rosetta.protocols.antibody.residue_selector
index
(built-in)

Bindings for protocols::antibody::residue_selector namespace

 
Classes
       
rosetta.core.select.residue_selector.ResidueSelector(builtins.object)
AntibodyRegionSelector
CDRResidueSelector
rosetta.core.select.residue_selector.ResidueSelectorCreator(builtins.object)
AntibodyRegionSelectorCreator
CDRResidueSelectorCreator

 
class AntibodyRegionSelector(rosetta.core.select.residue_selector.ResidueSelector)
    A simple selector to select residues of particular antibody regions.
 
 
Method resolution order:
AntibodyRegionSelector
rosetta.core.select.residue_selector.ResidueSelector
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(handle) -> NoneType
 
2. __init__(self : handle, ab_info : rosetta.protocols.antibody.AntibodyInfo) -> NoneType
 
3. __init__(self : handle, ab_info : rosetta.protocols.antibody.AntibodyInfo, region : rosetta.protocols.antibody.AntibodyRegionEnum) -> NoneType
 
4. __init__(handle, rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
apply(...) from builtins.PyCapsule
apply(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector, pose : rosetta.core.pose.Pose) -> rosetta.utility.vector1_bool
 
"Apply" function.
 
 
 Given the pose, generate a vector of bools with entries for every residue in the pose
 indicating whether each residue is selected ("true") or not ("false").
assign(...) from builtins.PyCapsule
assign(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector,  : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector) -> rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector
class_name(...) from builtins.PyCapsule
class_name() -> str
 
Get the mover class name.
clone(...) from builtins.PyCapsule
clone(rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector) -> rosetta.core.select.residue_selector.ResidueSelector
 
Clone operator.
 
 
 Copy the current object (creating the copy on the heap) and return an owning pointer
 to the copy.  All ResidueSelectors must implement this.
get_name(...) from builtins.PyCapsule
get_name(rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector) -> str
 
Get the mover class name.
parse_my_tag(...) from builtins.PyCapsule
parse_my_tag(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector, tag : rosetta.utility.tag.Tag, datamap : rosetta.basic.datacache.DataMap) -> NoneType
 
XML parse.
 
 
 Parse RosettaScripts tags and set up this mover.
provide_xml_schema(...) from builtins.PyCapsule
provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType
 
Provide XSD information, enabling mechanical validation of input XML.
set_ab_info(...) from builtins.PyCapsule
set_ab_info(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector, ab_info : rosetta.protocols.antibody.AntibodyInfo) -> NoneType
set_region(...) from builtins.PyCapsule
set_region(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelector, region : rosetta.protocols.antibody.AntibodyRegionEnum) -> NoneType

 
class AntibodyRegionSelectorCreator(rosetta.core.select.residue_selector.ResidueSelectorCreator)
    
Method resolution order:
AntibodyRegionSelectorCreator
rosetta.core.select.residue_selector.ResidueSelectorCreator
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(handle) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator,  : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator) -> rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator
create_residue_selector(...) from builtins.PyCapsule
create_residue_selector(rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator) -> rosetta.core.select.residue_selector.ResidueSelector
keyname(...) from builtins.PyCapsule
keyname(rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator) -> str
provide_xml_schema(...) from builtins.PyCapsule
provide_xml_schema(self : rosetta.protocols.antibody.residue_selector.AntibodyRegionSelectorCreator,  : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType

 
class CDRResidueSelector(rosetta.core.select.residue_selector.ResidueSelector)
    Select CDR residues.
 
 
Method resolution order:
CDRResidueSelector
rosetta.core.select.residue_selector.ResidueSelector
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(handle) -> NoneType
 
2. __init__(self : handle, ab_info : rosetta.protocols.antibody.AntibodyInfo) -> NoneType
 
3. __init__(self : handle, ab_info : rosetta.protocols.antibody.AntibodyInfo, cdrs : rosetta.utility.vector1_protocols_antibody_CDRNameEnum) -> NoneType
 
4. __init__(self : handle, ab_info : rosetta.protocols.antibody.AntibodyInfo, cdrs : rosetta.utility.vector1_bool) -> NoneType
 
5. __init__(handle, rosetta.protocols.antibody.residue_selector.CDRResidueSelector) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
apply(...) from builtins.PyCapsule
apply(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector, pose : rosetta.core.pose.Pose) -> rosetta.utility.vector1_bool
 
"Apply" function.
 
 
 Given the pose, generate a vector of bools with entries for every residue in the pose
 indicating whether each residue is selected ("true") or not ("false").
assign(...) from builtins.PyCapsule
assign(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector,  : rosetta.protocols.antibody.residue_selector.CDRResidueSelector) -> rosetta.protocols.antibody.residue_selector.CDRResidueSelector
class_name(...) from builtins.PyCapsule
class_name() -> str
 
Get the mover class name.
clone(...) from builtins.PyCapsule
clone(rosetta.protocols.antibody.residue_selector.CDRResidueSelector) -> rosetta.core.select.residue_selector.ResidueSelector
 
Clone operator.
 
 
 Copy the current object (creating the copy on the heap) and return an owning pointer
 to the copy.  All ResidueSelectors must implement this.
get_name(...) from builtins.PyCapsule
get_name(rosetta.protocols.antibody.residue_selector.CDRResidueSelector) -> str
 
Get the mover class name.
parse_my_tag(...) from builtins.PyCapsule
parse_my_tag(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector, tag : rosetta.utility.tag.Tag, datamap : rosetta.basic.datacache.DataMap) -> NoneType
 
XML parse.
 
 
 Parse RosettaScripts tags and set up this mover.
provide_xml_schema(...) from builtins.PyCapsule
provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType
 
Provide XSD information, enabling mechanical validation of input XML.
set_ab_info(...) from builtins.PyCapsule
set_ab_info(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector, ab_info : rosetta.protocols.antibody.AntibodyInfo) -> NoneType
set_cdrs(...) from builtins.PyCapsule
set_cdrs(*args, **kwargs)
Overloaded function.
 
1. set_cdrs(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector, cdrs : rosetta.utility.vector1_bool) -> NoneType
 
2. set_cdrs(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelector, cdrs : rosetta.utility.vector1_protocols_antibody_CDRNameEnum) -> NoneType

 
class CDRResidueSelectorCreator(rosetta.core.select.residue_selector.ResidueSelectorCreator)
    
Method resolution order:
CDRResidueSelectorCreator
rosetta.core.select.residue_selector.ResidueSelectorCreator
builtins.object

Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(handle) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator,  : rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator) -> rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator
create_residue_selector(...) from builtins.PyCapsule
create_residue_selector(rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator) -> rosetta.core.select.residue_selector.ResidueSelector
keyname(...) from builtins.PyCapsule
keyname(rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator) -> str
provide_xml_schema(...) from builtins.PyCapsule
provide_xml_schema(self : rosetta.protocols.antibody.residue_selector.CDRResidueSelectorCreator,  : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType