Bindings for core::pack::task::operation namespace

Classes
		builtins.object ExtraRotamerSamplingData ResFilter ChainIs ChainIsnt ResFilterComposition AllResFilter AnyResFilter NoResFilter ResidueHasProperty ResidueLacksProperty ResidueIndexIs ResidueIndexIsnt ResidueName3Is ResidueName3Isnt ResiduePDBIndexIs ResiduePDBIndexIsnt ResiduePDBInfoHasLabel ResiduePDBInfoLacksLabel ResidueTypeFilter ResFilterCreator AllResFilterCreator AnyResFilterCreator ChainIsCreator ChainIsntCreator NoResFilterCreator ResidueHasPropertyCreator ResidueIndexIsCreator ResidueIndexIsntCreator ResidueLacksPropertyCreator ResidueName3IsCreator ResidueName3IsntCreator ResiduePDBIndexIsCreator ResiduePDBIndexIsntCreator ResiduePDBInfoHasLabelCreator ResiduePDBInfoLacksLabelCreator ResidueTypeFilterCreator ResFilterFactory ResLvlTaskOperation AddBehaviorRLT DisallowIfNonnativeRLT ExtraChiCutoffRLT ExtraRotamersGenericRLT IncludeCurrentRLT PreserveCBetaRLT PreventRepackingRLT RestrictAbsentCanonicalAASRLT RestrictToRepackingRLT ResLvlTaskOperationCreator AddBehaviorRLTCreator DisallowIfNonnativeRLTCreator ExtraChiCutoffRLTCreator ExtraRotamersGenericRLTCreator IncludeCurrentRLTCreator PreserveCBetaRLTCreator PreventRepackingRLTCreator RestrictAbsentCanonicalAASRLTCreator RestrictToRepackingRLTCreator TaskOperation AppendResidueRotamerSet AppendRotamer AppendRotamerSet DisallowIfNonnative ExtraChiCutoff ExtraRotamers ExtraRotamersGeneric IncludeCurrent InitializeExtraRotsFromCommandline InitializeFromCommandline InitializeFromOptionCollection NoRepackDisulfides OperateOnCertainResidues OperateOnResidueSubset OptCysHG OptH PreserveCBeta PreventRepacking ReadResfile ReadResfileAndObeyLengthEvents ReplicateTask RestrictAbsentCanonicalAAS RestrictResidueToRepacking RestrictToRepacking RestrictYSDesign RotamerExplosion SetRotamerCouplings SetRotamerLinks TaskOperationCreator AppendResidueRotamerSetCreator AppendRotamerCreator AppendRotamerSetCreator DisallowIfNonnativeCreator ExtraChiCutoffCreator ExtraRotamersCreator ExtraRotamersGenericCreator IncludeCurrentCreator InitializeExtraRotsFromCommandlineCreator InitializeFromCommandlineCreator InitializeFromOptionCollectionCreator NoRepackDisulfidesCreator OperateOnCertainResiduesCreator OperateOnResidueSubsetCreator OptCysHGCreator OptHCreator PreserveCBetaCreator PreventRepackingCreator ReadResfileAndObeyLengthEventsCreator ReadResfileCreator RestrictAbsentCanonicalAASCreator RestrictResidueToRepackingCreator RestrictToRepackingCreator RestrictYSDesignCreator RotamerExplosionCreator SetRotamerCouplingsCreator SetRotamerLinksCreator TaskOperationFactory rosetta.utility.SingletonBase_core_pack_task_operation_ResLvlTaskOperationFactory_t(builtins.object) ResLvlTaskOperationFactory   class AddBehaviorRLT(ResLvlTaskOperation)       Method resolution order: AddBehaviorRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, behavior : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.AddBehaviorRLT) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.AddBehaviorRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AddBehaviorRLT,  : rosetta.core.pack.task.operation.AddBehaviorRLT) -> rosetta.core.pack.task.operation.AddBehaviorRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AddBehaviorRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.AddBehaviorRLT,  : rosetta.utility.tag.Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AddBehaviorRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: AddBehaviorRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AddBehaviorRLTCreator,  : rosetta.core.pack.task.operation.AddBehaviorRLTCreator) -> rosetta.core.pack.task.operation.AddBehaviorRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.AddBehaviorRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AddBehaviorRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AddBehaviorRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AllResFilter(ResFilterComposition)       Method resolution order: AllResFilter ResFilterComposition ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.AllResFilter,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_ResFilter_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AllResFilter,  : rosetta.core.pack.task.operation.AllResFilter) -> rosetta.core.pack.task.operation.AllResFilter clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AllResFilter) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResFilterComposition: define_composition_schema(...) from builtins.PyCapsule define_composition_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.utility.tag.XMLSchemaComplexTypeGenerator parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResFilterComposition,  : utility::tag::Tag) -> NoneType   class AllResFilterCreator(ResFilterCreator)       Method resolution order: AllResFilterCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AllResFilterCreator,  : rosetta.core.pack.task.operation.AllResFilterCreator) -> rosetta.core.pack.task.operation.AllResFilterCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.AllResFilterCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AllResFilterCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AllResFilterCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AnyResFilter(ResFilterComposition)       Method resolution order: AnyResFilter ResFilterComposition ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.AnyResFilter,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_ResFilter_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AnyResFilter,  : rosetta.core.pack.task.operation.AnyResFilter) -> rosetta.core.pack.task.operation.AnyResFilter clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AnyResFilter) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResFilterComposition: define_composition_schema(...) from builtins.PyCapsule define_composition_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.utility.tag.XMLSchemaComplexTypeGenerator parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResFilterComposition,  : utility::tag::Tag) -> NoneType   class AnyResFilterCreator(ResFilterCreator)       Method resolution order: AnyResFilterCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AnyResFilterCreator,  : rosetta.core.pack.task.operation.AnyResFilterCreator) -> rosetta.core.pack.task.operation.AnyResFilterCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.AnyResFilterCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AnyResFilterCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AnyResFilterCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AppendResidueRotamerSet(TaskOperation)     Apply rotamerSetOperation to only the rotamerSet for the given residue     Tim Jacobs (2011)     Method resolution order: AppendResidueRotamerSet TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, resnum : int, rotamer_set_operation : rosetta.core.pack.rotamer_set.RotamerSetOperation) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.AppendResidueRotamerSet) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.AppendResidueRotamerSet,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendResidueRotamerSet,  : rosetta.core.pack.task.operation.AppendResidueRotamerSet) -> rosetta.core.pack.task.operation.AppendResidueRotamerSet clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AppendResidueRotamerSet) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType set_resnum(...) from builtins.PyCapsule set_resnum(self : rosetta.core.pack.task.operation.AppendResidueRotamerSet, resnum : int) -> NoneType set_rotamer_set_operation(...) from builtins.PyCapsule set_rotamer_set_operation(self : rosetta.core.pack.task.operation.AppendResidueRotamerSet, rotamer_operation : rosetta.core.pack.rotamer_set.RotamerSetOperation) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class AppendResidueRotamerSetCreator(TaskOperationCreator)       Method resolution order: AppendResidueRotamerSetCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator,  : rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator) -> rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AppendResidueRotamerSetCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AppendRotamer(TaskOperation)     when a PackerTask is created by the Factory, the RotamerOperation will be given to it     Method resolution order: AppendRotamer TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, rotamer_operation : rosetta.core.pack.rotamer_set.RotamerOperation) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.AppendRotamer) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.AppendRotamer,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendRotamer,  : rosetta.core.pack.task.operation.AppendRotamer) -> rosetta.core.pack.task.operation.AppendRotamer clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AppendRotamer) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType set_rotamer_operation(...) from builtins.PyCapsule set_rotamer_operation(self : rosetta.core.pack.task.operation.AppendRotamer, rotamer_operation : rosetta.core.pack.rotamer_set.RotamerOperation) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class AppendRotamerCreator(TaskOperationCreator)       Method resolution order: AppendRotamerCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendRotamerCreator,  : rosetta.core.pack.task.operation.AppendRotamerCreator) -> rosetta.core.pack.task.operation.AppendRotamerCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.AppendRotamerCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AppendRotamerCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AppendRotamerCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class AppendRotamerSet(TaskOperation)     when a PackerTask is created by the Factory, the RotamerSetOperation will be given to it     Barak Raveh (Dec 2008)     Method resolution order: AppendRotamerSet TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, rotamer_set_operation : rosetta.core.pack.rotamer_set.RotamerSetOperation) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.AppendRotamerSet) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.AppendRotamerSet,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendRotamerSet,  : rosetta.core.pack.task.operation.AppendRotamerSet) -> rosetta.core.pack.task.operation.AppendRotamerSet clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.AppendRotamerSet) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType set_rotamer_set_operation(...) from builtins.PyCapsule set_rotamer_set_operation(self : rosetta.core.pack.task.operation.AppendRotamerSet, rotamer_operation : rosetta.core.pack.rotamer_set.RotamerSetOperation) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class AppendRotamerSetCreator(TaskOperationCreator)       Method resolution order: AppendRotamerSetCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.AppendRotamerSetCreator,  : rosetta.core.pack.task.operation.AppendRotamerSetCreator) -> rosetta.core.pack.task.operation.AppendRotamerSetCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.AppendRotamerSetCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.AppendRotamerSetCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.AppendRotamerSetCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ChainIs(ResFilter)       Method resolution order: ChainIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ChainIs,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ChainIs,  : rosetta.core.pack.task.operation.ChainIs) -> rosetta.core.pack.task.operation.ChainIs chain(...) from builtins.PyCapsule chain(rosetta.core.pack.task.operation.ChainIs) -> str clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ChainIs) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ChainIs,  : utility::tag::Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ChainIsCreator(ResFilterCreator)       Method resolution order: ChainIsCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ChainIsCreator,  : rosetta.core.pack.task.operation.ChainIsCreator) -> rosetta.core.pack.task.operation.ChainIsCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ChainIsCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ChainIsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ChainIsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ChainIsnt(ChainIs)       Method resolution order: ChainIsnt ChainIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ChainIsnt,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ChainIsnt,  : rosetta.core.pack.task.operation.ChainIsnt) -> rosetta.core.pack.task.operation.ChainIsnt clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ChainIsnt) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ChainIs: chain(...) from builtins.PyCapsule chain(rosetta.core.pack.task.operation.ChainIs) -> str get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ChainIs,  : utility::tag::Tag) -> NoneType   class ChainIsntCreator(ResFilterCreator)       Method resolution order: ChainIsntCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ChainIsntCreator,  : rosetta.core.pack.task.operation.ChainIsntCreator) -> rosetta.core.pack.task.operation.ChainIsntCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ChainIsntCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ChainIsntCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ChainIsntCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class DisallowIfNonnative(TaskOperation)     DisallowIfNonnative allows you to define what residues are NOT allowed in packing unless that residue is present in the input.  Behaves like RestrictAbsentCanonicalAAS and NOTAA except will allow  a resitricted residue at a position if it is there to begin with at the time of Task creation.  Will do all residues unless otherwise defined by selection syntax below     Method resolution order: DisallowIfNonnative TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, disallowed_aas : rosetta.utility.vector1_bool) -> NoneType   3. __init__(self : handle, disallowed_aas : rosetta.utility.vector1_bool, res_selection : rosetta.utility.vector1_unsigned_long) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.DisallowIfNonnative,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.DisallowIfNonnative,  : rosetta.core.pack.task.operation.DisallowIfNonnative) -> rosetta.core.pack.task.operation.DisallowIfNonnative clear(...) from builtins.PyCapsule clear(rosetta.core.pack.task.operation.DisallowIfNonnative) -> NoneType clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.DisallowIfNonnative) -> rosetta.core.pack.task.operation.TaskOperation disallow_aas(...) from builtins.PyCapsule disallow_aas(*args, **kwargs) Overloaded function.   1. disallow_aas(self : rosetta.core.pack.task.operation.DisallowIfNonnative, cannonical_disallowed : rosetta.utility.vector1_bool) -> NoneType   2. disallow_aas(self : rosetta.core.pack.task.operation.DisallowIfNonnative, aa_string : str) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.DisallowIfNonnative,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType restrict_to_residue(...) from builtins.PyCapsule restrict_to_residue(*args, **kwargs) Overloaded function.   1. restrict_to_residue(self : rosetta.core.pack.task.operation.DisallowIfNonnative, resid : int) -> NoneType   2. restrict_to_residue(self : rosetta.core.pack.task.operation.DisallowIfNonnative, residues : rosetta.utility.vector1_unsigned_long) -> NoneType   class DisallowIfNonnativeCreator(TaskOperationCreator)       Method resolution order: DisallowIfNonnativeCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.DisallowIfNonnativeCreator,  : rosetta.core.pack.task.operation.DisallowIfNonnativeCreator) -> rosetta.core.pack.task.operation.DisallowIfNonnativeCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.DisallowIfNonnativeCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.DisallowIfNonnativeCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.DisallowIfNonnativeCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class DisallowIfNonnativeRLT(ResLvlTaskOperation)       Method resolution order: DisallowIfNonnativeRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, disallowed_aas : rosetta.utility.vector1_bool) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT, rlt : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT,  : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT) -> rosetta.core.pack.task.operation.DisallowIfNonnativeRLT clear(...) from builtins.PyCapsule clear(rosetta.core.pack.task.operation.DisallowIfNonnativeRLT) -> NoneType clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.DisallowIfNonnativeRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation disallow_aas(...) from builtins.PyCapsule disallow_aas(*args, **kwargs) Overloaded function.   1. disallow_aas(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT, cannonical_disallowed : rosetta.utility.vector1_bool) -> NoneType   2. disallow_aas(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT, aa_string : str) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLT,  : rosetta.utility.tag.Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class DisallowIfNonnativeRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: DisallowIfNonnativeRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator,  : rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator) -> rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.DisallowIfNonnativeRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraChiCutoff(TaskOperation)     ExtraChiCutoff (correponding to flag "-extrachi_cutoff <float>" )     Method resolution order: ExtraChiCutoff TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, resid : int, extrachi_cutoff : int) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ExtraChiCutoff,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraChiCutoff,  : rosetta.core.pack.task.operation.ExtraChiCutoff) -> rosetta.core.pack.task.operation.ExtraChiCutoff clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ExtraChiCutoff) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ExtraChiCutoff,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraChiCutoffCreator(TaskOperationCreator)       Method resolution order: ExtraChiCutoffCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraChiCutoffCreator,  : rosetta.core.pack.task.operation.ExtraChiCutoffCreator) -> rosetta.core.pack.task.operation.ExtraChiCutoffCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.ExtraChiCutoffCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ExtraChiCutoffCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ExtraChiCutoffCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraChiCutoffRLT(ResLvlTaskOperation)       Method resolution order: ExtraChiCutoffRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ExtraChiCutoffRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraChiCutoffRLT,  : rosetta.core.pack.task.operation.ExtraChiCutoffRLT) -> rosetta.core.pack.task.operation.ExtraChiCutoffRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ExtraChiCutoffRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ExtraChiCutoffRLT,  : rosetta.utility.tag.Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraChiCutoffRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: ExtraChiCutoffRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator,  : rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator) -> rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ExtraChiCutoffRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraRotamerSamplingData(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.ExtraRotamerSamplingData) -> NoneType   2. __init__(self : rosetta.core.pack.task.operation.ExtraRotamerSamplingData,  : rosetta.core.pack.task.operation.ExtraRotamerSamplingData) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamerSamplingData,  : rosetta.core.pack.task.operation.ExtraRotamerSamplingData) -> rosetta.core.pack.task.operation.ExtraRotamerSamplingData Data descriptors defined here: ex1_ ex1_sample_level_ ex1aro_ ex1aro_exposed_ ex1aro_exposed_sample_level_ ex1aro_sample_level_ ex2_ ex2_sample_level_ ex2aro_ ex2aro_exposed_ ex2aro_exposed_sample_level_ ex2aro_sample_level_ ex3_ ex3_sample_level_ ex4_ ex4_sample_level_ exdna_sample_level_ extrachi_cutoff_   class ExtraRotamers(TaskOperation)     ExtraRotamer for a residue. You know, -ex1, -ex2, all that.     Method resolution order: ExtraRotamers TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, int, int) -> NoneType   doc   3. __init__(self : handle, resid : int, chi : int, level : int) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ExtraRotamers,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamers,  : rosetta.core.pack.task.operation.ExtraRotamers) -> rosetta.core.pack.task.operation.ExtraRotamers clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ExtraRotamers) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ExtraRotamers,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraRotamersCreator(TaskOperationCreator)       Method resolution order: ExtraRotamersCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamersCreator,  : rosetta.core.pack.task.operation.ExtraRotamersCreator) -> rosetta.core.pack.task.operation.ExtraRotamersCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.ExtraRotamersCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ExtraRotamersCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ExtraRotamersCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraRotamersGeneric(TaskOperation)     control the extra chi rotamers for all residues     Method resolution order: ExtraRotamersGeneric TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.ExtraRotamersGeneric) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric,  : rosetta.core.pack.task.operation.ExtraRotamersGeneric) -> rosetta.core.pack.task.operation.ExtraRotamersGeneric clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ExtraRotamersGeneric) -> rosetta.core.pack.task.operation.TaskOperation ex1(...) from builtins.PyCapsule ex1(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex1_sample_level(...) from builtins.PyCapsule ex1_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex1aro(...) from builtins.PyCapsule ex1aro(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex1aro_exposed(...) from builtins.PyCapsule ex1aro_exposed(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex1aro_exposed_sample_level(...) from builtins.PyCapsule ex1aro_exposed_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex1aro_sample_level(...) from builtins.PyCapsule ex1aro_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2(...) from builtins.PyCapsule ex2(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex2_sample_level(...) from builtins.PyCapsule ex2_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2aro(...) from builtins.PyCapsule ex2aro(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex2aro_exposed(...) from builtins.PyCapsule ex2aro_exposed(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex2aro_exposed_sample_level(...) from builtins.PyCapsule ex2aro_exposed_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2aro_sample_level(...) from builtins.PyCapsule ex2aro_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex3(...) from builtins.PyCapsule ex3(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex3_sample_level(...) from builtins.PyCapsule ex3_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex4(...) from builtins.PyCapsule ex4(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : bool) -> NoneType ex4_sample_level(...) from builtins.PyCapsule ex4_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType exdna_sample_level(...) from builtins.PyCapsule exdna_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType extrachi_cutoff(...) from builtins.PyCapsule extrachi_cutoff(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric, value : int) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ExtraRotamersGeneric,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType sampling_data(...) from builtins.PyCapsule sampling_data(rosetta.core.pack.task.operation.ExtraRotamersGeneric) -> rosetta.core.pack.task.operation.ExtraRotamerSamplingData   class ExtraRotamersGenericCreator(TaskOperationCreator)       Method resolution order: ExtraRotamersGenericCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamersGenericCreator,  : rosetta.core.pack.task.operation.ExtraRotamersGenericCreator) -> rosetta.core.pack.task.operation.ExtraRotamersGenericCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.ExtraRotamersGenericCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ExtraRotamersGenericCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ExtraRotamersGenericCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ExtraRotamersGenericRLT(ResLvlTaskOperation)       Method resolution order: ExtraRotamersGenericRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT,  : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT) -> rosetta.core.pack.task.operation.ExtraRotamersGenericRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ExtraRotamersGenericRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation ex1(...) from builtins.PyCapsule ex1(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex1_sample_level(...) from builtins.PyCapsule ex1_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex1aro(...) from builtins.PyCapsule ex1aro(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex1aro_exposed(...) from builtins.PyCapsule ex1aro_exposed(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex1aro_exposed_sample_level(...) from builtins.PyCapsule ex1aro_exposed_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex1aro_sample_level(...) from builtins.PyCapsule ex1aro_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2(...) from builtins.PyCapsule ex2(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex2_sample_level(...) from builtins.PyCapsule ex2_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2aro(...) from builtins.PyCapsule ex2aro(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex2aro_exposed(...) from builtins.PyCapsule ex2aro_exposed(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex2aro_exposed_sample_level(...) from builtins.PyCapsule ex2aro_exposed_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex2aro_sample_level(...) from builtins.PyCapsule ex2aro_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex3(...) from builtins.PyCapsule ex3(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex3_sample_level(...) from builtins.PyCapsule ex3_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType ex4(...) from builtins.PyCapsule ex4(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : bool) -> NoneType ex4_sample_level(...) from builtins.PyCapsule ex4_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType exdna_sample_level(...) from builtins.PyCapsule exdna_sample_level(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : rosetta.core.pack.task.ExtraRotSample) -> NoneType extrachi_cutoff(...) from builtins.PyCapsule extrachi_cutoff(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT, value : int) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLT,  : rosetta.utility.tag.Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType sampling_data(...) from builtins.PyCapsule sampling_data(rosetta.core.pack.task.operation.ExtraRotamersGenericRLT) -> rosetta.core.pack.task.operation.ExtraRotamerSamplingData   class ExtraRotamersGenericRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: ExtraRotamersGenericRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator,  : rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator) -> rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ExtraRotamersGenericRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class IncludeCurrent(TaskOperation)       Method resolution order: IncludeCurrent TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.IncludeCurrent,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.IncludeCurrent,  : rosetta.core.pack.task.operation.IncludeCurrent) -> rosetta.core.pack.task.operation.IncludeCurrent clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.IncludeCurrent) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class IncludeCurrentCreator(TaskOperationCreator)       Method resolution order: IncludeCurrentCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.IncludeCurrentCreator,  : rosetta.core.pack.task.operation.IncludeCurrentCreator) -> rosetta.core.pack.task.operation.IncludeCurrentCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.IncludeCurrentCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.IncludeCurrentCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.IncludeCurrentCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class IncludeCurrentRLT(ResLvlTaskOperation)       Method resolution order: IncludeCurrentRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.IncludeCurrentRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.IncludeCurrentRLT,  : rosetta.core.pack.task.operation.IncludeCurrentRLT) -> rosetta.core.pack.task.operation.IncludeCurrentRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.IncludeCurrentRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResLvlTaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class IncludeCurrentRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: IncludeCurrentRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.IncludeCurrentRLTCreator,  : rosetta.core.pack.task.operation.IncludeCurrentRLTCreator) -> rosetta.core.pack.task.operation.IncludeCurrentRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.IncludeCurrentRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.IncludeCurrentRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.IncludeCurrentRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class InitializeExtraRotsFromCommandline(TaskOperation)       Method resolution order: InitializeExtraRotsFromCommandline TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandline,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandline,  : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandline) -> rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandline clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandline) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class InitializeExtraRotsFromCommandlineCreator(TaskOperationCreator)       Method resolution order: InitializeExtraRotsFromCommandlineCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator,  : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator) -> rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.InitializeExtraRotsFromCommandlineCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class InitializeFromCommandline(TaskOperation)       Method resolution order: InitializeFromCommandline TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.InitializeFromCommandline,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeFromCommandline,  : rosetta.core.pack.task.operation.InitializeFromCommandline) -> rosetta.core.pack.task.operation.InitializeFromCommandline clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.InitializeFromCommandline) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.InitializeFromCommandline,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class InitializeFromCommandlineCreator(TaskOperationCreator)       Method resolution order: InitializeFromCommandlineCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeFromCommandlineCreator,  : rosetta.core.pack.task.operation.InitializeFromCommandlineCreator) -> rosetta.core.pack.task.operation.InitializeFromCommandlineCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.InitializeFromCommandlineCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.InitializeFromCommandlineCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.InitializeFromCommandlineCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class InitializeFromOptionCollection(TaskOperation)     retrieves an OptionCollection from the DataMap.     Method resolution order: InitializeFromOptionCollection TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, options : rosetta.utility.options.OptionCollection) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.InitializeFromOptionCollection) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.InitializeFromOptionCollection,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeFromOptionCollection,  : rosetta.core.pack.task.operation.InitializeFromOptionCollection) -> rosetta.core.pack.task.operation.InitializeFromOptionCollection clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.InitializeFromOptionCollection) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str options(...) from builtins.PyCapsule options(self : rosetta.core.pack.task.operation.InitializeFromOptionCollection, options : rosetta.utility.options.OptionCollection) -> NoneType parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.InitializeFromOptionCollection,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class InitializeFromOptionCollectionCreator(TaskOperationCreator)       Method resolution order: InitializeFromOptionCollectionCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator,  : rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator) -> rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.InitializeFromOptionCollectionCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class NoRepackDisulfides(TaskOperation)     prevent disulfides from being repacked; assume disulfides info in Pose is up-to-date     Method resolution order: NoRepackDisulfides TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.NoRepackDisulfides) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.NoRepackDisulfides, pose : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType   apply operations to PackerTask assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.NoRepackDisulfides,  : rosetta.core.pack.task.operation.NoRepackDisulfides) -> rosetta.core.pack.task.operation.NoRepackDisulfides clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.NoRepackDisulfides) -> rosetta.core.pack.task.operation.TaskOperation   clone this object keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : utility::tag::XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class NoRepackDisulfidesCreator(TaskOperationCreator)       Method resolution order: NoRepackDisulfidesCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.NoRepackDisulfidesCreator,  : rosetta.core.pack.task.operation.NoRepackDisulfidesCreator) -> rosetta.core.pack.task.operation.NoRepackDisulfidesCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.NoRepackDisulfidesCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.NoRepackDisulfidesCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.NoRepackDisulfidesCreator, xsd : utility::tag::XMLSchemaDefinition) -> NoneType   class NoResFilter(ResFilterComposition)       Method resolution order: NoResFilter ResFilterComposition ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.NoResFilter,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_ResFilter_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.NoResFilter,  : rosetta.core.pack.task.operation.NoResFilter) -> rosetta.core.pack.task.operation.NoResFilter clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.NoResFilter) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResFilterComposition: define_composition_schema(...) from builtins.PyCapsule define_composition_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.utility.tag.XMLSchemaComplexTypeGenerator parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResFilterComposition,  : utility::tag::Tag) -> NoneType   class NoResFilterCreator(ResFilterCreator)       Method resolution order: NoResFilterCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.NoResFilterCreator,  : rosetta.core.pack.task.operation.NoResFilterCreator) -> rosetta.core.pack.task.operation.NoResFilterCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.NoResFilterCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.NoResFilterCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.NoResFilterCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class OperateOnCertainResidues(TaskOperation)       Method resolution order: OperateOnCertainResidues TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : core::pack::task::operation::ResLvlTaskOperation,  : core::pack::task::operation::ResFilter) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.OperateOnCertainResidues) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : rosetta.core.pack.task.operation.OperateOnCertainResidues) -> rosetta.core.pack.task.operation.OperateOnCertainResidues clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.OperateOnCertainResidues) -> rosetta.core.pack.task.operation.TaskOperation filter(...) from builtins.PyCapsule filter(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : core::pack::task::operation::ResFilter) -> NoneType   sets an optional filter that is applied to each individual residue keyname(...) from builtins.PyCapsule keyname() -> str op(...) from builtins.PyCapsule op(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : core::pack::task::operation::ResLvlTaskOperation) -> NoneType   sets the ResLvlTaskOperation that will be applied to residues parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to construct the ResLvlTaskOperation and the ResFilter provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : utility::tag::XMLSchemaDefinition) -> NoneType residue_indices(...) from builtins.PyCapsule residue_indices(*args, **kwargs) Overloaded function.   1. residue_indices(self : rosetta.core.pack.task.operation.OperateOnCertainResidues,  : rosetta.utility.vector1_unsigned_long) -> NoneType   supports direct limitation of residues to be affected, without the need for a filter   2. residue_indices(rosetta.core.pack.task.operation.OperateOnCertainResidues) -> rosetta.utility.vector1_unsigned_long   3. residue_indices(rosetta.core.pack.task.operation.OperateOnCertainResidues) -> rosetta.utility.vector1_unsigned_long   class OperateOnCertainResiduesCreator(TaskOperationCreator)       Method resolution order: OperateOnCertainResiduesCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator,  : rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator) -> rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.OperateOnCertainResiduesCreator, xsd : utility::tag::XMLSchemaDefinition) -> NoneType   class OperateOnResidueSubset(TaskOperation)     Class, much like the OperateOnCertainResidues task operation, to apply a particular residue-level task operation on the residues identified by a ResidueSelector (Or a pre-selected subset).     Method resolution order: OperateOnResidueSubset TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, core::pack::task::operation::ResLvlTaskOperation, core::select::residue_selector::ResidueSelector) -> NoneType   doc   3. __init__(self : handle,  : core::pack::task::operation::ResLvlTaskOperation,  : core::select::residue_selector::ResidueSelector, flip_subset : bool) -> NoneType   4. __init__(self : handle,  : core::pack::task::operation::ResLvlTaskOperation, subset : rosetta.utility.vector1_bool) -> NoneType   5. __init__(handle, rosetta.core.pack.task.operation.OperateOnResidueSubset) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.OperateOnResidueSubset,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OperateOnResidueSubset,  : rosetta.core.pack.task.operation.OperateOnResidueSubset) -> rosetta.core.pack.task.operation.OperateOnResidueSubset clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.OperateOnResidueSubset) -> rosetta.core.pack.task.operation.TaskOperation flip_subset(...) from builtins.PyCapsule flip_subset(self : rosetta.core.pack.task.operation.OperateOnResidueSubset, flip : bool) -> NoneType   Flip the subset on apply.  False becomes True, True becomes False.  Easier to interact with certain RLTOP. keyname(...) from builtins.PyCapsule keyname() -> str op(...) from builtins.PyCapsule op(self : rosetta.core.pack.task.operation.OperateOnResidueSubset,  : core::pack::task::operation::ResLvlTaskOperation) -> NoneType   sets the ResLvlTaskOperation that will be applied to residues parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.OperateOnResidueSubset,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to construct the ResLvlTaskOperation and the ResFilter provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : utility::tag::XMLSchemaDefinition) -> NoneType selector(...) from builtins.PyCapsule selector(self : rosetta.core.pack.task.operation.OperateOnResidueSubset,  : core::select::residue_selector::ResidueSelector) -> NoneType   sets the ResidueSelector that will be used to determine which residues to apply the RLTOP to subset(...) from builtins.PyCapsule subset(self : rosetta.core.pack.task.operation.OperateOnResidueSubset, subset_residues : rosetta.utility.vector1_bool) -> NoneType   sets a specific subset that will be operated on instead of a selector itself.   class OperateOnResidueSubsetCreator(TaskOperationCreator)       Method resolution order: OperateOnResidueSubsetCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator,  : rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator) -> rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.OperateOnResidueSubsetCreator, xsd : utility::tag::XMLSchemaDefinition) -> NoneType   class OptCysHG(TaskOperation)     run optH on non-disulfided bonded CYS only; meant to relieve any clashes caused by swapping of CYD->CYS after calling Conformation::detect_disulfides()     Method resolution order: OptCysHG TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.OptCysHG) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.OptCysHG, pose : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType   apply operations to PackerTask assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OptCysHG,  : rosetta.core.pack.task.operation.OptCysHG) -> rosetta.core.pack.task.operation.OptCysHG clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.OptCysHG) -> rosetta.core.pack.task.operation.TaskOperation   clone this object keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class OptCysHGCreator(TaskOperationCreator)       Method resolution order: OptCysHGCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OptCysHGCreator,  : rosetta.core.pack.task.operation.OptCysHGCreator) -> rosetta.core.pack.task.operation.OptCysHGCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.OptCysHGCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.OptCysHGCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.OptCysHGCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class OptH(TaskOperation)     run optH; disallowed positions may be set to prevent optimization for those residues     Method resolution order: OptH TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.OptH) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.OptH,  : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType   apply operations to PackerTask assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OptH,  : rosetta.core.pack.task.operation.OptH) -> rosetta.core.pack.task.operation.OptH clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.OptH) -> rosetta.core.pack.task.operation.TaskOperation   clone this object disallow_resid(...) from builtins.PyCapsule disallow_resid(self : rosetta.core.pack.task.operation.OptH, resid : int) -> NoneType   prevent a position from being optimized flip_HNQ(...) from builtins.PyCapsule flip_HNQ(self : rosetta.core.pack.task.operation.OptH, flag : bool) -> NoneType   allow sidechain flips of HNQ? (default false) include_current(...) from builtins.PyCapsule include_current(self : rosetta.core.pack.task.operation.OptH, flag : bool) -> NoneType   include current sidechain rotamers? (default true) init_from_comand_line(...) from builtins.PyCapsule init_from_comand_line(self : rosetta.core.pack.task.operation.OptH, flag : bool) -> NoneType   init flags from command line? (default true) keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType use_multicool_annealer(...) from builtins.PyCapsule use_multicool_annealer(self : rosetta.core.pack.task.operation.OptH, flag : bool) -> NoneType   use multicool annealer? (default false) Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class OptHCreator(TaskOperationCreator)       Method resolution order: OptHCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.OptHCreator,  : rosetta.core.pack.task.operation.OptHCreator) -> rosetta.core.pack.task.operation.OptHCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.OptHCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.OptHCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.OptHCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class PreserveCBeta(TaskOperation)       Method resolution order: PreserveCBeta TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.PreserveCBeta,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreserveCBeta,  : rosetta.core.pack.task.operation.PreserveCBeta) -> rosetta.core.pack.task.operation.PreserveCBeta clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.PreserveCBeta) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class PreserveCBetaCreator(TaskOperationCreator)       Method resolution order: PreserveCBetaCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreserveCBetaCreator,  : rosetta.core.pack.task.operation.PreserveCBetaCreator) -> rosetta.core.pack.task.operation.PreserveCBetaCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.PreserveCBetaCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.PreserveCBetaCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.PreserveCBetaCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class PreserveCBetaRLT(ResLvlTaskOperation)       Method resolution order: PreserveCBetaRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.PreserveCBetaRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreserveCBetaRLT,  : rosetta.core.pack.task.operation.PreserveCBetaRLT) -> rosetta.core.pack.task.operation.PreserveCBetaRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.PreserveCBetaRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResLvlTaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class PreserveCBetaRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: PreserveCBetaRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreserveCBetaRLTCreator,  : rosetta.core.pack.task.operation.PreserveCBetaRLTCreator) -> rosetta.core.pack.task.operation.PreserveCBetaRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.PreserveCBetaRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.PreserveCBetaRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.PreserveCBetaRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class PreventRepacking(TaskOperation)     PreventRepacking allows you to prevent repacking (NATRO behavior) through the Factory.  Useful if you do not know the residue numbers when the resfile is created.  Note that this is unlike RestrictToRepacking; you have to specify which residues.  If PreventRepacking worked on the entire Task you'd have a do-nothing task.     Method resolution order: PreventRepacking TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.PreventRepacking) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.PreventRepacking,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreventRepacking,  : rosetta.core.pack.task.operation.PreventRepacking) -> rosetta.core.pack.task.operation.PreventRepacking clear(...) from builtins.PyCapsule clear(rosetta.core.pack.task.operation.PreventRepacking) -> NoneType clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.PreventRepacking) -> rosetta.core.pack.task.operation.TaskOperation include_residue(...) from builtins.PyCapsule include_residue(self : rosetta.core.pack.task.operation.PreventRepacking, resid : int) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.PreventRepacking,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class PreventRepackingCreator(TaskOperationCreator)       Method resolution order: PreventRepackingCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreventRepackingCreator,  : rosetta.core.pack.task.operation.PreventRepackingCreator) -> rosetta.core.pack.task.operation.PreventRepackingCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.PreventRepackingCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.PreventRepackingCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.PreventRepackingCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class PreventRepackingRLT(ResLvlTaskOperation)       Method resolution order: PreventRepackingRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.PreventRepackingRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreventRepackingRLT,  : rosetta.core.pack.task.operation.PreventRepackingRLT) -> rosetta.core.pack.task.operation.PreventRepackingRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.PreventRepackingRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResLvlTaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class PreventRepackingRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: PreventRepackingRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.PreventRepackingRLTCreator,  : rosetta.core.pack.task.operation.PreventRepackingRLTCreator) -> rosetta.core.pack.task.operation.PreventRepackingRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.PreventRepackingRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.PreventRepackingRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.PreventRepackingRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ReadResfile(TaskOperation)       Method resolution order: ReadResfile TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, options : rosetta.utility.options.OptionCollection) -> NoneType   3. __init__(self : handle, filename : str) -> NoneType   4. __init__(handle, rosetta.core.pack.task.operation.ReadResfile) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ReadResfile,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ReadResfile,  : rosetta.core.pack.task.operation.ReadResfile) -> rosetta.core.pack.task.operation.ReadResfile cache_resfile(...) from builtins.PyCapsule cache_resfile(rosetta.core.pack.task.operation.ReadResfile) -> NoneType   Read in the resfile and store it, so that it  doesn't have to be read over and over again at apply time. clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ReadResfile) -> rosetta.core.pack.task.operation.TaskOperation default_filename(...) from builtins.PyCapsule default_filename(rosetta.core.pack.task.operation.ReadResfile) -> NoneType   queries options system for resfile name filename(...) from builtins.PyCapsule filename(*args, **kwargs) Overloaded function.   1. filename(self : rosetta.core.pack.task.operation.ReadResfile, filename : str) -> NoneType   2. filename(rosetta.core.pack.task.operation.ReadResfile) -> str keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str list_options_read(...) from builtins.PyCapsule list_options_read(options : rosetta.std.list_utility_keys_VariantKey_utility_options_OptionKey_std_allocator_utility_keys_VariantKey_utility_options_OptionKey_t) -> NoneType parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ReadResfile,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType residue_selector(...) from builtins.PyCapsule residue_selector(rosetta.core.pack.task.operation.ReadResfile) -> core::select::residue_selector::ResidueSelector   Get the residue selector, if one exists.  (Const-access owning pointer).      Returns NULL pointer if one does not.      Vikram K. Mulligan (vmullig.edu). set_cached_resfile(...) from builtins.PyCapsule set_cached_resfile(self : rosetta.core.pack.task.operation.ReadResfile, file_contents : str) -> NoneType   Allows code to provide resfile contents, so that this TaskOperation doesn't directly have to  handle file i/o.  Handly on large systems (e.g. Blue Gene), where one might only want the  master process to read a file. set_residue_selector(...) from builtins.PyCapsule set_residue_selector(self : rosetta.core.pack.task.operation.ReadResfile, selector_in : core::select::residue_selector::ResidueSelector) -> NoneType   Set the residue selector.      The input selector is cloned and the clone is stored.      Vikram K. Mulligan (vmullig.edu). xml_schema_attributes(...) from builtins.PyCapsule xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t   class ReadResfileAndObeyLengthEvents(ReadResfile)     written by flo, feb 2011 class that can apply a resfile to a pose that had its length changed at some point in a protocol. A LengthEventCollector must be set in the pose's observer cache for this to work properly     Method resolution order: ReadResfileAndObeyLengthEvents ReadResfile TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents, pose : rosetta.core.pose.Pose, ptask : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents,  : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents) -> rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType resfile_commands(...) from builtins.PyCapsule resfile_commands(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEvents, resfile_seqpos : int, contents : rosetta.core.pack.task.ResfileContents, ptask : rosetta.core.pack.task.PackerTask) -> rosetta.std.list_std_shared_ptr_const_core_pack_task_ResfileCommand_std_allocator_std_shared_ptr_const_core_pack_task_ResfileCommand_t Methods inherited from ReadResfile: cache_resfile(...) from builtins.PyCapsule cache_resfile(rosetta.core.pack.task.operation.ReadResfile) -> NoneType   Read in the resfile and store it, so that it  doesn't have to be read over and over again at apply time. default_filename(...) from builtins.PyCapsule default_filename(rosetta.core.pack.task.operation.ReadResfile) -> NoneType   queries options system for resfile name filename(...) from builtins.PyCapsule filename(*args, **kwargs) Overloaded function.   1. filename(self : rosetta.core.pack.task.operation.ReadResfile, filename : str) -> NoneType   2. filename(rosetta.core.pack.task.operation.ReadResfile) -> str list_options_read(...) from builtins.PyCapsule list_options_read(options : rosetta.std.list_utility_keys_VariantKey_utility_options_OptionKey_std_allocator_utility_keys_VariantKey_utility_options_OptionKey_t) -> NoneType residue_selector(...) from builtins.PyCapsule residue_selector(rosetta.core.pack.task.operation.ReadResfile) -> core::select::residue_selector::ResidueSelector   Get the residue selector, if one exists.  (Const-access owning pointer).      Returns NULL pointer if one does not.      Vikram K. Mulligan (vmullig.edu). set_cached_resfile(...) from builtins.PyCapsule set_cached_resfile(self : rosetta.core.pack.task.operation.ReadResfile, file_contents : str) -> NoneType   Allows code to provide resfile contents, so that this TaskOperation doesn't directly have to  handle file i/o.  Handly on large systems (e.g. Blue Gene), where one might only want the  master process to read a file. set_residue_selector(...) from builtins.PyCapsule set_residue_selector(self : rosetta.core.pack.task.operation.ReadResfile, selector_in : core::select::residue_selector::ResidueSelector) -> NoneType   Set the residue selector.      The input selector is cloned and the clone is stored.      Vikram K. Mulligan (vmullig.edu). xml_schema_attributes(...) from builtins.PyCapsule xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t   class ReadResfileAndObeyLengthEventsCreator(TaskOperationCreator)       Method resolution order: ReadResfileAndObeyLengthEventsCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator,  : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator) -> rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ReadResfileAndObeyLengthEventsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ReadResfileCreator(TaskOperationCreator)       Method resolution order: ReadResfileCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ReadResfileCreator,  : rosetta.core.pack.task.operation.ReadResfileCreator) -> rosetta.core.pack.task.operation.ReadResfileCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.ReadResfileCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ReadResfileCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ReadResfileCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ReplicateTask(TaskOperation)       Method resolution order: ReplicateTask TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, native_task : rosetta.core.pack.task.PackerTask) -> NoneType   3. __init__(self : handle, native_pose : rosetta.core.pose.Pose, task_factory : rosetta.core.pack.task.TaskFactory) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ReplicateTask, pose : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ReplicateTask,  : rosetta.core.pack.task.operation.ReplicateTask) -> rosetta.core.pack.task.operation.ReplicateTask clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ReplicateTask) -> rosetta.core.pack.task.operation.TaskOperation set_native_task(...) from builtins.PyCapsule set_native_task(self : rosetta.core.pack.task.operation.ReplicateTask, native_task : rosetta.core.pack.task.PackerTask) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class ResFilter(builtins.object)       Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResFilter,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.ResFilter, rosetta.core.pack.task.operation.ResFilter) -> NoneType   2. __init__(rosetta.core.pack.task.operation.ResFilter) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResFilter,  : rosetta.core.pack.task.operation.ResFilter) -> rosetta.core.pack.task.operation.ResFilter clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResFilter) -> rosetta.core.pack.task.operation.ResFilter parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResFilter,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class ResFilterComposition(ResFilter)       Method resolution order: ResFilterComposition ResFilter builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.ResFilterComposition) -> NoneType   2. __init__(self : rosetta.core.pack.task.operation.ResFilterComposition,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_ResFilter_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResFilterComposition,  : rosetta.core.pack.task.operation.ResFilterComposition) -> rosetta.core.pack.task.operation.ResFilterComposition define_composition_schema(...) from builtins.PyCapsule define_composition_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.utility.tag.XMLSchemaComplexTypeGenerator parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResFilterComposition,  : utility::tag::Tag) -> NoneType Methods inherited from ResFilter: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResFilter,  : rosetta.core.pose.Pose,  : int) -> bool clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResFilter) -> rosetta.core.pack.task.operation.ResFilter   class ResFilterCreator(builtins.object)     The ResFilterCreator class's responsibilities are to create on demand a new ResFilter class. The ResFilterCreator must register itself with the ResFilterFactory at load time (before main() begins) so that the ResFilterFactory is ready to start creating ResFilters by the time any protocol requests one.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(rosetta.core.pack.task.operation.ResFilterCreator) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResFilterCreator,  : rosetta.core.pack.task.operation.ResFilterCreator) -> rosetta.core.pack.task.operation.ResFilterCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResFilterCreator) -> rosetta.core.pack.task.operation.ResFilter   Instantiate a new ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResFilterCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResFilterCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResFilterFactory(builtins.object)       Methods defined here: __init__(self, /, *args, **kwargs) Initialize self.  See help(type(self)) for accurate signature. __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. add_creator(...) from builtins.PyCapsule add_creator(self : rosetta.core.pack.task.operation.ResFilterFactory,  : rosetta.core.pack.task.operation.ResFilterCreator) -> NoneType   add a prototype, using its default type name as the map key assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResFilterFactory,  : rosetta.core.pack.task.operation.ResFilterFactory) -> rosetta.core.pack.task.operation.ResFilterFactory define_res_filter_xml_schema(...) from builtins.PyCapsule define_res_filter_xml_schema(self : rosetta.core.pack.task.operation.ResFilterFactory, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   The %ResFilterFactory is the point of entry for the definition of the XML Schemas  for every ResFilter that may be instantiated from a file.  It is  responsible for defining  an xs:group named "res_filter" listing each of the residue-filter-complex types that  may be initialized using the %ResFilterFactory and to iterate across each of the  ResFilterCreator it contains asking them for the XML schema of the ResFilter they  are responsible for creating. factory_register(...) from builtins.PyCapsule factory_register(self : rosetta.core.pack.task.operation.ResFilterFactory,  : rosetta.core.pack.task.operation.ResFilterCreator) -> NoneType get_instance(...) from builtins.PyCapsule get_instance() -> rosetta.core.pack.task.operation.ResFilterFactory has_type(...) from builtins.PyCapsule has_type(self : rosetta.core.pack.task.operation.ResFilterFactory,  : str) -> bool newResFilter(...) from builtins.PyCapsule newResFilter(*args, **kwargs) Overloaded function.   1. newResFilter(self : rosetta.core.pack.task.operation.ResFilterFactory,  : str) -> rosetta.core.pack.task.operation.ResFilter   return new ResFilter by key lookup in filter_map_; new ResFilter does not parse an input Tag   2. newResFilter(self : rosetta.core.pack.task.operation.ResFilterFactory,  : str, tag : utility::tag::Tag) -> rosetta.core.pack.task.operation.ResFilter   return new ResFilter by key lookup in filter_map_ new ResFilter parses Tag if provided res_filter_xml_schema_group_name(...) from builtins.PyCapsule res_filter_xml_schema_group_name() -> str   The name given to the XML schema group of all ResFilter s.   class ResLvlTaskOperation(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.ResLvlTaskOperation) -> NoneType   2. __init__(rosetta.core.pack.task.operation.ResLvlTaskOperation, rosetta.core.pack.task.operation.ResLvlTaskOperation) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType   Change a ResidueLevelTask in some way.  The input pose is the one to which the input  task will be later applied. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : rosetta.core.pack.task.operation.ResLvlTaskOperation) -> rosetta.core.pack.task.operation.ResLvlTaskOperation clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResLvlTaskOperation) -> rosetta.core.pack.task.operation.ResLvlTaskOperation   Create another task operation of the type matching the most-derived  version of the class. parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class ResLvlTaskOperationCreator(builtins.object)     The ResLvlTaskOperationCreator class's responsibilities are to create on demand a new ResLvlTaskOperation class. The ResLvlTaskOperationCreator must register itself with the ResLvlTaskOperationFactory at load time (before main() begins) so that the ResLvlTaskOperationFactory is ready to start creating ResLvlTaskOperations by the time any protocol requests one.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> NoneType   2. __init__(rosetta.core.pack.task.operation.ResLvlTaskOperationCreator, rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator,  : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperationCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation   Instantiate a new ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResLvlTaskOperationFactory(rosetta.utility.SingletonBase_core_pack_task_operation_ResLvlTaskOperationFactory_t)       Method resolution order: ResLvlTaskOperationFactory rosetta.utility.SingletonBase_core_pack_task_operation_ResLvlTaskOperationFactory_t builtins.object Methods defined here: __init__(self, /, *args, **kwargs) Initialize self.  See help(type(self)) for accurate signature. __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. add_creator(...) from builtins.PyCapsule add_creator(self : rosetta.core.pack.task.operation.ResLvlTaskOperationFactory,  : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> NoneType   add a prototype, using its default type name as the map key define_res_lvl_task_op_xml_schema(...) from builtins.PyCapsule define_res_lvl_task_op_xml_schema(self : rosetta.core.pack.task.operation.ResLvlTaskOperationFactory, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   The %ResLvlTaskOperationFactory is the point of entry for the definition of the XML Schemas  for every ResLvlTaskOperation that may be instantiated from a file.  It is  responsible for defining  an xs:group named "res_lvl_task_op" listing each of the residue-level-task-operation-complex  types that may be initialized using the %ResLvlTaskOperationFactory and to iterate across each of the  ResLvlTaskOperationCreator it contains asking them for the XML schema of the ResLvlTaskOperation they  are responsible for creating. factory_register(...) from builtins.PyCapsule factory_register(self : rosetta.core.pack.task.operation.ResLvlTaskOperationFactory,  : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> NoneType has_type(...) from builtins.PyCapsule has_type(self : rosetta.core.pack.task.operation.ResLvlTaskOperationFactory,  : str) -> bool newRLTO(...) from builtins.PyCapsule newRLTO(self : rosetta.core.pack.task.operation.ResLvlTaskOperationFactory,  : str) -> rosetta.core.pack.task.operation.ResLvlTaskOperation   return new ResLvlTaskOperation by key lookup in rlto_map_ (new ResLvlTaskOperation parses Tag if provided) res_lvl_task_op_xml_schema_group_name(...) from builtins.PyCapsule res_lvl_task_op_xml_schema_group_name() -> str   The name given to the XML schema group of all ResLvlTaskOperation s. Methods inherited from rosetta.utility.SingletonBase_core_pack_task_operation_ResLvlTaskOperationFactory_t: get_instance(...) from builtins.PyCapsule get_instance() -> core::pack::task::operation::ResLvlTaskOperationFactory   class ResidueHasProperty(ResFilter)     /////////////////////////////////////////////////////////////////////////////////////////////////     Method resolution order: ResidueHasProperty ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueHasProperty,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.ResidueHasProperty) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueHasProperty,  : rosetta.core.pack.task.operation.ResidueHasProperty) -> rosetta.core.pack.task.operation.ResidueHasProperty clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueHasProperty) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueHasProperty,  : utility::tag::Tag) -> NoneType property(...) from builtins.PyCapsule property(rosetta.core.pack.task.operation.ResidueHasProperty) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueHasPropertyCreator(ResFilterCreator)       Method resolution order: ResidueHasPropertyCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueHasPropertyCreator,  : rosetta.core.pack.task.operation.ResidueHasPropertyCreator) -> rosetta.core.pack.task.operation.ResidueHasPropertyCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueHasPropertyCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueHasPropertyCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueHasPropertyCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueIndexIs(ResFilter)       Method resolution order: ResidueIndexIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueIndexIs,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : int) -> NoneType   3. __init__(self : handle,  : rosetta.utility.vector1_unsigned_long) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueIndexIs,  : rosetta.core.pack.task.operation.ResidueIndexIs) -> rosetta.core.pack.task.operation.ResidueIndexIs clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueIndexIs) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t indices(...) from builtins.PyCapsule indices(rosetta.core.pack.task.operation.ResidueIndexIs) -> rosetta.utility.vector1_unsigned_long keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueIndexIs,  : utility::tag::Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueIndexIsCreator(ResFilterCreator)       Method resolution order: ResidueIndexIsCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueIndexIsCreator,  : rosetta.core.pack.task.operation.ResidueIndexIsCreator) -> rosetta.core.pack.task.operation.ResidueIndexIsCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueIndexIsCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueIndexIsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueIndexIsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueIndexIsnt(ResidueIndexIs)       Method resolution order: ResidueIndexIsnt ResidueIndexIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueIndexIsnt,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : int) -> NoneType   3. __init__(self : handle,  : rosetta.utility.vector1_unsigned_long) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueIndexIsnt,  : rosetta.core.pack.task.operation.ResidueIndexIsnt) -> rosetta.core.pack.task.operation.ResidueIndexIsnt clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueIndexIsnt) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResidueIndexIs: get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t indices(...) from builtins.PyCapsule indices(rosetta.core.pack.task.operation.ResidueIndexIs) -> rosetta.utility.vector1_unsigned_long parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueIndexIs,  : utility::tag::Tag) -> NoneType   class ResidueIndexIsntCreator(ResFilterCreator)       Method resolution order: ResidueIndexIsntCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueIndexIsntCreator,  : rosetta.core.pack.task.operation.ResidueIndexIsntCreator) -> rosetta.core.pack.task.operation.ResidueIndexIsntCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueIndexIsntCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueIndexIsntCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueIndexIsntCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueLacksProperty(ResidueHasProperty)       Method resolution order: ResidueLacksProperty ResidueHasProperty ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueLacksProperty,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.ResidueLacksProperty) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueLacksProperty,  : rosetta.core.pack.task.operation.ResidueLacksProperty) -> rosetta.core.pack.task.operation.ResidueLacksProperty clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueLacksProperty) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResidueHasProperty: get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueHasProperty,  : utility::tag::Tag) -> NoneType property(...) from builtins.PyCapsule property(rosetta.core.pack.task.operation.ResidueHasProperty) -> str   class ResidueLacksPropertyCreator(ResFilterCreator)       Method resolution order: ResidueLacksPropertyCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueLacksPropertyCreator,  : rosetta.core.pack.task.operation.ResidueLacksPropertyCreator) -> rosetta.core.pack.task.operation.ResidueLacksPropertyCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueLacksPropertyCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueLacksPropertyCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueLacksPropertyCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueName3Is(ResFilter)       Method resolution order: ResidueName3Is ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueName3Is,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(self : handle,  : rosetta.std.set_std_string_std_less_std_string_std_allocator_std_string_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueName3Is,  : rosetta.core.pack.task.operation.ResidueName3Is) -> rosetta.core.pack.task.operation.ResidueName3Is clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueName3Is) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueName3Is,  : utility::tag::Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueName3IsCreator(ResFilterCreator)       Method resolution order: ResidueName3IsCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueName3IsCreator,  : rosetta.core.pack.task.operation.ResidueName3IsCreator) -> rosetta.core.pack.task.operation.ResidueName3IsCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueName3IsCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueName3IsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueName3IsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueName3Isnt(ResidueName3Is)       Method resolution order: ResidueName3Isnt ResidueName3Is ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueName3Isnt,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(self : handle,  : rosetta.std.set_std_string_std_less_std_string_std_allocator_std_string_t) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueName3Isnt,  : rosetta.core.pack.task.operation.ResidueName3Isnt) -> rosetta.core.pack.task.operation.ResidueName3Isnt clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueName3Isnt) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResidueName3Is: get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueName3Is,  : utility::tag::Tag) -> NoneType   class ResidueName3IsntCreator(ResFilterCreator)       Method resolution order: ResidueName3IsntCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueName3IsntCreator,  : rosetta.core.pack.task.operation.ResidueName3IsntCreator) -> rosetta.core.pack.task.operation.ResidueName3IsntCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueName3IsntCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueName3IsntCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueName3IsntCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBIndexIs(ResFilter)       Method resolution order: ResiduePDBIndexIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResiduePDBIndexIs,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str,  : int) -> NoneType   3. __init__(self : handle,  : rosetta.utility.vector1_core_pack_task_operation_ResiduePDBIndexIs_ChainPos) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBIndexIs,  : rosetta.core.pack.task.operation.ResiduePDBIndexIs) -> rosetta.core.pack.task.operation.ResiduePDBIndexIs clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResiduePDBIndexIs) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t indices(...) from builtins.PyCapsule indices(rosetta.core.pack.task.operation.ResiduePDBIndexIs) -> rosetta.utility.vector1_core_pack_task_operation_ResiduePDBIndexIs_ChainPos keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResiduePDBIndexIs,  : utility::tag::Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBIndexIsCreator(ResFilterCreator)       Method resolution order: ResiduePDBIndexIsCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator,  : rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator) -> rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBIndexIsnt(ResiduePDBIndexIs)       Method resolution order: ResiduePDBIndexIsnt ResiduePDBIndexIs ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsnt,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str,  : int) -> NoneType   3. __init__(self : handle,  : rosetta.utility.vector1_core_pack_task_operation_ResiduePDBIndexIs_ChainPos) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsnt,  : rosetta.core.pack.task.operation.ResiduePDBIndexIsnt) -> rosetta.core.pack.task.operation.ResiduePDBIndexIsnt clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResiduePDBIndexIsnt) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResiduePDBIndexIs: get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t indices(...) from builtins.PyCapsule indices(rosetta.core.pack.task.operation.ResiduePDBIndexIs) -> rosetta.utility.vector1_core_pack_task_operation_ResiduePDBIndexIs_ChainPos parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResiduePDBIndexIs,  : utility::tag::Tag) -> NoneType   class ResiduePDBIndexIsntCreator(ResFilterCreator)       Method resolution order: ResiduePDBIndexIsntCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator,  : rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator) -> rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResiduePDBIndexIsntCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBInfoHasLabel(ResFilter)       Method resolution order: ResiduePDBInfoHasLabel ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel,  : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel) -> rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel) -> rosetta.core.pack.task.operation.ResFilter get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel,  : utility::tag::Tag) -> NoneType property(...) from builtins.PyCapsule property(rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBInfoHasLabelCreator(ResFilterCreator)       Method resolution order: ResiduePDBInfoHasLabelCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator,  : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator) -> rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabelCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResiduePDBInfoLacksLabel(ResiduePDBInfoHasLabel)       Method resolution order: ResiduePDBInfoLacksLabel ResiduePDBInfoHasLabel ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle,  : str) -> NoneType   3. __init__(handle, rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel,  : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel) -> rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabel) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(*args, **kwargs) Overloaded function.   1. keyname() -> str   2. keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(*args, **kwargs) Overloaded function.   1. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   2. provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResiduePDBInfoHasLabel: get_xml_schema_attributes(...) from builtins.PyCapsule get_xml_schema_attributes() -> rosetta.std.list_utility_tag_XMLSchemaAttribute_std_allocator_utility_tag_XMLSchemaAttribute_t parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel,  : utility::tag::Tag) -> NoneType property(...) from builtins.PyCapsule property(rosetta.core.pack.task.operation.ResiduePDBInfoHasLabel) -> str   class ResiduePDBInfoLacksLabelCreator(ResFilterCreator)       Method resolution order: ResiduePDBInfoLacksLabelCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator,  : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator) -> rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResiduePDBInfoLacksLabelCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueTypeFilter(ResFilter)       Method resolution order: ResidueTypeFilter ResFilter builtins.object Methods defined here: __call__(...) from builtins.PyCapsule __call__(self : rosetta.core.pack.task.operation.ResidueTypeFilter,  : rosetta.core.pose.Pose,  : int) -> bool __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, polar : bool, apolar : bool, aromatic : bool, charged : bool) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueTypeFilter,  : rosetta.core.pack.task.operation.ResidueTypeFilter) -> rosetta.core.pack.task.operation.ResidueTypeFilter clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.ResidueTypeFilter) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResidueTypeFilter,  : utility::tag::Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class ResidueTypeFilterCreator(ResFilterCreator)       Method resolution order: ResidueTypeFilterCreator ResFilterCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.ResidueTypeFilterCreator,  : rosetta.core.pack.task.operation.ResidueTypeFilterCreator) -> rosetta.core.pack.task.operation.ResidueTypeFilterCreator create_res_filter(...) from builtins.PyCapsule create_res_filter(rosetta.core.pack.task.operation.ResidueTypeFilterCreator) -> rosetta.core.pack.task.operation.ResFilter keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.ResidueTypeFilterCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.ResidueTypeFilterCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictAbsentCanonicalAAS(TaskOperation)       Method resolution order: RestrictAbsentCanonicalAAS TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, resid : int, keep_aas : rosetta.utility.vector1_bool) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType   if resid_ is zero, will apply RestrictAbsentCanonicalAAs to all residues  in the pose. O/w only to resid_ assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS,  : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS) -> rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS) -> rosetta.core.pack.task.operation.TaskOperation include_residue(...) from builtins.PyCapsule include_residue(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS, resid : int) -> NoneType keep_aas(...) from builtins.PyCapsule keep_aas(*args, **kwargs) Overloaded function.   1. keep_aas(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS, keep_aas : str) -> NoneType   a human-readible string-based mutator   2. keep_aas(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS, keep_aas : rosetta.utility.vector1_bool) -> NoneType   direct vector1-basd mutator.  If an amino acid is not present (false) in the boolean vector,  then do not allow it at this position.  The boolean vector is a 20-length vector in alphabetical  order by one-letter code. keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAAS,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictAbsentCanonicalAASCreator(TaskOperationCreator)       Method resolution order: RestrictAbsentCanonicalAASCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator,  : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator) -> rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictAbsentCanonicalAASRLT(ResLvlTaskOperation)       Method resolution order: RestrictAbsentCanonicalAASRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. aas_to_keep(...) from builtins.PyCapsule aas_to_keep(*args, **kwargs) Overloaded function.   1. aas_to_keep(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT,  : rosetta.utility.vector1_bool) -> NoneType   2. aas_to_keep(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT,  : str) -> NoneType apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT,  : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT) -> rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLT,  : rosetta.utility.tag.Tag) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictAbsentCanonicalAASRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: RestrictAbsentCanonicalAASRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator,  : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator) -> rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictAbsentCanonicalAASRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictResidueToRepacking(TaskOperation)     RestrictResidueToRepacking     Method resolution order: RestrictResidueToRepacking TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictResidueToRepacking,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictResidueToRepacking,  : rosetta.core.pack.task.operation.RestrictResidueToRepacking) -> rosetta.core.pack.task.operation.RestrictResidueToRepacking clear(...) from builtins.PyCapsule clear(rosetta.core.pack.task.operation.RestrictResidueToRepacking) -> NoneType clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictResidueToRepacking) -> rosetta.core.pack.task.operation.TaskOperation include_residue(...) from builtins.PyCapsule include_residue(self : rosetta.core.pack.task.operation.RestrictResidueToRepacking, resid : int) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.RestrictResidueToRepacking,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictResidueToRepackingCreator(TaskOperationCreator)       Method resolution order: RestrictResidueToRepackingCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator,  : rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator) -> rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictResidueToRepackingCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictToRepacking(TaskOperation)       Method resolution order: RestrictToRepacking TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.RestrictToRepacking) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictToRepacking, pose : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictToRepacking,  : rosetta.core.pack.task.operation.RestrictToRepacking) -> rosetta.core.pack.task.operation.RestrictToRepacking clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictToRepacking) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.RestrictToRepacking,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictToRepackingCreator(TaskOperationCreator)       Method resolution order: RestrictToRepackingCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictToRepackingCreator,  : rosetta.core.pack.task.operation.RestrictToRepackingCreator) -> rosetta.core.pack.task.operation.RestrictToRepackingCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.RestrictToRepackingCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictToRepackingCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictToRepackingCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictToRepackingRLT(ResLvlTaskOperation)       Method resolution order: RestrictToRepackingRLT ResLvlTaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictToRepackingRLT,  : rosetta.core.pack.task.ResidueLevelTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictToRepackingRLT,  : rosetta.core.pack.task.operation.RestrictToRepackingRLT) -> rosetta.core.pack.task.operation.RestrictToRepackingRLT clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictToRepackingRLT) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from ResLvlTaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.ResLvlTaskOperation,  : utility::tag::Tag) -> NoneType   parser xml-like tags to set class data/parameters   class RestrictToRepackingRLTCreator(ResLvlTaskOperationCreator)       Method resolution order: RestrictToRepackingRLTCreator ResLvlTaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator,  : rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator) -> rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator create_res_level_task_operation(...) from builtins.PyCapsule create_res_level_task_operation(rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator) -> rosetta.core.pack.task.operation.ResLvlTaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictToRepackingRLTCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RestrictYSDesign(TaskOperation)     RestrictYSDesign restricts positions to a binary Tyr/Ser alphabet     Method resolution order: RestrictYSDesign TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.RestrictYSDesign) -> NoneType   3. __init__(self : handle, resids : rosetta.utility.vector1_unsigned_long) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RestrictYSDesign,  : rosetta.core.pose.Pose, task : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictYSDesign,  : rosetta.core.pack.task.operation.RestrictYSDesign) -> rosetta.core.pack.task.operation.RestrictYSDesign clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RestrictYSDesign) -> rosetta.core.pack.task.operation.TaskOperation include_gly(...) from builtins.PyCapsule include_gly(self : rosetta.core.pack.task.operation.RestrictYSDesign, gly : bool) -> NoneType include_resid(...) from builtins.PyCapsule include_resid(self : rosetta.core.pack.task.operation.RestrictYSDesign, resid : int) -> NoneType keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class RestrictYSDesignCreator(TaskOperationCreator)       Method resolution order: RestrictYSDesignCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RestrictYSDesignCreator,  : rosetta.core.pack.task.operation.RestrictYSDesignCreator) -> rosetta.core.pack.task.operation.RestrictYSDesignCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.RestrictYSDesignCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RestrictYSDesignCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RestrictYSDesignCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class RotamerExplosion(TaskOperation)     rotamer explosion for a residue     Method resolution order: RotamerExplosion TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(self : handle, resid : int, sample_level : rosetta.core.pack.task.ExtraRotSample, chi : int) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.RotamerExplosion,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RotamerExplosion,  : rosetta.core.pack.task.operation.RotamerExplosion) -> rosetta.core.pack.task.operation.RotamerExplosion chi(...) from builtins.PyCapsule chi(self : rosetta.core.pack.task.operation.RotamerExplosion, c : int) -> NoneType clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.RotamerExplosion) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.RotamerExplosion,  : rosetta.utility.tag.Tag,  : rosetta.basic.datacache.DataMap) -> NoneType provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType resid(...) from builtins.PyCapsule resid(self : rosetta.core.pack.task.operation.RotamerExplosion, r : int) -> NoneType sample_level(...) from builtins.PyCapsule sample_level(self : rosetta.core.pack.task.operation.RotamerExplosion, s : rosetta.core.pack.task.ExtraRotSample) -> NoneType   class RotamerExplosionCreator(TaskOperationCreator)       Method resolution order: RotamerExplosionCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.RotamerExplosionCreator,  : rosetta.core.pack.task.operation.RotamerExplosionCreator) -> rosetta.core.pack.task.operation.RotamerExplosionCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.RotamerExplosionCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.RotamerExplosionCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.RotamerExplosionCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class SetRotamerCouplings(TaskOperation)       Method resolution order: SetRotamerCouplings TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.SetRotamerCouplings) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.SetRotamerCouplings,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.SetRotamerCouplings,  : rosetta.core.pack.task.operation.SetRotamerCouplings) -> rosetta.core.pack.task.operation.SetRotamerCouplings clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.SetRotamerCouplings) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType set_couplings(...) from builtins.PyCapsule set_couplings(self : rosetta.core.pack.task.operation.SetRotamerCouplings, couplings : rosetta.core.pack.rotamer_set.RotamerCouplings) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class SetRotamerCouplingsCreator(TaskOperationCreator)       Method resolution order: SetRotamerCouplingsCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.SetRotamerCouplingsCreator,  : rosetta.core.pack.task.operation.SetRotamerCouplingsCreator) -> rosetta.core.pack.task.operation.SetRotamerCouplingsCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.SetRotamerCouplingsCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.SetRotamerCouplingsCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.SetRotamerCouplingsCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class SetRotamerLinks(TaskOperation)       Method resolution order: SetRotamerLinks TaskOperation builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(handle) -> NoneType   2. __init__(handle, rosetta.core.pack.task.operation.SetRotamerLinks) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.SetRotamerLinks,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.SetRotamerLinks,  : rosetta.core.pack.task.operation.SetRotamerLinks) -> rosetta.core.pack.task.operation.SetRotamerLinks clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.SetRotamerLinks) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname() -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType set_links(...) from builtins.PyCapsule set_links(self : rosetta.core.pack.task.operation.SetRotamerLinks, links : rosetta.core.pack.rotamer_set.RotamerLinks) -> NoneType Methods inherited from TaskOperation: parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class SetRotamerLinksCreator(TaskOperationCreator)       Method resolution order: SetRotamerLinksCreator TaskOperationCreator builtins.object Methods defined here: __init__(...) from builtins.PyCapsule __init__(handle) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.SetRotamerLinksCreator,  : rosetta.core.pack.task.operation.SetRotamerLinksCreator) -> rosetta.core.pack.task.operation.SetRotamerLinksCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.SetRotamerLinksCreator) -> rosetta.core.pack.task.operation.TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.SetRotamerLinksCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.SetRotamerLinksCreator, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   class TaskOperation(builtins.object)       Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.TaskOperation, rosetta.core.pack.task.operation.TaskOperation) -> NoneType   2. __init__(rosetta.core.pack.task.operation.TaskOperation) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. apply(...) from builtins.PyCapsule apply(self : rosetta.core.pack.task.operation.TaskOperation,  : rosetta.core.pose.Pose,  : rosetta.core.pack.task.PackerTask) -> NoneType   Change a packer task in some way.  The input pose is the one to which the input  task will be later applied. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.TaskOperation,  : rosetta.core.pack.task.operation.TaskOperation) -> rosetta.core.pack.task.operation.TaskOperation clone(...) from builtins.PyCapsule clone(rosetta.core.pack.task.operation.TaskOperation) -> rosetta.core.pack.task.operation.TaskOperation   Create another task operation of the type matching the most-derived  version of the class. parse_tag(...) from builtins.PyCapsule parse_tag(self : rosetta.core.pack.task.operation.TaskOperation,  : utility::tag::Tag,  : rosetta.basic.datacache.DataMap) -> NoneType   Used to parse an xml-like tag to load parameters and properties.   class TaskOperationCreator(builtins.object)     The TaskOperationCreator class's responsibilities are to create on demand a new TaskOperation class. The TaskOperationCreator must register itself with the TaskOperationFactory at load time (before main() begins) so that the TaskOperationFactory is ready to start creating TaskOperations by the time any protocol requests one.     Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.pack.task.operation.TaskOperationCreator) -> NoneType   2. __init__(rosetta.core.pack.task.operation.TaskOperationCreator, rosetta.core.pack.task.operation.TaskOperationCreator) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.TaskOperationCreator,  : rosetta.core.pack.task.operation.TaskOperationCreator) -> rosetta.core.pack.task.operation.TaskOperationCreator create_task_operation(...) from builtins.PyCapsule create_task_operation(rosetta.core.pack.task.operation.TaskOperationCreator) -> rosetta.core.pack.task.operation.TaskOperation   Instantiate a new TaskOperation keyname(...) from builtins.PyCapsule keyname(rosetta.core.pack.task.operation.TaskOperationCreator) -> str provide_xml_schema(...) from builtins.PyCapsule provide_xml_schema(self : rosetta.core.pack.task.operation.TaskOperationCreator, xsd : utility::tag::XMLSchemaDefinition) -> NoneType   class TaskOperationFactory(builtins.object)       Methods defined here: __init__(self, /, *args, **kwargs) Initialize self.  See help(type(self)) for accurate signature. __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. add_creator(...) from builtins.PyCapsule add_creator(*args, **kwargs) Overloaded function.   1. add_creator(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.core.pack.task.operation.TaskOperationCreator) -> NoneType   add a prototype, using its default type name as the map key   2. add_creator(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.core.pack.task.operation.ResLvlTaskOperationCreator) -> NoneType   pass through to child factories   3. add_creator(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.core.pack.task.operation.ResFilterCreator) -> NoneType assign(...) from builtins.PyCapsule assign(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.core.pack.task.operation.TaskOperationFactory) -> rosetta.core.pack.task.operation.TaskOperationFactory define_task_op_xml_schema(...) from builtins.PyCapsule define_task_op_xml_schema(self : rosetta.core.pack.task.operation.TaskOperationFactory, xsd : rosetta.utility.tag.XMLSchemaDefinition) -> NoneType   The %TaskOperationFactory is the point of entry for the definition of the XML Schemas  for every TaskOperation that may be instantiated from a file. It is  responsible for defining  an xs:group named "task_operation" listing each of the task-operation-complex types that  may be initialized using the %TaskOperationFactory and to iterate across each of the  TaskOperationCreator s it contains asking them for the XML schema of the TaskOperation they  are responsible for creating. factory_register(...) from builtins.PyCapsule factory_register(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.core.pack.task.operation.TaskOperationCreator) -> NoneType get_instance(...) from builtins.PyCapsule get_instance() -> rosetta.core.pack.task.operation.TaskOperationFactory has_type(...) from builtins.PyCapsule has_type(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : str) -> bool newTaskOperation(...) from builtins.PyCapsule newTaskOperation(*args, **kwargs) Overloaded function.   1. newTaskOperation(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : str, datamap : rosetta.basic.datacache.DataMap) -> rosetta.core.pack.task.operation.TaskOperation   return new TaskOperation by key lookup in task_operation_creator_map_ (new TaskOperation parses Tag if provided)   2. newTaskOperation(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : str, datamap : rosetta.basic.datacache.DataMap,  : rosetta.utility.tag.Tag) -> rosetta.core.pack.task.operation.TaskOperation   return new TaskOperation by key lookup in task_operation_creator_map_ (new TaskOperation parses Tag if provided) newTaskOperations(...) from builtins.PyCapsule newTaskOperations(*args, **kwargs) Overloaded function.   1. newTaskOperations(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_TaskOperation_t, datamap : rosetta.basic.datacache.DataMap,  : rosetta.utility.tag.Tag) -> NoneType   fills vector with new TaskOperations from nested "TASKOPERATIONS" TagCOP   2. newTaskOperations(self : rosetta.core.pack.task.operation.TaskOperationFactory,  : rosetta.utility.vector1_std_shared_ptr_core_pack_task_operation_TaskOperation_t, datamap : rosetta.basic.datacache.DataMap,  : str) -> NoneType   fills vector with new TaskOperations from xml-like tag file task_operation_xml_schema_group_name(...) from builtins.PyCapsule task_operation_xml_schema_group_name() -> str