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- builtins.object
-
- FragmentLibrary
- RNA_Fragments
-
- FullAtomRNA_Fragments
- TorsionSet
class FragmentLibrary(builtins.object) |
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//////////////////////////////////////////////////////////////////////////////////////////////
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Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(rosetta.protocols.farna.fragments.FragmentLibrary) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- add_torsion(...) from builtins.PyCapsule
- add_torsion(*args, **kwargs)
Overloaded function.
1. add_torsion(self : rosetta.protocols.farna.fragments.FragmentLibrary, torsion_set : rosetta.protocols.farna.fragments.TorsionSet) -> NoneType
2. add_torsion(self : rosetta.protocols.farna.fragments.FragmentLibrary, vall : protocols::farna::fragments::FullAtomRNA_Fragments, position : int, size : int) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.farna.fragments.FragmentLibrary, : rosetta.protocols.farna.fragments.FragmentLibrary) -> rosetta.protocols.farna.fragments.FragmentLibrary
- get_align_depth(...) from builtins.PyCapsule
- get_align_depth(rosetta.protocols.farna.fragments.FragmentLibrary) -> int
- get_fragment_torsion(...) from builtins.PyCapsule
- get_fragment_torsion(self : rosetta.protocols.farna.fragments.FragmentLibrary, num_torsion : int, which_frag : int, offset : int) -> float
- get_fragment_torsion_set(...) from builtins.PyCapsule
- get_fragment_torsion_set(self : rosetta.protocols.farna.fragments.FragmentLibrary, which_frag : int) -> rosetta.protocols.farna.fragments.TorsionSet
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class FullAtomRNA_Fragments(RNA_Fragments) |
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//////////////////////////////////////////////////////////////////////////////////////////////
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- Method resolution order:
- FullAtomRNA_Fragments
- RNA_Fragments
- builtins.object
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(self : handle, filename : str) -> NoneType
2. __init__(handle, rosetta.protocols.farna.fragments.FullAtomRNA_Fragments) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- apply_random_fragment(...) from builtins.PyCapsule
- apply_random_fragment(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, pose : rosetta.core.pose.Pose, position : int, size : int, type : int, atom_level_domain_map : rosetta.protocols.toolbox.AtomLevelDomainMap) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments) -> rosetta.protocols.farna.fragments.FullAtomRNA_Fragments
- is_fullatom(...) from builtins.PyCapsule
- is_fullatom(rosetta.protocols.farna.fragments.FullAtomRNA_Fragments) -> bool
- name(...) from builtins.PyCapsule
- name(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, i : int) -> str
- non_main_chain_sugar_coords(...) from builtins.PyCapsule
- non_main_chain_sugar_coords(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, i : int, j : int, k : int) -> float
- non_main_chain_sugar_coords_defined(...) from builtins.PyCapsule
- non_main_chain_sugar_coords_defined(rosetta.protocols.farna.fragments.FullAtomRNA_Fragments) -> bool
- secstruct(...) from builtins.PyCapsule
- secstruct(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, i : int) -> str
- torsions(...) from builtins.PyCapsule
- torsions(self : rosetta.protocols.farna.fragments.FullAtomRNA_Fragments, i : int, j : int) -> float
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class TorsionSet(builtins.object) |
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//////////////////////////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////////////////////////
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Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(self : rosetta.protocols.farna.fragments.TorsionSet, size : int) -> NoneType
2. __init__(self : rosetta.protocols.farna.fragments.TorsionSet, : rosetta.protocols.farna.fragments.TorsionSet) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.farna.fragments.TorsionSet, src : rosetta.protocols.farna.fragments.TorsionSet) -> rosetta.protocols.farna.fragments.TorsionSet
- get_size(...) from builtins.PyCapsule
- get_size(rosetta.protocols.farna.fragments.TorsionSet) -> int
Data descriptors defined here:
- non_main_chain_sugar_coords
- non_main_chain_sugar_coords_defined
- secstruct
- torsion_source_name
- torsions
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