| | |
- builtins.object
-
- DataBuffer
- PoolData
- Pool_RMSD
-
- HPool_RMSD
- HierarchicalLevel
- rosetta.protocols.evaluation.PoseEvaluator(builtins.object)
-
- Pool_Evaluator
- rosetta.protocols.moves.EXCN_Converged(rosetta.utility.excn.EXCN_Msg_Exception)
-
- EXCN_Heat_Converged
- EXCN_Pool_Converged
- rosetta.protocols.moves.MonteCarloExceptionConverge(builtins.object)
-
- Heat_ConvergenceCheck
- Pool_ConvergenceCheck
class DataBuffer(builtins.object) |
| | |
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer) -> NoneType
2. __init__(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- address_to_buf(...) from builtins.PyCapsule
- address_to_buf(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, address : rosetta.utility.vector1_unsigned_long, buf : int, start_index : int) -> NoneType
- array_to_farray(...) from builtins.PyCapsule
- array_to_farray(*args, **kwargs)
Overloaded function.
1. array_to_farray(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, index : int, coords : ObjexxFCL::FArray2D<double>, coord_buf : float) -> NoneType
2. array_to_farray(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, index : int, num_to_add : int, coords : ObjexxFCL::FArray2D<double>, coord_buf : float) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer
- buf_to_address(...) from builtins.PyCapsule
- buf_to_address(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, address : rosetta.utility.vector1_unsigned_long, buf : int, start_index : int) -> NoneType
- farray_to_array(...) from builtins.PyCapsule
- farray_to_array(*args, **kwargs)
Overloaded function.
1. farray_to_array(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, index : int, coords : ObjexxFCL::FArray2D<double>, coord_buf : float) -> NoneType
2. farray_to_array(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, index : int, num_to_add : int, coords : ObjexxFCL::FArray2D<double>, coord_buf : float) -> NoneType
- setup(...) from builtins.PyCapsule
- setup(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.DataBuffer, num_slave_nodes : int, nresidues : int, nlevels : int) -> NoneType
Data descriptors defined here:
- best_candidate_rmsds_
- candidate_address_
- candidate_best_rmsd_
- candidate_coords_
- candidate_nbr_index_
- coords_
- is_a_neighbor_
- new_level_begins_
- num_new_neighbors_
- temp_coords_
- winning_address_
- winning_tag_
|
class HPool_RMSD(Pool_RMSD) |
| | |
- Method resolution order:
- HPool_RMSD
- Pool_RMSD
- builtins.object
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(handle, str) -> NoneType
doc
2. __init__(self : handle, silent_file : str, lv : int) -> NoneType
3. __init__(handle, rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD
- clear_lib(...) from builtins.PyCapsule
- clear_lib(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, : int) -> NoneType
- debug(...) from builtins.PyCapsule
- debug(rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD) -> NoneType
- evaluate(...) from builtins.PyCapsule
- evaluate(*args, **kwargs)
Overloaded function.
1. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, pose : rosetta.core.pose.Pose, resolution : float, best_decoy : str, best_rmsd : float) -> int
2. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, pss : rosetta.core.io.silent.SilentStruct, resolution : float, best_decoy : str, best_rmsd : float) -> int
- get_size(...) from builtins.PyCapsule
- get_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, nsubc : int) -> int
- load_lib(...) from builtins.PyCapsule
- load_lib(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HPool_RMSD, : int) -> bool
Methods inherited from Pool_RMSD:
- add(...) from builtins.PyCapsule
- add(*args, **kwargs)
Overloaded function.
1. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct) -> NoneType
2. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct, new_tag : str) -> NoneType
3. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.pose.Pose, new_tag : str) -> NoneType
4. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : ObjexxFCL::FArray2D<double>, nres : int, new_tag : str) -> NoneType
- clear(...) from builtins.PyCapsule
- clear(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- evaluate_and_add(...) from builtins.PyCapsule
- evaluate_and_add(*args, **kwargs)
Overloaded function.
1. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, pose : rosetta.core.pose.Pose, cluster_center : str, best_rmsd : float, transition_threshold : float) -> int
2. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, coords : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : float, transition_threshold : float) -> int
- finalize(...) from builtins.PyCapsule
- finalize(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- get(...) from builtins.PyCapsule
- get(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int, result : ObjexxFCL::FArray2D<double>) -> NoneType
- get_tag(...) from builtins.PyCapsule
- get_tag(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int) -> str
- pop_back(...) from builtins.PyCapsule
- pop_back(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- set_excluded_residues(...) from builtins.PyCapsule
- set_excluded_residues(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, excluded_residues : rosetta.utility.vector1_unsigned_long) -> NoneType
- set_reserve_size(...) from builtins.PyCapsule
- set_reserve_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, max_size : int) -> NoneType
- size(...) from builtins.PyCapsule
- size(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> int
|
class HierarchicalLevel(Pool_RMSD) |
| | |
- Method resolution order:
- HierarchicalLevel
- Pool_RMSD
- builtins.object
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(self : handle, nlevels : int, filename : str) -> NoneType
2. __init__(self : handle, nlevels : int) -> NoneType
3. __init__(self : handle, level : int, max_levels : int) -> NoneType
4. __init__(handle, rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- add_new(...) from builtins.PyCapsule
- add_new(*args, **kwargs)
Overloaded function.
1. add_new(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, pose : rosetta.core.pose.Pose, tag : str, address : rosetta.utility.vector1_unsigned_long, write_to_file : bool, new_level : int) -> NoneType
2. add_new(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : rosetta.core.io.silent.SilentStruct, tag : str, address : rosetta.utility.vector1_unsigned_long, write_to_file : bool, new_level : int) -> NoneType
3. add_new(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : ObjexxFCL::FArray2D<double>, tag : str, address : rosetta.utility.vector1_unsigned_long) -> bool
4. add_new(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : ObjexxFCL::FArray2D<double>, tag : str, address : rosetta.utility.vector1_unsigned_long, resolve_remaining_levels : bool) -> bool
- add_to_top_level(...) from builtins.PyCapsule
- add_to_top_level(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : ObjexxFCL::FArray2D<double>, tag : str) -> NoneType
- address(...) from builtins.PyCapsule
- address(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, index : int) -> rosetta.utility.vector1_unsigned_long
- address_exists_in_cache(...) from builtins.PyCapsule
- address_exists_in_cache(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, addr : rosetta.utility.vector1_unsigned_long) -> bool
- clear(...) from builtins.PyCapsule
- clear(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- debug_print_addresses(...) from builtins.PyCapsule
- debug_print_addresses(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- debug_print_hierarchy(...) from builtins.PyCapsule
- debug_print_hierarchy(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- debug_print_size_per_level(...) from builtins.PyCapsule
- debug_print_size_per_level(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- equal_addresses(...) from builtins.PyCapsule
- equal_addresses(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address1 : rosetta.utility.vector1_unsigned_long, address2 : rosetta.utility.vector1_unsigned_long) -> bool
- evaluate(...) from builtins.PyCapsule
- evaluate(*args, **kwargs)
Overloaded function.
1. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, pose : rosetta.core.pose.Pose, best_decoy : str, best_rmsd : rosetta.utility.vector1_double, address : rosetta.utility.vector1_unsigned_long) -> int
2. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : rosetta.core.io.silent.SilentStruct, best_decoy : str, best_rmsd : rosetta.utility.vector1_double, address : rosetta.utility.vector1_unsigned_long) -> int
3. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : rosetta.utility.vector1_double, address : rosetta.utility.vector1_unsigned_long) -> int
4. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : rosetta.utility.vector1_double, address : rosetta.utility.vector1_unsigned_long, reset_all_levels : bool, load_if_missing : bool) -> int
- filename(...) from builtins.PyCapsule
- filename(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> str
- fill_top_level(...) from builtins.PyCapsule
- fill_top_level(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, top_level_pool : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- first_zero_pos(...) from builtins.PyCapsule
- first_zero_pos(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address : rosetta.utility.vector1_unsigned_long) -> int
- get_addresses_at_level(...) from builtins.PyCapsule
- get_addresses_at_level(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, : rosetta.utility.vector1_utility_vector1_unsigned_long_std_allocator_unsigned_long_t) -> NoneType
- has_next_level(...) from builtins.PyCapsule
- has_next_level(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> bool
- level(...) from builtins.PyCapsule
- level(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> int
- level_find(...) from builtins.PyCapsule
- level_find(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address : rosetta.utility.vector1_unsigned_long, level : int, : std::_List_iterator<protocols::canonical_sampling::mc_convergence_checks::PoolData>) -> bool
- level_radius(...) from builtins.PyCapsule
- level_radius(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, level : int) -> float
- level_size(...) from builtins.PyCapsule
- level_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, level : int) -> int
- lib_full_path(...) from builtins.PyCapsule
- lib_full_path(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address : rosetta.utility.vector1_unsigned_long) -> str
- max_cache_size(...) from builtins.PyCapsule
- max_cache_size(*args, **kwargs)
Overloaded function.
1. max_cache_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, max_size : int) -> NoneType
2. max_cache_size(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> int
- next_level(...) from builtins.PyCapsule
- next_level(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel
- nlevels(...) from builtins.PyCapsule
- nlevels(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> int
- pool_exists(...) from builtins.PyCapsule
- pool_exists(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address : rosetta.utility.vector1_unsigned_long) -> bool
- pool_size(...) from builtins.PyCapsule
- pool_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, address : rosetta.utility.vector1_unsigned_long, level : int) -> int
- print_addresses_at_level(...) from builtins.PyCapsule
- print_addresses_at_level(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- radius(...) from builtins.PyCapsule
- radius(*args, **kwargs)
Overloaded function.
1. radius(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, radius : float) -> NoneType
2. radius(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> float
- round(...) from builtins.PyCapsule
- round(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, rmsd : float) -> NoneType
- size(...) from builtins.PyCapsule
- size(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> int
- test_round(...) from builtins.PyCapsule
- test_round(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> NoneType
- top_level_pool_size(...) from builtins.PyCapsule
- top_level_pool_size(rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel) -> int
- write_headers_to_hierarchy(...) from builtins.PyCapsule
- write_headers_to_hierarchy(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.HierarchicalLevel, ss : rosetta.core.io.silent.SilentStruct) -> NoneType
Methods inherited from Pool_RMSD:
- add(...) from builtins.PyCapsule
- add(*args, **kwargs)
Overloaded function.
1. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct) -> NoneType
2. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct, new_tag : str) -> NoneType
3. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.pose.Pose, new_tag : str) -> NoneType
4. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : ObjexxFCL::FArray2D<double>, nres : int, new_tag : str) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD
- evaluate_and_add(...) from builtins.PyCapsule
- evaluate_and_add(*args, **kwargs)
Overloaded function.
1. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, pose : rosetta.core.pose.Pose, cluster_center : str, best_rmsd : float, transition_threshold : float) -> int
2. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, coords : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : float, transition_threshold : float) -> int
- finalize(...) from builtins.PyCapsule
- finalize(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- get(...) from builtins.PyCapsule
- get(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int, result : ObjexxFCL::FArray2D<double>) -> NoneType
- get_tag(...) from builtins.PyCapsule
- get_tag(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int) -> str
- pop_back(...) from builtins.PyCapsule
- pop_back(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- set_excluded_residues(...) from builtins.PyCapsule
- set_excluded_residues(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, excluded_residues : rosetta.utility.vector1_unsigned_long) -> NoneType
- set_reserve_size(...) from builtins.PyCapsule
- set_reserve_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, max_size : int) -> NoneType
|
class PoolData(builtins.object) |
| | |
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(rosetta.protocols.canonical_sampling.mc_convergence_checks.PoolData) -> NoneType
2. __init__(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.PoolData, pool : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, address : rosetta.utility.vector1_unsigned_long, nlevels : int) -> NoneType
3. __init__(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.PoolData, pool : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, address : rosetta.utility.vector1_unsigned_long) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- setup(...) from builtins.PyCapsule
- setup(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.PoolData, nlevels : int) -> NoneType
Data descriptors defined here:
- address_
- nlevels_
- pool_
|
class Pool_Evaluator(rosetta.protocols.evaluation.PoseEvaluator) |
| | |
- Method resolution order:
- Pool_Evaluator
- rosetta.protocols.evaluation.PoseEvaluator
- builtins.object
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(self : handle, rmsd_pool_in : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- apply(...) from builtins.PyCapsule
- apply(*args, **kwargs)
Overloaded function.
1. apply(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator, : rosetta.core.pose.Pose, tag : str, pss : rosetta.core.io.silent.SilentStruct) -> NoneType
evaluate pose and store values in Silent_Struct
2. apply(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator, pss : rosetta.core.io.silent.SilentStruct) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator, : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator
- name(...) from builtins.PyCapsule
- name(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator, i : int) -> str
- size(...) from builtins.PyCapsule
- size(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_Evaluator) -> int
Methods inherited from rosetta.protocols.evaluation.PoseEvaluator:
- applicable(...) from builtins.PyCapsule
- applicable(self : rosetta.protocols.evaluation.PoseEvaluator, : rosetta.core.pose.Pose) -> bool
|
class Pool_RMSD(builtins.object) |
| | |
Methods defined here:
- __init__(...) from builtins.PyCapsule
- __init__(*args, **kwargs)
Overloaded function.
1. __init__(self : handle, silent_file : str) -> NoneType
2. __init__(handle) -> NoneType
3. __init__(handle, rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- __new__(*args, **kwargs) from builtins.type
- Create and return a new object. See help(type) for accurate signature.
- add(...) from builtins.PyCapsule
- add(*args, **kwargs)
Overloaded function.
1. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct) -> NoneType
2. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct, new_tag : str) -> NoneType
3. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.pose.Pose, new_tag : str) -> NoneType
4. add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : ObjexxFCL::FArray2D<double>, nres : int, new_tag : str) -> NoneType
- assign(...) from builtins.PyCapsule
- assign(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD
- clear(...) from builtins.PyCapsule
- clear(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- evaluate(...) from builtins.PyCapsule
- evaluate(*args, **kwargs)
Overloaded function.
1. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.pose.Pose, best_decoy : str, best_rmsd : float) -> int
return position in pool for the best_decoy
2. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : rosetta.core.io.silent.SilentStruct, best_decoy : str, best_rmsd : float) -> int
3. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : float) -> int
4. evaluate(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : float, index : int) -> int
- evaluate_and_add(...) from builtins.PyCapsule
- evaluate_and_add(*args, **kwargs)
Overloaded function.
1. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, pose : rosetta.core.pose.Pose, cluster_center : str, best_rmsd : float, transition_threshold : float) -> int
2. evaluate_and_add(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, coords : ObjexxFCL::FArray2D<double>, best_decoy : str, best_rmsd : float, transition_threshold : float) -> int
- finalize(...) from builtins.PyCapsule
- finalize(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- get(...) from builtins.PyCapsule
- get(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int, result : ObjexxFCL::FArray2D<double>) -> NoneType
- get_tag(...) from builtins.PyCapsule
- get_tag(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, index : int) -> str
- pop_back(...) from builtins.PyCapsule
- pop_back(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> NoneType
- set_excluded_residues(...) from builtins.PyCapsule
- set_excluded_residues(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, excluded_residues : rosetta.utility.vector1_unsigned_long) -> NoneType
- set_reserve_size(...) from builtins.PyCapsule
- set_reserve_size(self : rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD, max_size : int) -> NoneType
- size(...) from builtins.PyCapsule
- size(rosetta.protocols.canonical_sampling.mc_convergence_checks.Pool_RMSD) -> int
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