rna_secstruct_legacy_info(...) method of builtins.PyCapsule instance clear_rna_secstruct_legacy_info(pose : rosetta.core.pose.Pose) -> NoneType get_rna_secstruct_legacy(...) method of builtins.PyCapsule instance get_rna_secstruct_legacy(pose : rosetta.core.pose.Pose) -> str set_rna_secstruct_legacy(...) method of builtins.PyCapsule instance set_rna_secstruct_legacy(pose : rosetta.core.pose.Pose, rna_secstruct_legacy_string : str) -> NoneType