rosetta.core.scoring.power_diagram
index
(built-in)

Bindings for core::scoring::power_diagram namespace

 
Classes
       
builtins.object
PDinter
PDsphere
PDvertex
PowerDiagram
SAnode

 
class PDinter(builtins.object)
    /////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
 
  Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(self : rosetta.core.scoring.power_diagram.PDinter, xyz : rosetta.numeric.xyzVector_double_t, v1 : core::scoring::power_diagram::PDvertex, v2 : core::scoring::power_diagram::PDvertex) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
add_atom(...) from builtins.PyCapsule
add_atom(self : rosetta.core.scoring.power_diagram.PDinter, pa : core::scoring::power_diagram::PDsphere) -> NoneType
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.power_diagram.PDinter,  : rosetta.core.scoring.power_diagram.PDinter) -> rosetta.core.scoring.power_diagram.PDinter
atoms(...) from builtins.PyCapsule
atoms(rosetta.core.scoring.power_diagram.PDinter) -> rosetta.utility.vector1_std_shared_ptr_const_core_scoring_power_diagram_PDsphere_t
circle(...) from builtins.PyCapsule
circle(rosetta.core.scoring.power_diagram.PDinter) -> bool
vrt1(...) from builtins.PyCapsule
vrt1(rosetta.core.scoring.power_diagram.PDinter) -> core::scoring::power_diagram::PDvertex
vrt2(...) from builtins.PyCapsule
vrt2(rosetta.core.scoring.power_diagram.PDinter) -> core::scoring::power_diagram::PDvertex
xyz(...) from builtins.PyCapsule
xyz(rosetta.core.scoring.power_diagram.PDinter) -> rosetta.numeric.xyzVector_double_t

 
class PDsphere(builtins.object)
    /////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
 
  Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(rosetta.core.scoring.power_diagram.PDsphere) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.power_diagram.PDsphere,  : rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.core.scoring.power_diagram.PDsphere
atom(...) from builtins.PyCapsule
atom(rosetta.core.scoring.power_diagram.PDsphere) -> int
cycles(...) from builtins.PyCapsule
cycles(rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.utility.vector1_utility_vector1_core_scoring_power_diagram_SAnode_std_allocator_core_scoring_power_diagram_SAnode_t
nonconst_atom(...) from builtins.PyCapsule
nonconst_atom(rosetta.core.scoring.power_diagram.PDsphere) -> int
nonconst_rad(...) from builtins.PyCapsule
nonconst_rad(rosetta.core.scoring.power_diagram.PDsphere) -> float
nonconst_rad2(...) from builtins.PyCapsule
nonconst_rad2(rosetta.core.scoring.power_diagram.PDsphere) -> float
nonconst_res(...) from builtins.PyCapsule
nonconst_res(rosetta.core.scoring.power_diagram.PDsphere) -> int
nonconst_xyz(...) from builtins.PyCapsule
nonconst_xyz(rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.numeric.xyzVector_double_t
rad(...) from builtins.PyCapsule
rad(rosetta.core.scoring.power_diagram.PDsphere) -> float
rad2(...) from builtins.PyCapsule
rad2(rosetta.core.scoring.power_diagram.PDsphere) -> float
res(...) from builtins.PyCapsule
res(rosetta.core.scoring.power_diagram.PDsphere) -> int
vertices(...) from builtins.PyCapsule
vertices(rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.std.list_std_shared_ptr_core_scoring_power_diagram_PDvertex_std_allocator_std_shared_ptr_core_scoring_power_diagram_PDvertex_t
xyz(...) from builtins.PyCapsule
xyz(rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.numeric.xyzVector_double_t

 
class PDvertex(builtins.object)
    /////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
 
  Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(rosetta.core.scoring.power_diagram.PDvertex) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.power_diagram.PDvertex,  : rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.core.scoring.power_diagram.PDvertex
direction(...) from builtins.PyCapsule
direction(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.numeric.xyzVector_double_t
finite(...) from builtins.PyCapsule
finite(rosetta.core.scoring.power_diagram.PDvertex) -> bool
generators(...) from builtins.PyCapsule
generators(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.utility.vector1_std_shared_ptr_core_scoring_power_diagram_PDsphere_t
id(...) from builtins.PyCapsule
id(rosetta.core.scoring.power_diagram.PDvertex) -> int
live(...) from builtins.PyCapsule
live(rosetta.core.scoring.power_diagram.PDvertex) -> bool
my_itr(...) from builtins.PyCapsule
my_itr(rosetta.core.scoring.power_diagram.PDvertex) -> std::_List_iterator<std::shared_ptr<core::scoring::power_diagram::PDvertex> >
nonconst_direction(...) from builtins.PyCapsule
nonconst_direction(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.numeric.xyzVector_double_t
nonconst_generators(...) from builtins.PyCapsule
nonconst_generators(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.utility.vector1_std_shared_ptr_core_scoring_power_diagram_PDsphere_t
nonconst_id(...) from builtins.PyCapsule
nonconst_id(rosetta.core.scoring.power_diagram.PDvertex) -> int
nonconst_partners(...) from builtins.PyCapsule
nonconst_partners(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.utility.vector1_std_shared_ptr_core_scoring_power_diagram_PDvertex_t
nonconst_power(...) from builtins.PyCapsule
nonconst_power(rosetta.core.scoring.power_diagram.PDvertex) -> float
nonconst_xyz(...) from builtins.PyCapsule
nonconst_xyz(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.numeric.xyzVector_double_t
partners(...) from builtins.PyCapsule
partners(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.utility.vector1_std_shared_ptr_core_scoring_power_diagram_PDvertex_t
power(...) from builtins.PyCapsule
power(rosetta.core.scoring.power_diagram.PDvertex) -> float
set_finite(...) from builtins.PyCapsule
set_finite(self : rosetta.core.scoring.power_diagram.PDvertex, in_val : bool) -> NoneType
set_live(...) from builtins.PyCapsule
set_live(self : rosetta.core.scoring.power_diagram.PDvertex, in_val : bool) -> NoneType
xyz(...) from builtins.PyCapsule
xyz(rosetta.core.scoring.power_diagram.PDvertex) -> rosetta.numeric.xyzVector_double_t

 
class PowerDiagram(builtins.object)
    /////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
 
  Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(rosetta.core.scoring.power_diagram.PowerDiagram) -> NoneType
 
2. __init__(self : rosetta.core.scoring.power_diagram.PowerDiagram, pose : rosetta.core.pose.Pose) -> NoneType
 
3. __init__(self : rosetta.core.scoring.power_diagram.PowerDiagram,  : rosetta.core.scoring.power_diagram.PowerDiagram) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
add_single_atom_to_power_diagram(...) from builtins.PyCapsule
add_single_atom_to_power_diagram(self : rosetta.core.scoring.power_diagram.PowerDiagram, new_atm : rosetta.core.scoring.power_diagram.PDsphere) -> NoneType
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.power_diagram.PowerDiagram, pd : rosetta.core.scoring.power_diagram.PowerDiagram) -> rosetta.core.scoring.power_diagram.PowerDiagram
 
copy assignment
clear(...) from builtins.PyCapsule
clear(rosetta.core.scoring.power_diagram.PowerDiagram) -> NoneType
 
Clear all data from power diagram
construct_from_pose(...) from builtins.PyCapsule
construct_from_pose(self : rosetta.core.scoring.power_diagram.PowerDiagram, p : rosetta.core.pose.Pose) -> NoneType
extract_sasa_for_atom(...) from builtins.PyCapsule
extract_sasa_for_atom(self : rosetta.core.scoring.power_diagram.PowerDiagram, ires : int, iatm : int) -> float
make_initial_power_diagram(...) from builtins.PyCapsule
make_initial_power_diagram(rosetta.core.scoring.power_diagram.PowerDiagram) -> NoneType
make_new_sphere(...) from builtins.PyCapsule
make_new_sphere(self : rosetta.core.scoring.power_diagram.PowerDiagram, p : rosetta.core.pose.Pose, ires : int, iatm : int) -> rosetta.core.scoring.power_diagram.PDsphere
sphere_lookup(...) from builtins.PyCapsule
sphere_lookup(self : rosetta.core.scoring.power_diagram.PowerDiagram, ires : int, iatm : int) -> rosetta.core.scoring.power_diagram.PDsphere
store_new_sphere(...) from builtins.PyCapsule
store_new_sphere(self : rosetta.core.scoring.power_diagram.PowerDiagram, new_sph : rosetta.core.scoring.power_diagram.PDsphere) -> NoneType
vertex_count(...) from builtins.PyCapsule
vertex_count(rosetta.core.scoring.power_diagram.PowerDiagram) -> int

 
class SAnode(builtins.object)
    /////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
/////////////////////////////////////////////////////////////////
 
  Methods defined here:
__init__(...) from builtins.PyCapsule
__init__(*args, **kwargs)
Overloaded function.
 
1. __init__(self : rosetta.core.scoring.power_diagram.SAnode, inter : rosetta.core.scoring.power_diagram.PDinter, other_atom : core::scoring::power_diagram::PDsphere, ct : float, phi : float) -> NoneType
 
2. __init__(self : rosetta.core.scoring.power_diagram.SAnode, inter : rosetta.core.scoring.power_diagram.PDinter, other_atom : core::scoring::power_diagram::PDsphere) -> NoneType
__new__(*args, **kwargs) from builtins.type
Create and return a new object.  See help(type) for accurate signature.
assign(...) from builtins.PyCapsule
assign(self : rosetta.core.scoring.power_diagram.SAnode,  : rosetta.core.scoring.power_diagram.SAnode) -> rosetta.core.scoring.power_diagram.SAnode
cos_theta(...) from builtins.PyCapsule
cos_theta(rosetta.core.scoring.power_diagram.SAnode) -> float
inter(...) from builtins.PyCapsule
inter(rosetta.core.scoring.power_diagram.SAnode) -> rosetta.core.scoring.power_diagram.PDinter
other_atom(...) from builtins.PyCapsule
other_atom(rosetta.core.scoring.power_diagram.SAnode) -> core::scoring::power_diagram::PDsphere
phi(...) from builtins.PyCapsule
phi(rosetta.core.scoring.power_diagram.SAnode) -> float
set_cos_theta(...) from builtins.PyCapsule
set_cos_theta(self : rosetta.core.scoring.power_diagram.SAnode, ct : float) -> NoneType
set_phi(...) from builtins.PyCapsule
set_phi(self : rosetta.core.scoring.power_diagram.SAnode, p : float) -> NoneType
xyz(...) from builtins.PyCapsule
xyz(rosetta.core.scoring.power_diagram.SAnode) -> rosetta.numeric.xyzVector_double_t

 
Functions
       
find_common_intersection_atoms(...) method of builtins.PyCapsule instance
find_common_intersection_atoms(inter : rosetta.core.scoring.power_diagram.PDinter) -> NoneType
find_intersections(...) method of builtins.PyCapsule instance
find_intersections(patom : rosetta.core.scoring.power_diagram.PDsphere, start_pt : rosetta.numeric.xyzVector_double_t, dir : rosetta.numeric.xyzVector_double_t, max_extent : float) -> bool
get_area_from_cycle(...) method of builtins.PyCapsule instance
get_area_from_cycle(this_atom : rosetta.core.scoring.power_diagram.PDsphere, cycle : rosetta.utility.vector1_core_scoring_power_diagram_SAnode) -> float
get_derivs_from_cycle(...) method of builtins.PyCapsule instance
get_derivs_from_cycle(cycle : rosetta.utility.vector1_core_scoring_power_diagram_SAnode, this_atom : rosetta.core.scoring.power_diagram.PDsphere, check_atom : rosetta.core.scoring.power_diagram.PDsphere, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> NoneType
get_derivs_from_cycles(...) method of builtins.PyCapsule instance
get_derivs_from_cycles(cycles : rosetta.utility.vector1_utility_vector1_core_scoring_power_diagram_SAnode_std_allocator_core_scoring_power_diagram_SAnode_t, this_atom : rosetta.core.scoring.power_diagram.PDsphere, check_atom : rosetta.core.scoring.power_diagram.PDsphere, f1 : rosetta.numeric.xyzVector_double_t, f2 : rosetta.numeric.xyzVector_double_t) -> NoneType
get_sasa_from_cycles(...) method of builtins.PyCapsule instance
get_sasa_from_cycles(cycles : rosetta.utility.vector1_utility_vector1_core_scoring_power_diagram_SAnode_std_allocator_core_scoring_power_diagram_SAnode_t, this_atom : rosetta.core.scoring.power_diagram.PDsphere) -> float
link_vertex_to_generators(...) method of builtins.PyCapsule instance
link_vertex_to_generators(vrt : rosetta.core.scoring.power_diagram.PDvertex) -> NoneType
power_distance(...) method of builtins.PyCapsule instance
power_distance(pt : rosetta.numeric.xyzVector_double_t, sph : rosetta.core.scoring.power_diagram.PDsphere) -> float
print_generators(...) method of builtins.PyCapsule instance
print_generators(vrt : rosetta.core.scoring.power_diagram.PDvertex) -> NoneType
print_partners(...) method of builtins.PyCapsule instance
print_partners(vrt : rosetta.core.scoring.power_diagram.PDvertex) -> NoneType
print_vertices(...) method of builtins.PyCapsule instance
print_vertices(*args, **kwargs)
Overloaded function.
 
1. print_vertices(fv : rosetta.std.list_std_shared_ptr_core_scoring_power_diagram_PDvertex_std_allocator_std_shared_ptr_core_scoring_power_diagram_PDvertex_t, iv : rosetta.std.list_std_shared_ptr_core_scoring_power_diagram_PDvertex_std_allocator_std_shared_ptr_core_scoring_power_diagram_PDvertex_t) -> NoneType
 
2. print_vertices(v : rosetta.std.list_std_shared_ptr_core_scoring_power_diagram_PDvertex_std_allocator_std_shared_ptr_core_scoring_power_diagram_PDvertex_t) -> NoneType
share_axis_atoms(...) method of builtins.PyCapsule instance
share_axis_atoms(v1 : rosetta.core.scoring.power_diagram.PDinter, a1 : rosetta.core.scoring.power_diagram.PDsphere, a2 : rosetta.core.scoring.power_diagram.PDsphere) -> bool
vertex_xyz_from_generators(...) method of builtins.PyCapsule instance
vertex_xyz_from_generators(*args, **kwargs)
Overloaded function.
 
1. vertex_xyz_from_generators(a1 : rosetta.core.scoring.power_diagram.PDsphere, a2 : rosetta.core.scoring.power_diagram.PDsphere, a3 : rosetta.core.scoring.power_diagram.PDsphere, a4 : rosetta.core.scoring.power_diagram.PDsphere) -> rosetta.numeric.xyzVector_double_t
 
2. vertex_xyz_from_generators(gen : rosetta.utility.vector1_std_shared_ptr_core_scoring_power_diagram_PDsphere_t) -> rosetta.numeric.xyzVector_double_t